KEGG   Calonectris borealis (Cory's shearwater): 142088545
Entry
142088545         CDS       T11211                                 
Symbol
CACNA1C
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C
  KO
K04850  voltage-dependent calcium channel L type alpha-1C
Organism
cbor  Calonectris borealis (Cory's shearwater)
Pathway
cbor04010  MAPK signaling pathway
cbor04020  Calcium signaling pathway
cbor04260  Cardiac muscle contraction
cbor04261  Adrenergic signaling in cardiomyocytes
cbor04270  Vascular smooth muscle contraction
cbor04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    142088545 (CACNA1C)
   04020 Calcium signaling pathway
    142088545 (CACNA1C)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    142088545 (CACNA1C)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    142088545 (CACNA1C)
   04261 Adrenergic signaling in cardiomyocytes
    142088545 (CACNA1C)
   04270 Vascular smooth muscle contraction
    142088545 (CACNA1C)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cbor04040]
    142088545 (CACNA1C)
Ion channels [BR:cbor04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   142088545 (CACNA1C)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH CAC1F_C PKD_channel DUF4834
Other DBs
NCBI-GeneID: 142088545
NCBI-ProteinID: XP_075024260
Position
1
AA seq 1996 aa
MLMEACGSTKERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFS
AILEQATKADGGNSIGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLL
HIALLVLFVIIIYAIIGLELFMGKMHKTCYHVQGGLIDTPAEDDPSPCAPQSAHGRQCQN
GTECKAGWEGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWVNDAIGRDWPWIYFVTL
IIIGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDID
PENEDEGMDEEKPRNMSMPTSETESVNTDNVPGADIEGENCGARLAHRISKSKFSRYWRR
WNRFCRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHYNQPDWLTEVQDTANKVLLALFT
AEMLLKMYSLGLQAYFVSLFNRFDCFIVCGGILETILVETKIMSPLGISVLRCVRLLRIF
KITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRRST
FDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVF
LAIAVDNLADAESLTSAQKEEEEEKERKKLARTASPEKKQETEKTAVEEETKEEKIELKS
ITADGESPPATKINVDDYQPNENEEKTPYPTTEAPAEEDEEEPEMPVGPRPRPMSELHLK
EKAVPMPDASAFFIFSPNNRFRVHCHRIVNDNIFTNLILFFILLSSISLAAEDPVRHLSF
RNQILGNADYVFTSIFTLEIILKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQS
SAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGV
QLFKGKLYSCTDSSKQTAAECRGYYITYKDGEVNQPMIQPRSWENSKFDFDNVLTAMMAL
FTVSTFEGWPELLYRSIDSHMEDVGPIYNHRVEISIFFIIYIIIIAFFMMNIFVGFVIVT
FQEQGEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNQYQYKVWYVVNSTYFEYLMFVL
ILLNTICLAMQHYGQSCMFKEAMNILNMLFTGLFTVEMVLKLIAFKPKHYFCDAWNTFDA
LIVVGSIVDIAITEVNPAEHTQCSSSMNAEENSRISITFFRLFRVMRLVKLLSRGEGIRT
LLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALNDTTEINRNNNFQTFPQAVLL
LFRCATGEAWQEIMLACLPDKKCDPESEPANSTEADHSCGSSFAVFYFISFYMLCAFLII
NLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPL
GFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTEGNLEQANEELRAI
IKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVGKPSQRNA
LSLQAGLRTLHDIGPEIRRAISGDLTAEEELDKAMKEAVSAASEDDIFRRAGGLFGNHVS
YYQSDGRSAFPQTFTTQRPLHINKSGNNQGDTESPSHEKLVDSTFTPSSYSSSGSNANIN
NANNTALCRFPSPPSYPSTVSTVEGHGTPLSPTIRVQEAPWKLPSKRTHYYETLGRSSSR
DSQLAIVCQEEVSQDETYDENLNEDIEYCSEPSLLSTEMLAYQDDENRQLTPPENNKGED
TRHSPKKGFLCSSALGRRASFHLECLKRQKNQGVDVSQKTVLPLHLVHHQALAVAGLSPL
LQRSHSPTMFSRLCATPPATPCSRGWPQQSIPTLRLDGAESSEKLNSSFPSVHCGSRFTD
NTGCSSPRRARPVSLTVPSQTGGSSRQFHGSAGSLVEAVLISEGLMQFAQDPKFIEVTTQ
ELADACDMTIEEMENAADNILNGNSKQSPNGNLLPFVNCRDPGQDSAGEEEEEVQNPDCR
KSQEELKDSRIYISSL
NT seq 5991 nt   +upstreamnt  +downstreamnt
atgctgatggaggcatgtggcagcacaaaggaacgagtggaatatctctttctcataatt
tttacagtggaagcatttttaaaagtaatagcatatggacttctctttcacccaaacgct
tacctccgcaatggctggaatttactagattttataattgtggtagtagggctttttagt
gcaattttagaacaagcaaccaaagcagatggggggaattcaataggaggaaaaggtgcc
ggattcgatgttaaagcactgcgggctttccgagtattacgtccgttacggctggtgtct
ggagttcctagtctccaggtggttttaaattcaattatcaaggccatggtccctttgttg
catattgccctgctggtgctgtttgtcattattatctatgccatcattggactggagtta
ttcatggggaagatgcataagacctgctaccatgtgcaagggggacttatcgatacacct
gcagaagatgatccgtctccctgtgccccccagtctgcgcatgggcggcagtgtcagaac
ggcacggagtgcaaggcaggctgggagggtcctaagcacggcattacgaactttgacaat
tttgcttttgccatgttgacggtgtttcagtgcatcacgatggagggctggacagatgta
ctgtactgggtcaatgatgccataggaagggactggccctggatctattttgttacacta
atcatcatagggtcattttttgtacttaacttggttctcggtgtacttagcggggagttt
tccaaagaaagagagaaggctaaggctcggggcgatttccagaagttacgggaaaaacaa
cagctagaggaggatttgaagggatacctagactggataactcaagcagaagatattgac
ccagaaaatgaagatgaaggcatggatgaggagaagcctcgaaacatgagcatgcccacc
agtgagaccgagtccgtgaacacagacaacgtccctggagcagatattgaaggcgaaaac
tgcggtgctaggctagcgcatcggatctcaaaatcaaagtttagtcgctactggcgccga
tggaatcgattctgcagaagaaagtgccgcgctgctgtcaagtctaatgttttctactgg
ttggtgatcttccttgtgtttctcaacaccctcaccattgcctctgaacactacaaccag
ccagactggctgacggaggtccaagacactgccaataaggtgctgctagctcttttcacg
gcagagatgctgctgaagatgtacagccttggtctccaggcctattttgtgtccctcttc
aaccgctttgactgtttcattgtgtgtggaggaatcctggaaacaattttggttgagaca
aagatcatgtcaccactgggcatttcggtgttgagatgtgttcgactcctaagaatattt
aaaatcacaagatactggaactccctgagtaaccttgtggcttcactcctgaattcagtc
cgctccattgcctccctgttgctgcttctcttcctcttcattatcatattctcactcctg
gggatgcagctctttgggggcaagtttaactttgatgagatgcagaccaggaggagtaca
ttcgacaacttcccccagtccctcctcactgtgtttcagatcctgactggggaggactgg
aattcggtgatgtatgatgggatcatggcttatggcggcccctcttttccaggaatgttg
gtctgtatttacttcatcatcctcttcatctgtggaaactatatcctgctgaatgtattt
ttggccattgctgtggacaaccttgctgatgcggagagtttaacatctgcacagaaagag
gaggaagaggaaaaagaaaggaaaaagctagctaggactgctagtcccgaaaagaaacag
gagacagaaaaaacagctgtggaggaggagacaaaggaggagaaaattgagctgaaatcg
atcactgctgatggagaatccccgcctgctaccaagatcaatgtggatgattatcagccc
aatgaaaacgaagaaaagaccccatatcccacaacagaagcgccagcagaggaagatgag
gaagaacccgagatgcctgtcggccctcggcctcgcccgatgtctgagctgcacctcaag
gaaaaggctgtgcccatgcctgatgccagtgcttttttcatcttcagtcctaataacagg
tttcgtgtccactgccatcgaatcgttaacgataacattttcaccaacctgatcctattt
ttcatcttgctcagcagcatctccctggcagctgaggaccccgtccgacacctctccttt
aggaaccaaatcctaggcaatgcagactatgtcttcactagtatctttacattagaaatt
attcttaagatgaccgcatacggggctttcctccataagggctccttctgcagaaactat
ttcaacatcttagacctgctggtggtcagcgtttctctcatctcttttgggatccagtcc
agtgccatcaatgtggtgaagatcctccgtgttctgcgagtgcttagaccgctgagggcc
atcaatagagccaaaggactaaagcatgtggtccagtgtgtgtttgtcgccatccgaacc
atcggaaacattgtgattgtcaccactttgctgcagttcatgtttgcctgcattggagtt
cagttgtttaagggcaagctgtacagctgcactgatagctccaagcagacagcagcagaa
tgcagagggtactacattacgtacaaggatggtgaggtcaaccagccgatgatacagccc
cggagctgggagaacagcaagtttgacttcgacaacgtcttgactgccatgatggccctc
ttcactgtctcaacctttgagggctggccagagttgctgtataggtccattgattcccac
atggaggatgtgggacccatctataatcacagggttgagatctccatcttctttattatc
tacatcatcatcattgctttcttcatgatgaacatcttcgttggtttcgtcatcgtcaca
tttcaggaacaaggagaacaagagtacaagaactgtgagctggacaaaaaccagcgccag
tgtgtagaatatgccctgaaggcccggcccctgcggagatacatccctaaaaaccagtac
cagtacaaagtttggtatgtggtcaactccacctattttgaatacctgatgttcgttctg
atcctgctgaacaccatctgcctggccatgcaacactacggtcagagctgcatgttcaag
gaagccatgaatatcctcaacatgctcttcactggcctcttcactgttgagatggtcctg
aaattaatcgccttcaaacccaagcactatttctgtgatgcatggaatacatttgacgcc
ttgattgttgtgggtagcattgttgatatagcaatcaccgaggtgaacccagctgaacat
acccaatgctcttcctctatgaacgcagaggaaaactctcgcatctcaatcaccttcttc
cgactcttccgcgtgatgcgtcttgtgaagctcctgagccgaggggagggcatccggacg
ctcctttggaccttcatcaagtccttccaggctctcccctatgtggctcttttaatagtg
atgttgttcttcatctacgccgtgatcgggatgcaggtgtttggtaaaattgcgctgaac
gataccacagaaatcaaccgcaacaacaacttccagaccttcccccaggcagtgctgctg
cttttcaggtgtgccaccggtgaggcctggcaggaaatcatgctggcatgtctcccagac
aagaagtgcgacccagagtcggagccggccaactccaccgaagccgatcactcctgtggc
agcagcttcgccgtcttctatttcatcagcttctacatgctctgtgccttcctgatcatc
aatctttttgtagctgttataatggataactttgattacctgacacgggactggtccatt
ttaggaccacaccacctggatgagtttaaaaggatctgggcagagtatgaccctgaagcc
aagggacggatcaaacacttggacgtggtgacactgctccggcggattcagccccccctg
ggcttcgggaagctctgccctcaccgggtggcttgcaaacgccttgtctccatgaatatg
ccactgaacagtgatgggactgtcatgttcaatgccactctctttgcgttggtcagaaca
gcactgaggatcaagacagaaggtaacctggagcaagccaacgaagagctgagagcaata
attaagaaaatctggaagcgtaccagtatgaagctgctggaccaggtggtgccccccgca
ggcgatgacgaggtgactgtcgggaagttctacgccactttcctgattcaggagtatttc
aggaagttcaagaaacgtaaagaacagggactggtgggcaagccctcccaacgcaacgca
ctctccttgcaggctggtctgcgcacacttcacgacattgggccagagatccgacgagca
atttctggagacctgacagctgaagaagagctagataaggccatgaaagaagctgtttct
gctgcctctgaagatgatatcttccggagagccggaggcttgttcggaaaccatgtcagc
tattaccaaagtgatggcaggagcgcgttcccccagacattcaccacccagcgacctttg
cacatcaataagtctggcaacaaccagggagataccgagtctccatctcatgagaagttg
gtggactccaccttcactcccagcagctactcatcttcaggctccaatgccaacatcaac
aatgccaacaacactgccctgtgccgcttccccagcccacccagctaccccagcactgtc
agcacagtggaaggccacgggacccccttgtcacccaccatacgtgtgcaggaggctcct
tggaaactaccttccaaaaggacgcattactacgaaacactgggacgctccagttccaga
gacagccagctggcaattgtttgccaagaggaagtgtctcaggatgagacttacgatgaa
aatttgaatgaagacattgagtactgtagtgaaccaagtctgctctctactgaaatgctt
gcataccaagatgatgaaaacagacaacttactccaccagaaaacaacaaaggagaggac
acccggcactctccgaagaaagggtttctgtgctcctcagcactaggtcgaagagcgtcg
tttcacttagagtgtctgaaaagacagaaaaaccagggcgtagacgtctcgcagaagaca
gttctgcctttgcatctggtacatcatcaggcgttagcggtggccggcctgagtcccctg
ctccagcgaagccattcccccaccatgttctctcggctgtgtgctacgccccccgctaca
ccctgcagccgtggctggccgcaacagagcatcccgactctgcgcctcgacggggcagag
tccagtgagaagctcaacagcagcttcccgtcagtacactgcggctctcggttcactgac
aacaccggctgcagcagcccgaggagagccaggccggtctccctcaccgtccccagccag
accggagggagcagcaggcagtttcacggcagcgctggcagcctggtcgaagcggtcttg
atttcggaaggactgatgcagtttgctcaagatccaaagttcattgaggtcacaacccag
gagctcgcagacgcctgtgacatgacgatagaagagatggaaaatgcagcagacaacatt
ctcaatggtaacagcaagcagagccccaatggcaacctcttgccttttgttaactgcagg
gacccagggcaggacagtgcaggagaggaagaggaagaggtgcagaacccggattgtaga
aaaagtcaggaggagctcaaggacagcaggatttatatcagcagcctgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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