KEGG   Cynara cardunculus var. scolymus (artichoke): 112525248
Entry
112525248         CDS       T05604                                 
Name
(RefSeq) ABC transporter B family member 15-like
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    112525248
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ccav02000]
    112525248
   04147 Exosome [BR:ccav04147]
    112525248
   04090 CD molecules [BR:ccav04090]
    112525248
Enzymes [BR:ccav01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     112525248
Transporters [BR:ccav02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    112525248
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   112525248
CD molecules [BR:ccav04090]
 Proteins
  112525248
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N RsgA_GTPase Zeta_toxin ABC_ATPase AAA_29 AAA_22 AAA_16 AAA_15 G-alpha nSTAND1 TMEM70 AAA_25 MeaB
Other DBs
NCBI-GeneID: 112525248
NCBI-ProteinID: XP_024991057
Position
LG 13:complement(1260180..1265071)
AA seq 1233 aa
MAKKKGMFHFADGIDKLLLLFGTLGCIGDGLMSPLTMIILSDIINDFGGNGLSFSNDVVN
KYALKLLVLAVGVGVAGFIEGICWTRTAERQISRLRMEYLKSVLRQEVGFFDRQVGSSTN
FEVISAISGDAQLIQDVMAEKIPNCVAQLSSLVFSIVVSFILSWRLAVASIPFALLFIVP
VLSIGVFLKALGMKMKDAYDIGGGVAEQAISSIRTVYSYVGEQQTIDKFSNALQTSMALG
IKQGFTKGLMIGSMGMVFAAWAFVFWVGGYLVTEKGESGGRVFISAICVIMAGLAAMSAL
PNVTFISEAIAATERMFKMISRAPLINPDDSKGKTLPSVRGDIEFRSVDFSYPSRPDTPI
LQELSLKVKAGKTIGLVGGSGSGKSTIISLLERFYDPVRGDILLDGHRIKRLQLKWLRSQ
MGLVNQEPVLFATSIKENILFGKEGVSDDLVENAAKAANAHNFIIKLPDAYETQVGQFGI
QLSGGQKQRIAIARALLKEPRILLLDEATSALDTESERVVQEALDQASVGRTTIIVAHRL
TTVRKADKIVVLQSGKVIESGSHEELMQKNDQEEGGAYYQMVQLQQSAKQNESGSPDSPY
TPTGQRTHERNFNPQTTRSPNSARSSLQNSPMSPFSMAHSYEESDEKIYNSSPSQWRLLK
MNAPEWGRAFLGCLGATGFGAISPIHAYCLGSVVSVYFLPDKNKVKSETTLYCVIFVGLG
VACFFTNLLQHYNFAVMGERLTKRVREKVLQNVLTFEVGWFDKDENTSAAVCARLATEAS
LIRSLVGDRISLLLQVFVSAFLAFIFAMIITWRIAIVMISMQPLLIASFYSKITLMKSMS
AKAKKAQNEGTQLASEAVVNHRTITAFASQERIMGLYAATQKGPRKESIKQSWFSGMGLF
TSQFVTTAAISLAFWYGGREMNKGLVTSKQMFQVFFILMTTGKNIADAGSMSSDLSKGGG
AVRSVLAVLDRKTEIDPDDSESLTVSGINGQIELMNVHFSYPSRPEQMIFQGLHLKIEAG
KTVALVGQSGSGKSTIIGLIERFYDPIKGCILIDERDIKNYNLRHLRSHIALVSQEPTLF
AGSIRHNIVYGKEEASEAEIMKAAELANAHEFISSMKDGYETYCGERGVQLSGGQKQRVA
LARAILKNPAILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKSDSIAV
IGNGKVVEQGSHSELLSMGNKGSYHSLIKLQHL
NT seq 3702 nt   +upstreamnt  +downstreamnt
atggcgaaaaagaaaggaatgtttcattttgcagatggcatagataagcttcttttgtta
tttggtaccttaggctgcattggagatgggttgatgtctcctcttacgatgataatcctt
agcgatatcatcaacgatttcggaggcaatggtctgtctttttccaatgatgtggtgaac
aagtatgcactgaagctgctcgtcctagctgttggcgttggagtagcgggtttcattgaa
ggaatttgctggacaagaacagctgaaagacaaatatcacgtctaaggatggaatacctg
aaatccgtactcaggcaagaagtcggtttctttgacagacaagttggctcttccaccaat
ttcgaagttatctcagccatttctggtgatgctcaattgattcaggacgttatggctgaa
aagatacccaactgtgtggctcagctgtcatcactagtattcagcatcgtagtgagtttc
atactttcatggcgacttgcagtggcttctattccttttgcacttctgtttatcgttcct
gtgttaagcatcggggttttcctaaaagctctagggatgaagatgaaggatgcttatgat
ataggtgggggggttgcagagcaggcaatatcatcaatccgaactgtctattcttatgtt
ggagaacagcaaacaattgataagttcagcaatgcacttcagacaagtatggcactaggg
ataaagcaaggatttacaaagggtttgatgatcgggagcatgggtatggttttcgcggcc
tgggcatttgtattttgggtcggaggctatcttgtcactgaaaaaggagaatctggtggc
cgtgtattcatttcagcaatctgtgtcatcatggcggggctggcggccatgagtgcactg
cctaacgtaacatttatttcagaggcgatagccgctactgaaagaatgtttaagatgatt
tcccgagctccgctcataaatcctgatgatagtaaggggaaaacgctaccatctgtgagg
ggagacattgaattcaggagtgttgacttctcatacccatcgagaccagatactccaatc
cttcaagaactcagcctcaaagtgaaagccggcaagacaataggtcttgtgggcggcagc
ggatcagggaagtcgacgattatttccttacttgaaagattttatgaccctgtgagagga
gatatccttctcgatggacacagaataaagaggcttcagcttaaatggttaaggtctcag
atgggattagtgaatcaagagccagtactctttgcaacatcaatcaaggaaaacatactt
tttgggaaggaaggagtttcggatgatcttgttgagaatgcagctaaagcagcaaacgca
cacaatttcatcatcaagttacccgacgcttatgaaacacaagttgggcaatttgggatt
caattatctggtgggcaaaagcaaagaatagcgatagcaagagctctgctcaaagaacca
agaatcttattgttggatgaagcaacaagtgcgttagatacagaatcggaaagggttgtt
caagaggctctagaccaggcttcggtaggaagaacaacaatcatagttgcccatcgcctt
acaacagtccgtaaagcggataaaattgtggttctccaatcagggaaggttattgaatct
ggttcacacgaggagttaatgcaaaagaacgatcaagaagaaggtggtgcctactaccaa
atggtgcagttgcagcaatcagcaaagcagaatgaatcaggatcccctgattctccatat
acaccaaccggacaaagaacccatgaaagaaatttcaatccccagacaacccggagtccg
aatagtgcaagatcaagcttgcagaacagtccaatgtccccattcagtatggctcattct
tatgaagaaagtgatgagaaaatatataattctagtccttcacagtggcgtctcttgaaa
atgaacgctcctgagtggggacgagcatttcttgggtgcctaggagcaactggttttggg
gctatatcaccaatacacgcgtattgcttgggatcagttgtctcagtatacttcttgccc
gataagaacaaagtgaaatcagagacaacgctttactgcgtaatctttgtaggacttgga
gtcgcttgcttctttaccaacctactccaacactataacttcgcagttatgggggagcgt
ttaaccaagagggtgagagaaaaagtgcttcaaaacgtcctcacgtttgaagtcggatgg
tttgataaagatgagaacacgagtgcagcagtttgtgcacgacttgcaactgaagctagc
ttgataaggtccctcgttggagatcgcatatcgttgctccttcaagtctttgtcagcgcg
tttcttgcttttatatttgcaatgataatcacttggagaattgccattgtcatgatttca
atgcagcctttgctcatagcaagcttctactccaagataacactcatgaaaagcatgtct
gcaaaagccaaaaaggcacagaatgaaggaacccaactagcaagtgaagcagtagtgaat
catagaacaatcactgcctttgcttctcaagaaagaatcatgggactatatgcagcaaca
cagaaaggaccacggaaggaatccattaaacagtcatggttttcgggtatgggcttgttc
acttcccaatttgtgacaacagctgcaatatcgttggcattttggtatggtggaagagaa
atgaataaaggattggtaacctcaaaacagatgttccaggttttcttcatcttgatgacc
actggcaagaacattgcagatgcaggaagcatgagttctgatttatctaaaggtggaggt
gcagttaggtcggtgttagcagtactagacaggaaaacggagatcgacccagatgactct
gaaagtttaacagttagcggaatcaacggccaaatagagctgatgaatgtacacttctcc
tacccatcaaggcctgagcaaatgatatttcagggattgcatttaaagatcgaagcagga
aaaacagtagcacttgtgggtcagagtggttcaggtaaatccaccatcataggattgata
gaaagattctatgacccaataaaaggatgtatactcatcgacgaacgagacataaaaaac
tacaatctgaggcacttgagatcacatattgcgctagtgagccaagaaccaactcttttc
gcaggaagtattcgccataacatcgtctatggcaaggaggaagctagtgaagctgaaata
atgaaagcagcagagcttgcaaatgcccatgagtttataagttccatgaaagatggatac
gaaacttactgtggagaaagaggggtgcaactatcaggaggccagaagcagagagttgca
cttgctcgagcaatactcaagaatccagcaattcttttgttagatgaggccactagtgcg
cttgatagcgcgtccgagaatctggtgcaagaagcattggagaagatgatggttggcagg
acttgtgtagtagttgcacatcgattatcaaccatacagaaatctgattccatagctgtg
attggaaatggaaaagttgtagagcaaggatcacactctgaactgctttcaatggggaat
aaaggttcctaccactctctcataaagctgcaacacctatga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (20)   

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