KEGG   Apteryx rowi (Okarito brown kiwi): 112976109
Entry
112976109         CDS       T07573                                 
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
arow  Apteryx rowi (Okarito brown kiwi)
Pathway
arow04382  Cornified envelope formation
arow04510  Focal adhesion
arow04512  ECM-receptor interaction
arow04518  Integrin signaling
arow04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:arow00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112976109 (COL4A4)
   04518 Integrin signaling
    112976109 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112976109 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112976109 (COL4A4)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    112976109 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arow04147]
    112976109 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:arow00536]
    112976109 (COL4A4)
Exosome [BR:arow04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   112976109 (COL4A4)
Glycosaminoglycan binding proteins [BR:arow00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   112976109 (COL4A4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 112976109
NCBI-ProteinID: XP_025942791
Position
Unknown
AA seq 1681 aa
MALTKDSSEWIKQIITAAWWLLIVFSVQEIDGGEYAYIDPCGGQDCSVCRCFPEKGSRGQ
PGELGAQGPIGSLGSTGPAGLPGEKGWRGETGQPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGSEGPTGKRGLDGCNGSRGDPGFPGENGYIGPRGPYGYPGQKGEKGNSIYVSHFGKGPP
GDRGDPGPPGMPGPRGSRGTTGPHGYPGQPGLPGVPGFPGLPGEQGNPGIGVDGQKGEPG
DVGLPGPPGSPLLIGPPGAQLFKGEKGQKGLPGMTGYRGPRGPKGVSGRGEKGEKGIPGF
PGVRGNPGSYGPAGFPGIKGEPGVFGFPGQVGYPGIKGDXGEKGPPGPPGTVGTPLFPVK
GLQGDPGFPGPIGDMGSIGPPGPAGPLGRPGDDGTGLPGLPGTSGAPGLQGFQGDPGFPE
TGESIPGRPGFPGPPGLPGQPGRPGLPGLPSVICTDRGIPGEPGAKGQTGLPGRKGEKGE
KGNQGLCSCRPGPPGPRGIQGPPGTQGKKGQVGYPGRHGEKGNPGLSGAMGSPGLPGTPG
SAGQDGEKGEKGDPGRTGVKGIKGERGPSGVPGFPGQRGNDGRDGELGLPGEKGAKGDSG
VPLLGDKGFPGVPGSPGVKGQVGLPGLGFPGPPGVRGVPGDFGDTGNVGPPGPKGQKGET
VCITPPYPGSPGPPGFKGAQGQKGLKGLPGRPGPNGFDGQKGQPGRPGAGIPGPEGFRGK
AGDPGDEGERGSTVDGKNGPPGPPGIDGQKGVPGDTTYGPPGIPGYRGLPGPPGAQGTRG
DPGIPGLQGQPGTPGFPGAKGFRGSEGDIGAPGCPGFPGPPCVMGLPGPPGLRGVMGLPG
PQGLPGFKGQRGDRGLVGPPGLKGFKGSPGSPGPPGPPGSRGVPGLPGDRGAPGFPGQTG
SKGIRGPQGFPGLPGTQGPMGVSGLKGEEGEMGLPGPGGQCGDLGIKGERGPPGDSGCVT
IRLEKGQKGEPGFPGENGFRGERGEKGSAGSRGIPGFPGKNGLPGLPGDHGDTGLMGFPG
SXGFPGPKGFKGITGFQGQPGDQGDVGLPGIPGSPGLTGPKGPKGEKGDPTVLLGTRGRK
GPPGDPGLPGLCGFPGEKGSSGIQGQPGRPGSKGQPGYPGIPGFPGAMGPQGLPGEPGEK
GKHGFLGPPGLQGLAGPKGRKGLPGLPGLDGLNGLKGQKGSPGAPGQSETGTPGYSGELG
PKGDRGEPGWPGISIPGPPGERGFPGFPGRRGAVGPAGPMGRSPDSAPPGLPGDQGPPGL
DGIRGQPGNPGPPGETVFVRGDPGDAGIQGAPGIPGQRGQQGAKGLPGNQGRRGPKGPMG
IPGPHGPPGATGQPGDQGFQGKPGPKGPSGFIGDPGEPGKINDSCPAIPGPPGETGQRGD
DGSVGLPGSIGHPGPQGRKGEEGSCGLPGQDGLPGPPGLPGDQGIVGEQGYIGPQGPPGQ
TGIPGPPGPQIRSASGFLLVLHSQSDREPLCPQGMPKLWTGYSLLYLEGQEKAHNQDLGL
AGSCLPIFNTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPMMPLSEEEIQPYISRCAVC
EAPAQAVAVHSQDQSVPPCPLNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSA
PFIECQGQRGTCQFFANEYSFWLITVMPELQFASAPPSGTLKEGQEQRKKISRCQVCLKH
G
NT seq 5046 nt   +upstreamnt  +downstreamnt
atggcattaacaaaggattcatctgaatggattaaacagattatcacagctgcctggtgg
ctgctgattgttttttcagtgcaagaaattgatgggggagaatatgcatatattgaccca
tgtgggggacaggattgttcagtttgtcggtgctttccagaaaaaggatcaagaggtcag
cctggtgagctgggagctcaaggtccaattggatccttgggatctacaggaccagctggt
ctgccaggtgaaaaaggttggagaggtgagactgggcaacctgggccagctggagaaaaa
ggtgataagggcccaacaggagtcccgggatttcctggtttagatggtgttcctggatta
ccaggaagtgaaggacccacgggcaagcgtggtttggatggctgcaatggctcaagagga
gatccaggattcccaggmgaaaatggatacattggaccaagaggtccttatgggtatcca
gggcaaaaaggagaaaaaggaaattcaatatatgtttcccattttggaaaaggacctcca
ggagacagaggtgatcctggacctcccggcatgccaggacctagaggatcaagaggtaca
acaggcccacatggatacccaggccaaccaggcttgcctggtgttccaggtttcccaggt
ttgccaggtgaacagggaaatccaggcattggagtggatggacaaaaaggggagccgggt
gatgttggacttcctgggccaccagggtcaccactgttaattggacctcctggagctcag
ctgttcaaaggagaaaagggccaaaaaggacttcctgggatgacaggatacagaggacca
cgtggacccaaaggtgtatctgggagaggagaaaagggtgaaaaaggtattcctggattc
cctggagtgcggggtaatcctggttcttatggacctgcaggttttcctggaataaaggga
gaaccaggagtttttggttttcccggacaagttggctatccaggcataaagggggatycc
ggagaaaaagggcccccaggtcctcctggaactgttgggactccactgtttcctgtaaaa
ggtctgcagggagatcctggatttccaggtcccattggtgatatggggtcaattggacca
cctggccctgcaggcccactaggaagaccgggagatgatggaacaggtctgcctggcctg
ccaggaacaagtggggcaccaggactgcaaggttttcaaggtgaccctggtttccctgaa
acaggtgaatcaatcccaggaagaccgggatttcctggaccaccaggattaccaggacaa
ccgggaagaccaggcttacctggactacccagtgtaatttgtactgacagagggatccct
ggagaacctggagcaaaaggtcagacaggccttccaggaaggaaaggtgaaaaaggagaa
aagggaaatcaaggcctctgctcatgtaggcctggtcctcctggtccccgtggtatacaa
ggacctccaggtactcaaggaaagaaaggacaagtgggataccctggaagacatggagaa
aagggtaatccaggcttatctggtgcaatgggctcaccagggctccctgggacacctggt
tctgctggacaagatggtgaaaaaggagagaagggtgatccagggagaactggagtaaaa
ggaataaaaggtgaaagaggtcctagtggggttccagggtttccaggccaaagaggtaac
gatggtagagatggggaactaggattgcctggggaaaaaggagccaagggcgactctgga
gtaccgctgctgggtgataaagggttccctggggtcccaggaagtcctggggtaaaagga
caggtgggattgcctggcttggggtttcctggcccaccaggagtcagaggagtccctgga
gactttggtgatactggtaacgttgggccacctggtccaaagggtcagaaaggtgagact
gtctgtattactccaccataccctggaagtccaggccccccaggttttaaaggtgctcaa
ggacaaaagggtttaaaaggactccctggtcgtcctggaccaaatggctttgatgggcag
aaaggccagccaggcaggccgggagcaggaatccctgggccagaaggctttcgaggcaaa
gctggtgatcctggtgatgaaggtgaaagaggatctacggttgatggtaaaaatggccct
ccaggtccacctggcatagatggtcagaaaggtgttccaggtgataccacatatggtcct
ccaggaatcccaggctataggggactgccaggaccacctggtgctcaaggaacaaggggt
gatccaggcattcctgggcttcaaggacagcccggcaccccaggatttccaggtgccaaa
ggttttagaggctcagaaggtgatataggagcaccaggctgtccaggcttccctggtcca
ccatgtgtcatgggcttaccagggccaccaggactcagaggtgtcatgggcctgccaggc
cctcaaggcttaccaggatttaaaggtcagagaggagacagaggcctcgtagggccacct
ggactaaaaggtttcaaaggctctcctggctcaccaggccccccaggtcctccaggctcc
cgaggagttccaggacttcccggggataggggagcacctggcttcccaggccaaacagga
agcaaagggattcgaggacctcaaggattcccaggactcccaggaacacaagggccaatg
ggagtctctggtttaaaaggtgaagaaggagaaatgggtctgcctgggcctggtggacaa
tgtggggatttaggaataaaaggtgaaagaggacctccaggagacagtggctgcgttacc
attcggcttgagaaaggacaaaagggggaaccagggtttcctggtgagaatggatttaga
ggtgaaagaggtgaaaaaggcagtgctggttccagaggcatcccaggatttccaggaaaa
aatggtctcccgggactgccaggtgaccatggtgacaccggactgatggggtttccagga
tcacrgggttttccaggaccaaaaggctttaaaggaattacgggttttcaaggacaacca
ggtgaccagggtgatgttggcttgccaggaatccctggaagtccaggactgactggccca
aaaggacctaaaggtgagaaaggtgacccaactgttctgcttggtacacgtggtcgaaaa
gggcctccaggagatccaggattaccaggactctgtggattcccaggagagaagggttca
tcaggtatccaagggcaacctggaagaccaggatccaaggggcagcctggatacccagga
atacctggatttccaggtgctatgggccctcagggattgccaggagaacctggagaaaaa
gggaaacatggatttttgggacctccaggattgcaaggattagctggtcccaaaggcaga
aaaggtcttcctggactgcctggactagatggcttgaatggactaaaaggtcaaaagggt
tccccaggagctccaggtcaaagtgaaacagggaccccaggatactcaggagaacttgga
ccaaaaggagacagaggtgaacctggatggcctggtatttctattccaggcccccctgga
gaaaggggattcccaggatttccaggtagaagaggagctgttggacctgctggacctatg
ggaagatctcctgatagtgctcctcctggtcttccaggtgatcaaggaccacctggttta
gatggcatcagaggccagccagggaatcctggccctcctggagagactgtctttgtgcga
ggagatccaggtgatgccggtattcaaggggcacctgggattcctgggcagcgagggcaa
caaggagccaaaggtcttccagggaaccaaggaagaagaggcccaaagggtcctatggga
atacctggcccacatggtccacctggtgctacaggacaaccaggggaccaaggttttcaa
ggaaaacctggtcctaaaggtccttcaggtttcataggtgaccctggtgaaccaggaaaa
ataaatgactcatgccctgcaatcccagggcctcctggagaaacagggcaaagaggagat
gatggttctgtaggattaccagggtcaataggtcaccctggaccccaaggaagaaaaggt
gaagaagggtcatgtggcctgccaggtcaagatggcttacctgggccacctggacttcca
ggtgatcaagggattgtaggagaacaaggatacattgggccrcaaggtccacccggccag
actggtatcccaggaccaccaggccctcaaattagatctgcaagtggattcttgcttgtt
cttcacagtcagtcagacagagaaccactctgtccgcaggggatgccaaaattatggact
ggctatagtctgttgtacctggaaggacaagagaaagctcataatcaagatcttggtctg
gcaggatcttgtcttcctatatttaataccatgccctttgcttactgtaacatcaaccaa
gtttgttactacgccagtcgaaatgataagtcttactggttgtcaagtgctgctccttta
ccaatgatgccactctctgaagaagaaatacaaccatatataagcagatgtgctgtatgt
gaggccccagcccaagctgtagcagttcatagccaagatcagtcagttcctccctgcccg
ctgaactggagaagtctttggataggttattcttttttgatgcatactggatctggtgat
cagggaggtggacagtcccttatgtcacctggaagttgcctagaagacttcagatctgca
ccattcattgaatgccagggtcagcggggaacatgtcagttttttgctaatgaatacagt
ttctggctaataacagtgatgcctgaattgcagtttgcatcagcccctccgtcaggaact
ctcaaagaaggacaagagcagaggaaaaaaatcagtagatgtcaggtgtgcctgaagcat
ggctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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