KEGG   Yersinia pestis Z176003: YPZ3_1609
Entry
YPZ3_1609         CDS       T01210                                 
Name
(GenBank) N-terminal fragment of inner membrane permease
  KO
K12530  ATP-binding cassette, subfamily B, bacterial RtxB
Organism
ypz  Yersinia pestis Z176003
Pathway
ypz02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ypz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    YPZ3_1609
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ypz02000]
    YPZ3_1609
   02044 Secretion system [BR:ypz02044]
    YPZ3_1609
Transporters [BR:ypz02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    YPZ3_1609
Secretion system [BR:ypz02044]
 Type I secretion system
  RTX toxin transporter
   YPZ3_1609
SSDB
Motif
Pfam: ABC_membrane ABC_tran AAA_16 AAA_18 AAA_22 Zeta_toxin AAA_5 DUF87 AAA_33 PRK APS_kinase Cytidylate_kin AAA_21 AAA_29 AAA_30 CPT AAA_28 Mg_chelatase AAA_17 Pex24p
Other DBs
NCBI-ProteinID: ADE64519
Position
complement(2087325..2089109)
AA seq 594 aa
MENHVHSALICASRLIRLAGLNPMDIETFSQKVAIDTSVKTTLASLQRYIVQFSQTASVR
FKIRKQALEKIRQEQLPLAFRDRQGNFILLARMNEQQVLLQYADDKKPQMLSYQSLADMW
GGMILCCSHSRFDIRWFIPPLRRHRKPLMQVLLLSLLLQFLALISPLFFQVIMDKVLVHH
ALTTLEVLIFILVIVGVYEVILKGLREYIFTHTTTRVDILLGGKLFQHLIRLPLSYFKQR
HVGNIVARVRELDNIRDFITGSALTLCVDVVFTLVLFIVMWCISPLLTLIILSTLPFYLL
LAVMTTRPLQKKVEALCGFAAQNGAFLTETVSGVETVKSLALEPRMRQRWESQTRDFAQA
NFQVQNLQNLSSQAAQLLQKVAGALVIVIGAYHVMSVQLSIGQLIAFNMLALQALMPMSK
LVDLWQQSIRAQVGLKLISDILSLPVEPEADPAAPHPAISGNILLKNVAFRYRPDLDPVL
HDLNLSIRAGEHIGLVGPSGSGKSTVARLLQRLYNTEQGVITIDGYPINHLSPEYLRRQV
GVVMQESYLFNRTVRENIAHSRPTATLTEVVNAASLAGANAFILALRESPDLNF
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggaaaatcatgttcattccgcgctgatatgtgcatccagactgattcggttggccggg
ttaaatccaatggatatcgagacatttagccaaaaggtcgccatagacacctcagtaaaa
acaacgctagcgtctcttcagcgttatatcgttcaattttcacaaacagcttctgtccgt
tttaaaatacgtaagcaagcattggaaaaaataaggcaggagcagttaccgctggcattt
cgtgaccgtcaggggaattttatcttgctggcgcggatgaatgaacaacaagtgttatta
cagtacgctgatgataaaaaaccacaaatgttaagttatcaatcacttgctgacatgtgg
ggtggaatgatcttatgctgtagtcattcgcgctttgatattcgctggtttatcccgcca
ctacgtcgccatcgtaagccattaatgcaagtcctattgttatcattattgctgcaattc
ctagcgttgatctcccctctcttttttcaagttatcatggacaaagtactcgttcatcat
gcattaaccacactggaagtgctaatcttcatcttagtcattgtcggtgtgtatgaggtt
atattaaaaggcttgcgagaatatattttcacgcatacgacaacacgagtggatatatta
ttaggcgggaagttgtttcaacatttaatcaggttgccgttaagttactttaaacaacgt
catgtcggtaatattgttgccagagtccgtgagttagataatatccgtgatttcatcacg
ggttcggccctgacattatgtgttgatgtggtttttaccctcgtgttgtttattgttatg
tggtgtatatccccgttattaaccttaataatactgagcacgttgcctttttatctgtta
ttggccgtgatgaccactcggccgttgcaaaaaaaagtagaagctctctgtggttttgcc
gcgcaaaacggcgcgtttttgactgaaacggtgtctggggtggaaaccgtaaaaagtttg
gcgctggagccacggatgcgccagcgctgggaaagccaaactcgtgattttgctcaggct
aattttcaggtacaaaatttgcaaaatctcagtagccaagcggctcaactcttgcaaaag
gtggctggcgcactggtgatcgtgataggtgcgtatcacgttatgtctgtacagctcagt
attggtcagttgattgcatttaatatgttggcactacaggcattaatgccgatgagtaaa
ctggttgatttatggcagcagagcatccgtgctcaggttgggctgaaattaatatcagat
attctaagcttgccggttgaaccggaggcagatccggcggccccgcaccctgcgattagc
ggcaatatcctactaaaaaatgtggccttccgttatcgccccgatcttgatcctgtctta
catgatttaaacttatctatccgcgcgggtgaacatatcgggttggtggggccgtcagga
tcggggaaaagcaccgtggcccggttattacaacggctctataacaccgaacaaggggtc
attacgatagatggttatccgatcaaccatttatcaccagaatatttacggcgacaagtg
ggggtggtgatgcaggaaagctatctgtttaaccgcaccgtgcgagaaaatattgcccat
tcacggccaacagccaccttgaccgaggtggtcaatgccgccagtttagcgggtgctaac
gcctttattttggcgctacgcgaatccccggatcttaatttttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system