KEGG   Corticium candelabrum: 134193761
Entry
134193761         CDS       T11492                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
cclm  Corticium candelabrum
Brite
KEGG Orthology (KO) [BR:cclm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclm03041]
    134193761
Spliceosome [BR:cclm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    134193761
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    134193761
SSDB
Motif
Pfam: MA3 MIF4G MBT Tudor_2 Tudor-knot Chromo_MORC2_6th zf-C2H2 C2H2_ASCIZ MSL3_chromo-like zf-C2H2_aberr 53-BP1_Tudor zf_C2H2-Disco
Other DBs
NCBI-GeneID: 134193761
NCBI-ProteinID: XP_062518579
Position
18:5761032..5782373
AA seq 1658 aa
MIDEEERSEDVPLDARPEPLPPVPKGRSARCVRLDVGARLEAQDLYKNWYPAKVVDVDDE
EKEVLIHFDGWNQRHDEWIGFDSPRLRAVTVQEKQESRVKITNRTFQIRPNVRVEARWKT
IGYFSGTVVAMNDDDSCQVLFDDGIEMKVMKCHIRMPKSKAVTPPDTSVCTEKAKRQERQ
TLLAEARRQRAIRRNSDGQPKSEPPSPRSPETKAKQHDGKCESESLLPVKHNLVAEMPLP
SFRTELNTPADVDLNTPTPPTTQSDDVVSKPEPAQDQLSMSVPSMVPMMNEKQVKQETMP
CSPVQDPIAIATRQPETVTPVVQPIVTTPTRPVHKPLIKRSTRTEPFVTRSKTKAADSRA
DKPSSRSFAPKEWVVVMDHNKYKCNVRGCDKAFRKASLLNYHVKYYHSAEQLESPCKKHK
AHSEQSTSGLGLISRLREPSLSETNVLPQPEVSGNDTQATPQSTDKQTAARQKSTSSLSP
VKEKKGSERPLFVLGARHPHEPLQPIHIQERRKFKKCYDWYWTGDMGDVDKAGDSSGDVV
RQLRSLLTVCHNDLAADLTAVDEMLRSVDMQISALKKLKNLQQKSTQKWKRRDELVDRRA
GGTPTANDNTEDAETVAHCEEKPMDEVCENRLTRSTSDEQASTSESRWTKSELKRERDNE
VDAADEKIDEEKLKNGSRVERMEDVMFLPETCNEDGTFAANSESSDGMMSMGHDRVFGLF
MDGGSVDKQTAERDREEKQHAKSVSLDEVMTSHHDVKMTSLSLDSQGKKADDQMDEDRLH
SLALKIHADDMDQATSDGLKSPGSSGSSTLPDMSENMEVSDNLLDGNADGCHVEGDEDME
GNDQDETRLLHWIEQLQDELEERMTFLESQLAVLDGNDAKTLEQLRKMADNIETTLETET
LDVVKVALTAFKMADASEKQREKSDSEESSTSSSGDAGSSESEHDAATVLVQMASTPPRQ
GKNDAKSKEEENASDEPPAKKSKPEPDPLATRTGGAYIPPAKLRMMQQQIEDKSSAAYQR
IAWEALKKSINGLINKVNTSNVAVIVQELIQENIIRGRGLLVRSLLQAQAASTTFTNVYA
GLVSVVNTKFPQNGELLLRRLIYQFRRSFRRNNKPLCLSSATFIAHLVNQQVAHEVLALE
LLTLLLETPTDDSVEIAVAFLKECGLKLTEVTSRGVHFVFERIRGILTEATIDKRVQYMI
DVLFAVRKDKYKDYPAVISELDLVEESEQVTHLLTLEDDGDPEDHLNVFKFDPEYLENEE
KYKTIKADILGEGASDESGSGEESEEEDDDDEEQTTEITDATQTNIMGLRRTVYLTIMSS
VDYEECAHKMVKMQLKPGQEGEVCFMIIECCSQERSFLKFYGLLAERFCRIDKSYEEQFT
ACFQEQYETIHRLETNKLRNIAKLFAHLFYTDAIPWTCLVCVHLNEDETTSSSRIFIKIL
FQEIAEFLGLPKLNERLKDPTLSAYFEGLLPRDNPRNTRFSINFFTSIGLGGLTDELREH
LKSAPKMIMSQQRNVESSDSSSGSGSSGSDSSSSDDSDSDSDGSEEDRRRHQIERGRRHR
PEASTRSRNDREEERRREHHRDDRRGRDDDRARREGTRDERRSNNKDRSERDSPRRDRRE
RERDDRRRDEKRGRERRRGDSDERTERRDTRYGRGRDD
NT seq 4977 nt   +upstreamnt  +downstreamnt
atgatagacgaagaagagagaagtgaagacgtgccgttagacgcgcgtcctgagccgttg
ccgccggtgccaaagggacggtctgctcgatgtgtgaggttggatgttggagctcgactc
gaagctcaagatttgtacaaaaattggtatcctgcaaaggttgttgatgttgatgacgaa
gagaaggaggttctgattcactttgacggttggaatcagagacacgacgagtggatcggt
tttgacagtccgagactgagagcagtcacagttcaagagaaacaagaatcacgagtgaaa
ataactaacagaacgttccagattcgaccaaacgttcgtgttgaagctcgttggaagaca
attggatacttttctggaaccgttgttgcaatgaatgatgacgattcgtgtcaggttttg
tttgatgatgggatagagatgaaggtaatgaagtgccacatacgaatgccgaagtctaaa
gctgtaactccacctgacacatcggtctgtactgagaaagcaaaacgtcaagagcggcaa
acattattagcagaagccaggagacagagggctataagacgcaacagtgatggtcaacca
aagtctgaaccaccgtctccacggtctcctgaaactaaggcgaaacaacatgatggcaag
tgcgaatcagaatcactgttgccagtaaaacataatttagttgctgagatgccactccca
tcttttcggactgaactcaacacacctgcagatgttgacttgaacacacccacaccaccc
actacacagtcagacgatgtcgtttccaaaccagaaccagcacaagatcaactgtccatg
tcggtgccatcaatggttccgatgatgaacgagaagcaagtgaagcaagaaacaatgcct
tgctctccagttcaagatcccattgccatagcaacccgtcagcctgagacagttacacca
gtagtccaaccaatagtgaccacgcccacgcgtccagtacacaagccgttgatcaagaga
tcgaccagaacggaaccgtttgtgacacggagtaaaacgaaggcagcagactcgagagcc
gacaagccttcgtctcgttcatttgcaccgaaagagtgggtggttgtgatggatcataac
aaatacaaatgtaatgtacgtggatgtgacaaagcgtttcggaaagctagtttgctgaat
taccatgtgaaatattatcattcagcggagcagcttgagagtccgtgcaagaagcacaaa
gcacacagcgaacaatcaacatccggtttagggttgatttcaaggttgcgagaaccgtct
ctgtctgaaaccaatgtactacctcaacctgaagtgtctggcaatgatactcaagcaact
ccacaatcgacagacaagcagacggccgccagacagaaatcgacgagcagcttgagtcca
gtgaaagagaagaaaggcagtgaacggccactctttgtgttgggtgcgcgtcatccacac
gaaccactacaaccaattcatatccaagagagaagaaaatttaagaaatgttatgattgg
tattggactggtgacatgggggatgtggataaggcaggagactcgtctggtgatgtcgtc
aggcagctgcgttcgttgctcactgtctgccacaatgacttggctgctgatcttacggcc
gtcgatgagatgttgagaagtgtagatatgcagatcagtgcgttgaaaaaactcaagaat
cttcaacaaaaatcaactcagaaatggaagagaagggatgaactcgtagataggagagca
ggtggcactccaactgcaaatgacaacacagaagatgccgaaacggtcgcacactgtgag
gagaaaccaatggacgaagtgtgtgaaaatcgattaacacggagcacgagtgacgagcaa
gcttcgacttcagaaagtagatggacaaaaagcgaattaaaacgagaaagggacaatgaa
gtggacgcagcagatgaaaaaattgatgaagagaaactgaagaatggaagtcgtgtagaa
aggatggaagatgttatgtttttgccagaaacgtgtaatgaagatggcacgtttgctgcc
aattcggagtcatcagatggaatgatgtcaatgggacatgatcgtgtatttggtttgttt
atggacggcggcagtgtcgacaagcagacagcagagagagacagagaagagaaacaacat
gctaagtctgtttctcttgatgaggtgatgacgtcacatcatgacgttaaaatgacgtca
ctgagtctagacagtcagggtaagaaagctgacgaccagatggatgaggatcggcttcat
tctctggcattgaaaatacacgctgatgacatggatcaagctacgtctgatggtctgaag
tcaccggggagcagcggatcgagcactcttccagatatgagtgaaaatatggaagttagc
gacaacttgttagatgggaatgcggatggttgtcatgtagagggagatgaggacatggag
ggcaatgaccaagacgagacacggttgttgcattggatcgagcaattacaagatgagttg
gaggagagaatgacctttctcgagtctcaattggctgttttggatgggaacgatgcgaag
acgttggaacagttgagaaagatggcggacaacatcgagacgacattagagacagagaca
ttagacgtagtgaaagtcgcgttaacagcgttcaagatggcggatgcaagtgaaaaacaa
agagagaaatcagattctgaggagagttcaacgtcgtcatctggtgatgccggcagttca
gagtcggagcacgatgcagcgacagttctcgttcaaatggcatctacacctcctcgtcaa
ggcaagaatgatgcaaaatcgaaggaggaggaaaatgctagtgatgagccgcctgctaaa
aagtcaaaaccggaacccgatcctttggctaccagaacaggaggtgcttacatcccacct
gctaagctgaggatgatgcaacagcaaatagaagacaagagcagtgccgcatatcaacga
atcgcatgggaagcgctcaagaaaagcatcaacgggctcatcaacaaagtgaacacatcc
aacgttgcagtcatcgttcaagaactcattcaagaaaatatcattcggggcagaggtttg
ttggtgcgctctctcttgcaggctcaggcagcatctacaacctttactaatgtgtatgct
ggtttggtgtctgtcgtcaatacgaagtttcctcagaatggcgagcttcttcttcgccgt
cttatctatcagtttaggcgttcatttagaagaaacaacaagcctctttgcctttcttcg
gctacctttattgctcatttggtcaatcaacaagtggctcatgaggtgctggcactcgag
cttcttacgctcttactagagactccaaccgacgacagtgttgagattgctgttgctttt
ctgaaagagtgtggactcaagttgacggaggtcacatcacgaggagtccacttcgtgttt
gaacgcattcgtggaattctgacggaggcaacgattgataaacgtgtgcagtacatgatt
gacgtactgtttgcagtcaggaaagacaagtataaggattatccggctgtcatctcggag
ctggacttggtcgaagagtccgaacaagtcacacatctgttgacactggaagatgatggc
gaccctgaggatcacttgaatgtgttcaagtttgatccagaatatcttgagaatgaagag
aaatacaagactatcaaagctgacatcttgggagagggagcatcagatgagtcaggcagt
ggtgaagaaagtgaagaggaagatgatgatgacgaagaacaaacaactgaaattactgat
gcaacacagacaaacattatgggtttgagaaggactgtgtacctgacaatcatgtcaagt
gttgactatgaagagtgtgctcacaaaatggtaaagatgcaactaaagcctggacaggag
ggtgaagtgtgttttatgatcattgagtgttgcagtcaagaaagatcgtttctcaagttt
tatgggttgttggctgagagattctgtcgaattgacaagtcatatgaagagcaatttact
gcgtgttttcaagagcagtatgagactatccatcgtttggagacgaacaagctccgcaac
attgccaagctatttgctcatctcttctacacagatgccattccttggacttgccttgtc
tgtgttcatctcaacgaagatgaaactacttcctccagtcgcatattcatcaagatattg
ttccaagagattgctgagtttttaggactccctaagcttaacgaacgcttgaaagacccg
acactgagtgcatactttgaaggtttgctgcctcgtgataatccgaggaatactcgtttt
agtatcaatttctttacgtctattggattgggtggtttgactgatgagttgagggagcat
ttgaagtctgcgccgaagatgattatgtcacagcagagaaatgtggagtcttcagattcg
agttcaggttcagggtcatctggcagtgattcttcaagctcggatgatagtgactcagac
tcagatggctcagaagaagacagaagacgtcatcaaatagaacgaggcagaaggcacaga
cctgaagcctctacaagatccagaaacgacagagaagaggaaagacgtagagaacaccac
agagatgacagaaggggaagggacgacgaccgcgctagacgtgaagggacacgcgatgaa
agaagaagcaacaacaaagacagaagtgagagagacagtccaaggagagatcgtcgagag
agagaaagggacgaccgacgaagagacgagaaacgaggacgggagagaagaagaggcgat
agtgatgagaggacagagagaagagacacacggtacggaagaggacgagatgattga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (16)   

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