KEGG   Acidovorax temperans: PQV96_04505
Entry
PQV96_04505       CDS       T08827                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
atem  Acidovorax temperans
Pathway
atem03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:atem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PQV96_04505 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atem03019]
    PQV96_04505 (pnp)
   03016 Transfer RNA biogenesis [BR:atem03016]
    PQV96_04505 (pnp)
Enzymes [BR:atem01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     PQV96_04505 (pnp)
Messenger RNA biogenesis [BR:atem03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     PQV96_04505 (pnp)
Transfer RNA biogenesis [BR:atem03016]
 Prokaryotic type
  tRNA degradation factors
   PQV96_04505 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 S1_RRP5 KH_2 DUF5813 KH-I_KHDC4-BBP KH_KhpA-B
Other DBs
NCBI-ProteinID: WCT25308
Position
963243..965447
AA seq 734 aa
MSIFNKVTKSFQWGDKTVIMETGEIARQASGAVLVNIDDTVVLATVVASKSAKPGQDFFP
LTVDYIEKTYAAGKIPGSFFKREAKPSEHETLTSRLIDRPIRPLFPEGFFNEVHVVVHTI
SLNPEVDADIAALIATSAALAISGIPFNGPIGAARVGYINGEYVLNPGQTARKNSQMDLV
VAGTEAAVLMVESEAQQLSEEIMLGAVVFGHEQGNVAINAIHELVRDAGKPVWQWEAPAK
DEALIAKVVALADDKLRAAYQIRNKQARTQACREAYVAVMAGLKADGVEFDSVKVEGMLF
DIEASIVRSQILAGEPRIDGRDTRTVRPIEIRNSVLPRAHGSALFTRGETQALVVTTLGT
ERDAQRIDALAGEYEDRFMMHYNMPPFATGEVGRMGSTKRREIGHGRLAKRALVAVLPTK
EEFPYTMRVVSEITESNGSSSMASVCGGCLSLMDAGVPMKAHVAGIAMGLIKDANRFAVL
TDILGDEDHLGDMDFKVAGTTGGITALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQ
EAMGEAKAEVSNFAPKLYTMKINPEKIRDVIGKGGAVIRALTEETGCQINIEEDGTITIA
ATEAAKADEAKRRIEQITAEVEIGKVYEGPVTKILDFGALINLLPGKDGLLHISQIAHER
VERVSDYLAEGQIVKVKVMETDEKGRIKLSMKALAERPAGGSDRPAPAERGEREPRQSRE
GGRQSADQQQQQQQ
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgagcattttcaacaaagtcacgaagtctttccagtggggcgacaagaccgtcatcatg
gaaacgggcgagatcgctcgccaagcctccggcgccgtgctggtgaacattgacgacacc
gtggtgttggccactgtcgttgcttccaagtctgccaagcctggtcaggactttttcccg
ctgacggtggactacatcgagaagacgtatgccgctggcaagatccccggcagcttcttc
aagcgcgaagccaagcccagcgaacacgaaaccctgaccagccgcctgatcgaccgtccg
atccgcccgctgttccccgaaggtttcttcaatgaagtgcatgtggtggtccacacgatc
tcgttgaaccccgaagtggacgctgacatcgccgccctgatcgccaccagcgcagccctg
gccatctctggtatcccgttcaacggccctatcggtgcggcccgcgtgggttacatcaac
ggcgaatacgtgctgaaccccggccagactgcgcgcaagaactcgcagatggacttggtg
gtggcgggcaccgaagccgctgtgctgatggtggagtccgaagcccagcaactgtccgaa
gaaatcatgctgggcgccgtggtgttcggtcacgagcaaggcaatgtggccatcaacgcc
atccacgaactggtgcgcgacgcgggcaagcctgtgtggcagtgggaagcgcctgccaag
gacgaagccctgatcgccaaggtggtcgcattggccgacgacaagctgcgcgctgcctac
cagatccgcaacaagcaagcccgtacccaagcctgccgtgaagcctatgtcgctgtgatg
gctggcctgaaggctgacggcgtggagttcgactccgtcaaggtcgaaggcatgctgttc
gacatcgaagccagcatcgtgcgtagccagatcctggcgggcgaaccccgcatcgacggc
cgcgatacgcgcactgtgcgccccatcgaaatccgcaacagcgtgctgccccgcgcccac
ggctcggccctgttcacgcgtggcgaaacccaggcgctggtcgtgaccacactgggcacc
gagcgtgatgcacagcgcatcgacgcgctggctggcgagtacgaagaccgcttcatgatg
cactacaacatgcctcccttcgccaccggcgaagtgggccgcatgggctcaaccaagcgc
cgcgaaatcggccatggccgtctggccaagcgtgctctcgtggccgtgttgccaaccaag
gaagaattcccctacaccatgcgtgtggtgtcggaaatcactgagtccaacggctcctcg
tcgatggcttcggtgtgcggcggctgcctgtcgctgatggatgccggcgtgcccatgaag
gcgcacgtggccggtatcgccatgggcctgatcaaggacgccaaccgtttcgccgtgctg
accgacatcctgggtgatgaagatcacctgggcgacatggactttaaggtggcgggtacc
acgggtggtatcacggccttgcagatggacatcaagatccagggcatcaccaaggaaatc
atgcaggtggcactggcccaggccaaggaagcgcgcatgcacatcctgggcaagatgcaa
gaagccatgggtgaggccaaggccgaagtgtcgaacttcgcgcccaagctgtacaccatg
aagatcaaccccgagaagatccgtgacgtgatcggcaagggcggcgccgtgattcgtgcg
ctgaccgaagaaaccggctgccagatcaacatcgaggaagacggcaccatcaccatcgct
gcgaccgaggccgccaaggctgacgaagccaagcgccgcatcgagcagatcacggccgag
gtggaaattggcaaggtgtacgaaggccctgtcaccaagattctggatttcggcgcgctg
atcaacctgctgcccggcaaggacggtctgctgcacatcagccagatcgcccacgagcgc
gtcgagagggtgtcggactacttggcagaaggccagatcgtcaaggtcaaggtcatggaa
accgacgaaaagggtcgtatcaaactgtcgatgaaggcgctggcagagcgtcctgctggt
ggtagcgatcgccctgcgcctgcagagcgcggcgagcgtgagccacgccaaagccgagaa
ggtggtcgccagtcggctgaccagcaacagcagcaacagcaataa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (10)   
   Pfam (10)   
All databases (11)   

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