KEGG   Yersinia pseudotuberculosis YPIII (serotype O 3): YPK_4110
Entry
YPK_4110          CDS       T00665                                 
Name
(GenBank) ABC transporter related
  KO
K13409  ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
Organism
ypy  Yersinia pseudotuberculosis YPIII (serotype O:3)
Pathway
ypy02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ypy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    YPK_4110
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ypy01002]
    YPK_4110
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ypy02000]
    YPK_4110
   02044 Secretion system [BR:ypy02044]
    YPK_4110
Peptidases and inhibitors [BR:ypy01002]
 Cysteine peptidases
  Family C39
   YPK_4110
Transporters [BR:ypy02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    YPK_4110
Secretion system [BR:ypy02044]
 Type I secretion system
  RaxAB-RaxC type I secretion system protein
   YPK_4110
SSDB
Motif
Pfam: ABC_membrane Peptidase_C39 ABC_tran SMC_N AAA_21 AAA_29 AAA_16 AAA_14 AAA SbcC_Walker_B AAA_22 NTPase_1 Peptidase_C70 nSTAND3 NACHT AAA_24 RsgA_GTPase AAA_30 Mg_chelatase ATPase_2 Guanylate_cyc_2 AAA_23 NB-ARC DUF87 TsaE AAA_28
Other DBs
NCBI-ProteinID: ACA70369
UniProt: A0A0H3B992
Position
4542009..4544123
AA seq 704 aa
MNDTHFNEIKNRLNFSFRRKVPQVLQTEAAECGLACLVMACRYHGMDIDLFNLRQRFGIS
SHGATLALLINISAQLKFKTRALSLDLDELRQLKTPCILHWDMSHFVVLVAVKGTRFIIH
DPAFGRRTVSLSEMSQHFTGVALELWPDSEFTRQKSRTRLSLLSLMRNISGLPGFLTKIF
CLSLMVEAINLLLPVGTQLVMDHVIIAEDHDLLALICIGLLFFILFRTFLSMLRSWTSLV
MGSLVDVQWKAGLFDHLLKLPLAYFEKRKLGDIQSRFGSLDIIRSTLTNNVVNGIIDGLM
SIGVFIMMFLYGGWLVWVVLGFTAMYMILRLATYNQYRQASEEQIVKNAKASSHFMETLY
GISTLKALGLAATRSQFWLNLNIDTTNANIRLTKLDMFFGGVNTLIGTIDQVVILWLGAS
MVIDGQMTLGMFVAFNAYRGQFSDRATNLINMVLQLRMLALHSERIADIVFTETEKEQTP
RQLLSPNQPAVFEARNIAFQYDNLSKPIFSDLNIHVEAGESVAITGPSGIGKTTLMKVIA
GLLTPSQGHILIDGLDITTVGLNNYRDCIACVLQDDKLFAGSIADNIASFDVNKDEQRIL
SCANHCNIHKEIMHMPMGYETLISELGGSLSGGQKQRLLIARALYRQPSLLFLDEATSHL
DLANEAHINNAIASLKITRIFIAHRPSTIASAQRIINLEKQNVS
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgaatgatacgcattttaacgagataaaaaaccgtctgaattttagctttcgtcgtaaa
gtcccacaggtgcttcaaaccgaagcagcagaatgcggacttgcctgtctggtaatggca
tgccgctaccatgggatggatatagatttatttaatttacgccaacgttttggtatttct
tctcatggcgcaacattagcgctattaattaatatatcagcacaacttaagtttaaaacc
cgtgctttatcactggatttagatgagttacgccaattaaaaacaccctgtatattgcat
tgggatatgagccattttgtcgtccttgttgcagtgaagggcacccggtttattattcac
gacccggcatttggccggcgtactgtcagcctaagtgagatgtcacagcattttaccggt
gtcgcactggaattatggcctgacagtgaatttacccgccaaaaaagccgtacccgttta
agcctattatcactgatgcgtaatatcagcggcttacctggctttctgacaaaaatattt
tgcttatcgttaatggtcgaggccattaacctactgctaccggtaggaactcagttggtc
atggaccatgtgatcattgccgaggaccatgacctattagcattgatttgtatcggcctg
cttttctttattctgttccgcacgtttttaagtatgttgcgatcgtggacatcgctggtt
atggggtctttagttgatgtgcaatggaaggcgggtttatttgatcatctactcaaatta
cctttggcttattttgaaaaacgtaaactgggcgatattcagtcacggtttggctccctc
gatatcatacgttcaacattaaccaacaatgtggtcaacggcatcattgacggtctaatg
tctattggcgtgtttatcatgatgtttttgtatggtggctggctggtttgggtggtactt
ggttttaccgccatgtacatgatcctgcgccttgccacttataatcaataccgtcaggct
tccgaagagcaaattgtaaaaaatgccaaagccagctctcattttatggaaacactttat
ggcatcagtacgcttaaggccctggggctggcagcaacacgctcacaattttggctcaat
ctaaacatagacacgaccaatgccaatatccgactgactaagttagatatgttttttggc
ggcgtaaacacactgatcggcaccatcgatcaagttgtcatcttatggctaggcgcgtcg
atggtgattgatgggcaaatgacattaggtatgtttgttgcctttaatgcttatcgggga
caattttctgatcgggcaaccaacttgatcaatatggtgttgcaactccgtatgcttgcc
ttgcacagtgagcgtattgccgacattgttttcaccgaaaccgaaaaagaacagaccccc
agacaactgctttcacccaatcaacctgcggtctttgaagctcgaaacattgcttttcaa
tatgacaatctgtcaaaacctattttttctgatttgaacattcacgttgaagcgggtgag
agtgtggcgattactggcccatcgggtataggaaaaaccacgttgatgaaagtgatagcc
gggctgctgacaccttcacaggggcatattctgattgatgggctggatataacgacggtc
ggcctgaataattatcgtgattgcattgcctgcgtgctccaggatgacaagctgttcgca
ggttccatcgctgacaacattgccagttttgatgtcaacaaagatgagcagcgtattctt
tcctgtgctaatcattgcaatatacataaagaaattatgcatatgccgatgggttatgaa
acgttgattagtgagcttggaggcagtttatcgggcgggcagaagcaacgtttattgatt
gccagagcgttgtatcgtcaacctagtttactgtttctggacgaggcaacaagtcatctg
gacttagcaaacgaagcacatatcaataatgcgatagcctcactgaagatcacccgtatt
tttatcgcccatcgtccttcaacgatagccagtgcccagcgtattattaatctggaaaaa
caaaacgtatcgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (36)   

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