KEGG   Cygnus atratus (black swan): 118255291
Entry
118255291         CDS       T09349                                 
Symbol
CACNA1S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S
  KO
K04857  voltage-dependent calcium channel L type alpha-1S
Organism
cata  Cygnus atratus (black swan)
Pathway
cata04010  MAPK signaling pathway
cata04020  Calcium signaling pathway
cata04260  Cardiac muscle contraction
cata04261  Adrenergic signaling in cardiomyocytes
cata04270  Vascular smooth muscle contraction
cata04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:cata00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    118255291 (CACNA1S)
   04020 Calcium signaling pathway
    118255291 (CACNA1S)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    118255291 (CACNA1S)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    118255291 (CACNA1S)
   04261 Adrenergic signaling in cardiomyocytes
    118255291 (CACNA1S)
   04270 Vascular smooth muscle contraction
    118255291 (CACNA1S)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cata04040]
    118255291 (CACNA1S)
Ion channels [BR:cata04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   118255291 (CACNA1S)
SSDB
Motif
Pfam: Ion_trans GPHH Ca_chan_IQ PKD_channel CAC1F_C PRIMA1
Other DBs
NCBI-GeneID: 118255291
NCBI-ProteinID: XP_035417257
Position
24
AA seq 1845 aa
MEPTSPQDDVKRRQQKEKSKKPVPPAAPRPPRALFCLTLQNPLRKACISIVEWKPFEIII
LLTIFANCVALAIYLPMPEDDTNVANSSLEKIEYAFLIFFAIEAMLKIIAYGFLFHTDAY
LRNGWNVLDFSIVSLGLFTMTLEQINAKQGGSSGGKGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGQELFKGKMHKTCYYFGTDVIATVGVE
KPAPCTTSGHGRHCTINGTECRSGWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYW
VNDAIGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDLKGYMDWITHAEVMDSDRARGEGMMPLDEGGSETESLYEIEGMNKWILYFRQWRRWNR
MFRRKCRDVVKSKFFYWLVILLVALNTLSIASEHHFQPEWLTVVQDNANRVLLALFVAEM
LLKMYALGLRQYFMSLFNRFDCFVVCAGILETILVELSTLSPLGISVLRCIRLLRIFKIT
RYWTSLSNLVASLLNSVRSIASLLLLLFLFIIVFALLGMQLFGGKYDFEDMEVRRSTFDN
FPQALISVFQILTGEDWNSIMYNGIMAYGGPSFPGMLVCIYFIILFVCGNYILLNVFLAI
AVDNLAEAESLTSAQKAKAEERKRRKMSRGYPEKSEDEKQMLAKKLEQKAKGEGIPTTAK
LKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASSF
FIFSPTNKFRMLCHRIVNATWFTNFILLFILLSSISLAAEDPIRAESFRNQILGYFDIGF
TSVFTVEIVLKMTAYGAFLHKGSFCRNSFNILDLLVVAVSLISMGIESSTISVVKILRVL
RVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVVVTTLLQFMFACIGVQLFKGKFYSCSD
PSKLTEKECRGDFIDYVDGDPTQIELKKRVWFHNDFHFNNVFSAMMSLFTVSTFEGWPEL
LYRAIDTNDENKGPIYNYRVEIAMFFIIYIILIAFFMMNIFVGFVIVTFQEQGESEYKNC
ELDKNQRQCVQYALKARPLRRYIPKNPYQYQIWYVVTSSYFEYLMFFLILLNTICLGMQH
YNQSAEMNHISDILNVAFTILFTLEMILKLMAFKAKGYFGDPWNVFDFLIVIGSIIDVIL
SEIDTVLASSGGLYCLGGGCENIDPDDNSRVSITFFRLFRVMRLVKLLSRGEGVRTLLWT
FIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIAMVDGTQINRNNNFQTFPQAVLLLFRC
ATGEAWQEILLDCSYGKLCDPESDFAEGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAV
IMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFC
PHRVACKRLVCMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRAIIKKIWK
RTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFMKRQEEYYGYRPKKNPVEIQAGL
RSIEEEAAPEIHRAISGDLMAEEELERAMVEAAMEEGIYRRTGGLFGQVDSFLEPSSPLQ
PQVASQRPLQFTEVGSEDLDSPVFLDEFPQEGNTNTNNSNWPEGLQYEDEVLRKTAPAAP
RPPAQGRDLPFPSERLQRRPSGRRGATSGHRPASGQHLLPQELSRGGGAATGAAPSSEHQ
RGESSDPSTSSTPAITFLIQEALISGGLEALARDPSFVAVTRDEMAASSQLEMDEVEKAA
VELLKGREAPQDAGSVPWDTSAASPAGSPGLSTAASQKSSPAAHP
NT seq 5538 nt   +upstreamnt  +downstreamnt
atggagcccacttctccccaggatgacgtgaagaggaggcaacagaaggagaagtccaag
aagccggtgccaccagcagcccctcggccgccccgggctctgttctgcttaaccctgcag
aacccgctgcggaaggcatgcatcagcatcgtggagtggaagcctttcgagatcatcatc
cttctgaccatctttgccaactgtgtcgccctggccatctacctgcccatgcccgaggat
gacaccaacgtcgccaactccagcctggagaagatcgaatatgccttcctgatcttcttt
gccatcgaggcgatgctcaagataattgcctacgggtttcttttccatacggatgcctac
ctccgaaatggctggaacgtgctcgacttctccatcgtgtcccttgggcttttcaccatg
accctggagcagatcaatgcgaagcagggagggtcttcgggggggaaaggcggcttcgac
gtgaaggccctgcgagcgtttcgtgtgctgagaccgctgcgcctggtgtcgggagtgccg
agccttcaggtcgtcctgaactccatcatcaaggccatggtgcccctgctccacatcgcc
ctgcttgtgctcttcatgatcatcatctatgccatcgtcgggcaggagctcttcaagggc
aagatgcacaagacctgctactacttcgggacagatgtgatcgccacggtgggggtggag
aagccagccccctgcaccacctctggccacgggcgacactgcaccatcaatggcaccgag
tgccgaagcggctggccgggacccaacaacggcatcactcactttgacaacttcggcttt
gccatgctgacagtctaccagtgcatcaccatggaaggctggactgaggtcctctactgg
gttaacgatgccattgggaacgaatggccctggatctattttgtcagccttatcttgctc
ggctccttcttcgttctcaacctggtgctgggggtgctcagcggtgaattcaccaaggag
cgtgagaaggccaagtcgcggggcacgtttcagaagctgcgggagaagcagcagctggag
gaggacctgaagggctacatggactggatcacccacgctgaggtgatggacagtgaccgg
gctagaggagaaggtatgatgcctttggatgaaggagggtcggagacggagagcttgtat
gaaattgagggcatgaacaagtggattctctacttccggcagtggaggcgctggaaccga
atgtttcgtaggaagtgcagggatgtggtgaagtccaagttcttctactggctcgtcatc
ctgctggtggcactgaacaccctctccattgcctctgagcaccatttccagcccgagtgg
ctgacggtggtgcaagacaacgccaacagggtgctgctagcactctttgtggccgagatg
ctgctgaagatgtacgcgctgggcctgcgccagtacttcatgtccctcttcaaccgcttc
gactgctttgtggtgtgtgcgggcatcttggagaccatcctggtggagctcagcaccctg
tcacccctgggcatctccgtgctgcgctgtatccggctcctccgcatcttcaagatcacc
aggtactggacatccctgagcaacctggtggcctctctgctcaactcggtccgctccatc
gcctctctgcttctcctcctcttcctcttcatcatcgtcttcgccctgctgggcatgcag
ctctttgggggcaagtacgacttcgaggacatggaggtgcggcgcagcacgtttgacaac
ttcccccaggccctcatcagtgtcttccagatcctgaccggagaggactggaattcaata
atgtacaacgggataatggcctatggaggcccgtccttccctggcatgctggtttgcatc
tacttcatcatcctctttgtttgtgggaactatatcctcctcaatgtcttcctggccatt
gcggttgacaacctggccgaggctgagagcctcacctcagcccagaaggccaaagcagag
gaacgcaagcggcgcaagatgtccaggggttacccagagaagtcagaagatgagaagcag
atgctggcgaagaagcttgagcagaaagcgaagggagaagggattcccacaacagccaag
ttaaaagtggatgaatttgagtccaatgtcaatgagatcaaagacccttacccatctgca
gacttcccaggtgacgatgaggaagatgagcctgaaatccccctgagtcctcggccacgt
cccctggcagagctacagctgaaagagaaggctgtgcctatgcctgaagccagctccttc
ttcatcttcagcccaaccaacaagtttcggatgctgtgccacagaatcgtcaatgccacc
tggttcaccaacttcatcctgctcttcattctgctcagcagcatctccctggcggccgag
gatcccatccgcgccgagtcgttccgcaaccagattcttggatactttgacatcggtttc
acctctgtcttcaccgttgaaatagtcctgaagatgacagcctacggcgctttcctgcac
aaaggctccttctgcaggaactcattcaacatcctcgacttgctggtggttgctgtctcc
ctcatctccatgggaatcgagtccagcaccatctcggtggtgaagatcctccgggtgctg
agggtgctgagacctctgcgagccattaacagggccaaggggctgaagcacgtggtccag
tgtgtgttcgtggccatcaagaccatcggcaacatcgtggtcgtcacgacgttgctgcag
ttcatgtttgcctgcatcggggtccagcttttcaaggggaagttttacagctgctcagac
ccatccaagctgacggagaaagagtgcaggggtgatttcatcgactacgtggatggggac
ccgacgcagatcgagctgaagaagcgtgtctggttccacaacgacttccacttcaacaac
gtcttctcagccatgatgtcgcttttcaccgtctccaccttcgagggctggccagagctg
ctatacagggccattgacactaatgatgagaataaaggccctatctacaactaccgggtg
gagattgcaatgttcttcatcatctacatcatcctcattgccttcttcatgatgaacatc
tttgtgggctttgtcattgtcaccttccaggagcagggggagagcgagtacaagaactgt
gagctggacaagaaccagcgccagtgtgtgcagtacgcgttgaaggctcgcccgctgcgg
cgctacatccccaagaacccctaccagtaccagatctggtacgtggtcacctcctcctac
ttcgagtacctcatgttcttcctgatcctgctcaacaccatctgcctgggcatgcagcat
tacaaccagtctgcggaaatgaaccacatctcagacatcctcaacgtggccttcaccatc
ctctttaccctggagatgattctcaagctcatggccttcaaagccaagggctactttggg
gacccctggaacgtctttgacttcctcatcgtgatcggcagcatcatcgatgtcatcctc
agcgagatcgatactgttcttgcatccagcggcggattgtactgcctcggcgggggctgt
gagaacatcgaccccgatgacaactcccgcgtctccatcactttcttccgcctgttccgc
gtgatgcggctggtgaagctgctgagccggggagaaggcgtccggaccctcctgtggacc
ttcatcaagtccttccaggctctgccctacgttgccctcctgattgtgatgcttttcttc
atctatgctgtgatcgggatgcagatgtttgggaagattgccatggtggacgggacccag
atcaaccgaaacaacaacttccaaaccttcccacaagctgtgctgctgctcttcaggtgt
gcgacaggggaggcctggcaggagatcctgctggactgcagctacgggaagctgtgcgac
cccgagtccgactttgccgagggcgaggagtacacctgtggcacgggcttcgcctacttc
tatttcatcagcttctacatgctctgcgccttcctgatcattaacctctttgtggccgtc
atcatggacaactttgactacctcacacgcgactggtccatcctcggaccccaccacctg
gatgagttcaagcggatctgggctgagtacgaccccgaggccaagggcaggatcaaacac
ttggacgtggtgactctgctgagacgtatccagcctcccctgggcttcgggaagttctgc
ccgcaccgtgtagcttgtaagcgtctggtgtgcatgaacatgcccctgaacagcgacggc
accgtcaccttcaatgcaaccctctttgcgctggtgaggacagccctcaagatcaagaca
gaaggtaacttcgagcaggccaacgaggagctcagagctattatcaaaaaaatctggaag
cgaaccagcatgaaactcctggaccaggtcatcccacctatcggagatgatgaggtgaca
gtgggcaaattctatgccacgttcctcatccaggagcatttcaggaagttcatgaagcgc
caggaggagtattacgggtaccgtcccaagaagaaccccgtagagatccaggccgggctg
aggagcattgaagaagaagcagctccggaaatccatcgagccatctctggggacctgatg
gctgaggaggagctggaaagagcgatggtggaggctgccatggaggaagggatatacagg
aggacaggcggcttgtttggccaggtcgacagcttcctggagccgagcagccccctgcag
ccccaggtggccagccagagacccctgcagttcacagaggtgggcagcgaagacctcgat
tcccctgtcttcctcgacgaattcccccaggaaggcaacaccaacaccaacaacagcaac
tggccggaggggctgcagtacgaggacgaggtgctgaggaagacggcgccagcagcaccc
aggcctccagcacagggccgtgacctccccttcccttcggagaggctgcagcggaggccg
agcgggaggcgaggagccacctctgggcatcgcccagcatcagggcagcaccttctgccc
caggagctgtccagagggggtggcgctgcgacgggagcagcccccagctcagaacaccag
cggggtgaaagcagcgacccaagcacttcttccaccccggccatcaccttcctcatccag
gaggctctgatctccgggggccttgaggctctggcccgggacccatccttcgtggcagtg
accagggacgagatggcagccagcagccagctagagatggatgaagtggagaaggcagct
gtggagctgctgaagggaagagaagcaccgcaggacgccggttctgtcccctgggacact
tcggctgcgtcaccagccggctccccggggctcagcacagctgcctcccaaaaatccagc
cctgctgctcacccgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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