KEGG   Bordetella parapertussis 12822: BPP0642
Entry
BPP0642           CDS       T00140                                 
Name
(GenBank) probable regulator
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
bpa  Bordetella parapertussis 12822
Pathway
bpa02020  Two-component system
bpa02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bpa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BPP0642
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BPP0642
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bpa03000]
    BPP0642
Transcription factors [BR:bpa03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    BPP0642
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 HVO_A0261_N Crp HTH_29 HTH_24 MarR_2 GntR HTH_IclR MarR HTH_23 HTH_11 Rrf2 HTH_5 DIP2311-like_C RepL TrmB Phage_rep_O Fe_dep_repress HTH_AsnC-type HTH_3 HHH_XRCC3_RpoA DUF977 DUF1670
Other DBs
NCBI-ProteinID: CAE36227
UniProt: Q7WBP4
Position
680995..681699
AA seq 234 aa
MARRPARLHAGRAVAIDVNYSSWDTSRKFGAGWLLRTDLGRVRAFAEGQALYRQGDVHDS
FFLVRSGFLHTVVHGANGGVLLLEIFGPDAIFGEASAFVDEPRYVTARAVTPAVVTEYRV
SELLPVLAGEPGLAVSLIQLLGIKHRILIGKLLRATSASPRERLEGLLGRIAAGSEQTRA
LRLTHEQLARMTGLSRVTVTRALKAMAEEGLVDTRGKGVEIRDAERLRARLGPF
NT seq 705 nt   +upstreamnt  +downstreamnt
atggcgcgccgcccggcgcgcttgcacgcaggaagggccgtggccatcgatgtcaattat
tcgtcctgggatacgtcgcgcaaattcggcgcgggctggctgctgcgcaccgatctgggg
cgggtgcgcgcgttcgccgagggccaggcgctctacaggcagggcgatgtgcacgacagc
ttcttcctggtgcgatcgggattcctgcatacggtcgtgcacggcgccaatggcggcgtc
ctgctgctggagatcttcgggccggacgcgattttcggcgaggcctcggccttcgtcgac
gagccgcgctatgtcacggccagggcggtcacgcccgcggtcgtgaccgagtaccgcgtc
tccgaactgctgccggtgctggccggcgagcccgggctggcggtgtcgctgatccagttg
ctgggcatcaagcaccgtattctcatcggcaaattgctgcgggcaacctcggccagtccg
cgcgagcggctggagggcctgctgggccgcatcgcggcgggctcggagcagacccgcgcg
ttgcgcctgacgcacgagcagctggcccgcatgaccggcctgagccgggtgacggtgacc
cgcgcgctgaaagccatggccgaggagggactggtcgacacgcgcggcaagggcgtggag
atccgcgacgccgagcgcctgcgcgcgcggctggggccgttctga

  All links  
Gene (5)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (30)   

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