KEGG   Cynara cardunculus var. scolymus (artichoke): 112517911
Entry
112517911         CDS       T05604                                 
Name
(RefSeq) 26S proteasome regulatory subunit 6B homolog
  KO
K03063  26S proteasome regulatory subunit T3
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03050  Proteasome
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    112517911
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ccav03051]
    112517911
Proteasome [BR:ccav03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     112517911
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_16 AAA_5 AAA_lid_3 AAA_2 AAA_22 DUF815 RuvB_N nSTAND3 AAA_28 NPHP3_N TIP49 Sigma54_activat RNA_helicase AAA_14 Mg_chelatase AAA_24 TsaE IstB_IS21 AAA_7 Parvo_NS1 AAA_18 AAA_30 NTPase_1 NACHT ATPase_2 AAA_3 AAA_25 NB-ARC AAA_33 DUF5906 AAA_11 ABC_tran ATPase GPS2_interact DUF3450 Viral_Hsp90 AAA_19 DUF6570 AAA_17
Other DBs
NCBI-GeneID: 112517911
NCBI-ProteinID: XP_024981092
Position
LG 9:17234420..17241444
AA seq 416 aa
MASTMVLEPKPSSSATPPPTLPNPYTMDSPLIDTEDDLYTRLKSLDRQIEFIEIQEEYVK
DEQKNLKRELLRSQEEVKRIQSVPLVIGQFMEMIDQNNGIVGSTTGSNYYVRILSTINRE
LLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVE
LPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGE
GPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQT
VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLED
YVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFDFYK
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggcttcgactatggttctggagcctaaaccctcctcatcagcaacgccaccaccaacc
cttcccaatccctacaccatggactctcccctaatcgacaccgaagatgacctctacact
cgtctcaaatccctagaccgccaaatcgagttcattgaaatccaggaagagtacgttaaa
gatgagcaaaaaaatctcaagcgagaactccttagatctcaagaggaggttaagcggatc
caatcggtgccgctcgtaattggtcagtttatggagatgatcgaccagaataatggcatt
gtggggtcaactacagggtctaattactatgttaggattttgagcacgattaatcgggag
ttattgaagccctcggcatctgtggcgttgcaccgccattctaatgctctcgttgatgtg
ttgccaccggaggctgactcgagtatttctcttcttagccagtctgagaaaccagatgtt
acttacaacgatatcggaggatgtgacattcaaaagcaggaaatacgcgaagctgttgag
ttgcctttgacccatcatgaattgtacaaacagataggtatagatcctccccgtggtgtt
ttgctctatggtcctcctggcacgggtaaaaccatgctcgccaaagctgttgcaaatcat
actactgcagcctttattagggtagttggctcagaatttgttcagaagtatttgggtgag
ggacccagaatggttcgtgatgtgtttcgtcttgccaaagaaaacgcgcctgcaataata
tttattgacgaggtagatgcaattgctactgccaggtttgatgctcagactggagctgat
agagaagtgcagcgaattctmatggaactcttaaatcagatggatgggttcgaycagacc
gtcaatgttaaggttataatggcaactaaccgagctgatactttggacccggcccttctt
cgtcctggtaggcttgaccgcaagattgartttcctttgcctgatagacgacaaaagagg
cttgttttccaggtttgcactgctaaaatgaatttaagtgaygaagttgacttggaagat
tatgtttctcggcccgacaagatcagtgctgccgagatcacggcaatttgccaagaagca
ggaatgcatgcagtccgcaagaaccgatatgttattcttcccaaggacttcgagaagggc
tacagaaccaacgtraagaagcccgacactgattttgatttttacaagtaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (41)   
   Pfam (41)   
All databases (46)   

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