KEGG   Bradyrhizobium guangdongense: X265_30175
Entry
X265_30175        CDS       T05902                                 
Name
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bgq  Bradyrhizobium guangdongense
Pathway
bgq03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bgq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    X265_30175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bgq03400]
    X265_30175
Enzymes [BR:bgq01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     X265_30175
DNA repair and recombination proteins [BR:bgq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     X265_30175
SSDB
Motif
Pfam: DNA_ligase_A_M RNA_ligase
Other DBs
NCBI-ProteinID: QAU41482
Position
6315608..6316195
AA seq 195 aa
MQKRFEYCVPKVAQVVPTGRDWLHEIKYDGYRGRIERDGDRVRLLSKSGLDWAWRYPLIV
ETALKLRSKHFTIDGEIVVLDESGVSDFDALHANRNNAAARFYAFDCMALAGDDLRELPL
FERKDRLARLMRNEAAGIFVATYESGEIGPDLFKAACKMGLEGIVSKHRERWYRPRTCDW
RKVKNRTHPAFSREF
NT seq 588 nt   +upstreamnt  +downstreamnt
atgcaaaagcgttttgagtattgcgtgccgaaggtcgcccaggtcgtcccgaccggtcgc
gattggctccacgaaatcaagtacgatgggtatcgaggtcgcatcgagcgcgacggcgac
cgggtccggctgttatccaagtcgggtctcgattgggcgtggcgctacccgctgatcgtc
gagaccgccctgaagctccgctccaaacacttcaccatcgacggcgagatcgtcgtgctc
gatgagagcggcgtttcggatttcgacgcccttcacgccaaccggaacaacgcggcggcg
cggttctacgcctttgattgcatggcgctcgccggtgacgacttgcgggaactgccactg
ttcgagcgcaaggataggctcgcccggctgatgcggaacgaggccgctggcatcttcgtc
gccacgtatgagagcggcgagatcggccccgacctgttcaaggcggcctgcaagatgggt
ctcgaaggcatcgtatcgaagcaccgcgagcggtggtatcggccgcgaacctgcgattgg
cgcaaggtcaagaaccgcacgcaccctgctttctcgcgggagttttag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (3)   

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