KEGG   Astyanax mexicanus (Mexican tetra): 103027219
Entry
103027219         CDS       T05042                                 
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma isoform X2
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103027219 (papolg)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103027219 (papolg)
Enzymes [BR:amex01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     103027219 (papolg)
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     103027219 (papolg)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2 DUF4269 Toxin-deaminase
Other DBs
NCBI-GeneID: 103027219
NCBI-ProteinID: XP_007252301
Ensembl: ENSAMXG00000004611
UniProt: W5KAY4
Position
7
AA seq 744 aa
MREMSATSNNMLSGQQPQKHYGITSSISLAFPREIDRLYTQKLIEAMKPFGVFEDEDELN
HRLAVLGKLNSFVKEWISEISETKNLPPSALMNVGGKIFTFGSYRLGVHTKGADIDALCV
APRHVERSDFFSSFFEKLKQHDEIRDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIP
DNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILHLVPDKENFRLTLRAIKLWAKSRGIYSN
MLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLTITDEILQGKADWS
KLFEPPNFFQKYKHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEYITLAHVNPQ
SFPWSKENRNENEFVSMWFIGINFKKLENADCVNIDLTYDIQSFTDTVYRQASNINMLKD
GMTIEATHVKKKQLHQYLPAELVHKSKKKSLGDLNRSSSGGGSKRCSLDGSQLDSSRDTD
SGTPFSSPTPVCKPCNSVSTPEESITPSKPPVPLYVDTSPACESSPKEEQGLSIPVIGAS
DAKPSVTLVATEAPVGSTIPTVVGRNIIPRMSPPDLPNGLNGAAPKRPHSPSLEEPPKKL
KDTEQMLSDDSAFKEPYPPTSNGLDQGDDQAAELHSTTKPMPIPTIDTSRTQRLPSKELP
DASSPVPTSNLRVIKNSIRLTLNR
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgagagaaatgtcagcaaccagtaacaatatgcttagcgggcagcagcctcagaaacat
tatgggattacatcctcgatcagcctggcctttcccagagagattgaccgcctgtacact
cagaagctcatagaggccatgaaaccttttggagtgtttgaggatgaggatgagcttaat
cacaggcttgctgttcttggaaagctgaattcatttgtgaaagagtggatctcagagatc
agtgaaacaaagaatctgcctccttcagctttaatgaatgttggaggcaaaatctttacc
tttggatcttacagactgggggtgcacacaaaaggtgcggatatagatgctctttgtgta
gcacctcgtcatgttgagaggagtgactttttctcatctttctttgaaaaattgaaacag
cacgatgagatcagggaccttcgggctgtggaagatgcgtttgtaccagtgatcaaattt
aaatttgatggtattgagattgatctgctttttgcaagacttgccctgcagtctattcct
gataacctggacctgagaggagactctctgcttagaaacctggacattaggtgtattcgg
agtctaaacggttgccgtgtgactgacgagatcctgcacttggttcctgataaagaaaac
ttccgactgactttgagagccatcaaactgtgggctaagagtcgtggaatctactccaac
atgcttggcttcctaggtggtgtgtcctgggccatgctggtggctagaacttgccagctt
tacccgaatgcagtggctgccacccttgtgcacaagttcttccttgtcttttccaaatgg
gagtggcccaaccctgtgcttttaaaacagcctgaagacagcaacttgaatctgcctgtc
tgggacccgcgagtgaacccctcagacaggtaccatttaatgccaatcatcacaccagca
tacccccagcagaactccacatacaatgtctccacctccacacgtaccatcatgagcgag
gaattcaaatatggccttacaattacagatgaaatccttcagggtaaggcggactggtcc
aagttgtttgagccaccgaacttcttccagaagtacaaacattatatcgtcctcactgcc
agtgcatccactgaggagaaccacttggaatgggttgggttggtggagtcgaagatcaga
gttcttgtagggaatttggagcgcaatgaatacatcactcttgcgcatgtaaaccctcag
tcgttcccctggtcaaaagagaaccgcaacgagaatgaatttgtctcgatgtggtttatt
ggaatcaacttcaaaaaactggagaatgctgattgtgtgaacattgacctgacttatgac
atccagtcctttacagacactgtctacaggcaggccagcaacatcaacatgttgaaggat
gggatgaccatcgaagctacacatgtgaagaagaagcagctgcaccagtaccttcctgct
gaactggtgcacaagagcaagaagaagagccttggagatctaaaccgcagttcgagtggt
gggggttcaaaacgctgttcgctggatggcagtcagcttgatagttccagagatacagat
tcaggcacccccttcagctcccccaccccagtctgtaaaccgtgcaactctgtgtccacc
cctgaggaaagcattactccttccaagcctccagtgccattatatgtggatacctcccca
gcctgtgaatcttctccaaaggaggagcagggattgtccataccagtcattggagccagt
gatgcaaaaccttcagtcacactggtggccacagaagcaccggtaggcagcactattccc
acggtggttggtcgaaacatcattccgcgtatgagcccacctgacctgcccaatggcctg
aatggagctgcccctaagagaccccactcaccctctctggaggagcctcctaagaaactc
aaagacacagagcagatgctgtcagatgattctgcatttaaagaaccatacccacctacc
agtaatgggctggatcaaggagatgaccaagcagcagagcttcattcaacgacaaagcct
atgcctattccaactattgatacatcaaggacacagagactgcccagtaaggagctgcca
gatgcctcttccccagttcccacaagcaaccttcgcgtaataaagaactcaatcagactg
actctcaaccggtag

  All links  
Gene (25)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (38)   

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