KEGG   Yarrowia lipolytica: YALI0C00913g
Entry
YALI0C00913g      CDS       T01033                                 
Name
(RefSeq) YALI0C00913p
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
yli  Yarrowia lipolytica
Pathway
yli03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    YALI0C00913g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:yli03009]
    YALI0C00913g
Ribosome biogenesis [BR:yli03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    YALI0C00913g
SSDB
Motif
Pfam: WD40 Utp12 NBCH_WD40 ANAPC4_WD40 WD40_like WDR54 PROPPIN eIF2A Nup160
Other DBs
NCBI-GeneID: 2909173
NCBI-ProteinID: XP_501306
UniProt: Q6CDF6
Position
C:complement(126222..128960)
AA seq 912 aa
MVKSYNRFEAEAVFGVVSSSNALWLKNSNSSTGRAVTGALETVLAWDIKAGTCVQKLSDS
DLAVGTGATVATASPPVVSVLTNYFSELLAAGYTDGSIRVFDYRSGQVMTTFKGHKSSIT
CLEFDASGTRLVSGSRDSNVILWDLVEEVGVSRLRSHRDQVTGVKFLDEKKLITCAKDGL
VKIWDLESRDCIETRVGGSEVWAMDVYSDTVMTVGREKEVKVWQVDLDAKDGEMLSQRGS
LERVSNDRGIDIEFSKDGGHVIFSGNDKTVELWRRRTLAEIKKSIAKKIKRRVKKGDTVD
EDEYDEKSVNEIWVQVVNFKTSAKIRNVTWTGSESVSGANKDAAGLLVALTNNSLEYYTL
ELEDGKFSRDHVIDLCGHRADIRALSLSSDDKMVASTSNGQLKIWNLRTTNCIRSMDCGY
ALCVKFLPGDSLVIVGTKSGQIQLFDVASSSLIDTVDAHEGSLWSCDVSSDGKTVVTGGS
DKRVCFWELAVSSETVPGTGETTQKLKLKQTRVLELSDDVLCVTLSSDNKYIACSLLDST
VKVFFFDSLKFYLNLYGHKLPVLAMDISSDSNIIVTCSADKNIKLWGLDFGDCRKSLFGH
ADSVMSVKFVPGSHNFFSAGKDRLVKYWDGDKFDCIQRLVGHVGEVWALCVSSAGDFIVS
GSHDKSIRVWMESDDEIFLEEEREKELEEMYESTLAVSLEGEGQELDEDDKEDAVVDKVH
MQTGETLKGGEKLMEALEMGTEDLDLIENWKIAQATNPNAACPPRHVILATLKLSAERHV
LNVVEKIKPAQLEDSLLVLPFSHVMKLVRFIQIWTAKEWSIPLVCRVLFFVTRTHHKQIV
ASRELKPMLEEVRHNIRKCLARQKSEIGYNLAGLRFIKQNWDLHHKKEFIDAVEAKEAEE
RSQKKRAFGTVV
NT seq 2739 nt   +upstreamnt  +downstreamnt
atggtaaaatcatacaaccgattcgaggccgaggccgtgtttggcgtcgtgtcgtcgagc
aatgcgctgtggctgaaaaattcaaattccagtactggacgggccgtgacaggggctcta
gagacagttctggcctgggacatcaaggccggaacctgtgttcagaagctgtcagacagc
gatctggcagtcggaacaggtgccacggtggcaactgcgtctcctccggttgtttctgtg
ctgacaaactatttttccgaactgctagctgcgggatacaccgacggcagtatccgggtg
tttgactatcgatctggccaggtaatgaccaccttcaagggccacaagtcttcaatcaca
tgtctcgagtttgacgcaagtggaacccggcttgtttccggctcgcgtgactccaacgtg
attctgtgggacctagttgaagaggtgggcgtgtctcgactgcgatcccaccgagaccag
gtgacgggagtcaagttcctagacgaaaagaaactcatcacgtgcgccaaggacggcttg
gtcaagatctgggacctggagtcacgtgactgcatcgagacgcgggtgggcggctccgag
gtgtgggccatggacgtttacagcgacaccgtcatgactgtggggcgagaaaaggaggtc
aaggtctggcaggtggatttggacgccaaggacggcgagatgctctctcagcgcggttct
ctggagcgggtttccaacgaccgaggcatcgatatcgagttttccaaggacggcggccat
gtcatcttttccggtaacgataagactgtggaattgtggcgacgacgaactttggccgag
atcaagaaatctattgctaagaaaatcaaacgtcgagtcaagaagggtgatactgttgac
gaagacgagtacgacgagaagtcggtcaacgagatctgggtgcaggtggtcaacttcaag
acatctgccaagatcagaaacgtgacgtggacgggatcagaatcggtgtctggcgccaac
aaggacgccgcaggcctgctggtggcgctcacaaacaactctctggagtactacaccctc
gagttggaggacggcaagtttagccgggatcacgtgatcgatctgtgcggccaccgcgcc
gacattcgggctctgtctctttcttctgatgacaagatggtggcctccacctccaacggt
cagctcaaaatctggaatctcagaaccacaaactgcattcggtccatggactgtgggtat
gctctgtgtgtcaagtttctgcctggagactcgctggtgattgttggaaccaagtctgga
cagatccagctgtttgatgttgcttcctcgtctctcattgacactgtagatgcccatgag
ggatctctgtggtcttgtgacgtttccagtgacggcaaaaccgtggttacgggtggatct
gataagcgggtgtgtttctgggagctggctgtttcctcggagaccgttcccggtactgga
gagaccactcagaagctgaagctgaagcagacccgtgttctggagctgtccgacgacgtt
ctgtgcgtcactctatcgtcagataacaagtacattgcctgctctctgctggactcgact
gttaaagtctttttcttcgactcgctcaagttctacctcaacttgtacggccacaagctg
cctgttttggccatggacatttccagcgattccaacatcatcgtcacatgttcggccgac
aagaacatcaagctgtggggtctggactttggagactgtcgaaagtctctgtttggacac
gccgactcggtcatgagcgtcaagtttgtacccgggtctcacaacttcttttcggcagga
aaagacaggctggtcaagtactgggacggagacaagtttgactgcatccagcggctggtg
ggccacgtcggcgaggtctgggccctctgcgtgtcgtctgccggtgactttattgtctcc
ggttcgcatgataagagtatccgagtgtggatggagtccgatgacgaaatcttcctcgaa
gaagaacgagaaaaggagctcgaggaaatgtatgagtccacactcgccgtgtctctcgag
ggagagggccaggagctcgacgaagatgacaaggaagacgcggtcgtggataaagtgcat
atgcagactggagagacgctcaagggcggagaaaagctcatggaggcgctggaaatggga
accgaggacctggacctgatcgaaaactggaagattgcccaggcaaccaaccccaacgcg
gcctgccctccccgtcacgtgattctcgccacgctgaagctgtctgccgagcgacacgtt
ctcaacgttgttgagaagatcaagccagcgcagctggaggactcattgctggtgctgccc
ttcagccacgtgatgaagctggtgcggttcatccagatctggaccgccaaggagtggtct
attcctcttgtgtgtcgggttctctttttcgtgactcgaactcaccataagcagattgtg
gcttcccgggagctcaagcccatgctggaggaggtgcgacacaacattcgaaagtgcctg
gctcgtcaaaagtccgagattggctacaacctggccggtctgcggttcatcaagcaaaac
tgggacctgcatcataagaaggagtttatcgacgctgtggaggccaaggaggccgaggag
agatcgcagaagaagcgtgcttttggcacggttgtttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (47)   

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