KEGG   Coregonus clupeaformis (lake whitefish): 121581022
Entry
121581022         CDS       T08357                                 
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X1
  KO
K04852  voltage-dependent calcium channel R type alpha-1E
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010  MAPK signaling pathway
cclu04020  Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    121581022
   04020 Calcium signaling pathway
    121581022
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cclu04040]
    121581022
Ion channels [BR:cclu04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   121581022
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 121581022
NCBI-ProteinID: XP_041752258
Position
14:30860516..30952669
AA seq 2188 aa
MAKRLECTEPYFIGIFCFEFGIKLVALGFVFHKGSYLRNGWNIMDFIVVVSGILATAGAH
MNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIG
LEFYSGKLHHTCLPTADILENETMDTTEVEFACGVRKCPEKYDCIGSWIGPNNGITQFDN
ILFAVLTVFQCITMEGWTAVLYNTNDALGSMWNWMYFIPLIIIGSFFVLNLVLGVLSGEF
AKERERVENRRAFMKLRRQQQVERELNGYRAWIDRAEEVMLAEENKNSGRSALDVLKRAT
SKNAKRRGVPGDAEISTIGAPRMRIRTVRRGPVAYIRRKERMLRISLRRMVKTDTFYWTV
LSLVALNTICVAIVHHNQPKWLSTFLYYAEFVFLGLFLAEMFLKMYGLGFRLYFHSSFNC
FDCGVIVGSIFEVVWGFFRPGMSFGISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKS
IISLLFLIFLFIVVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVM
YNGIRSQGGVQYGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEEEEFF
NARYARGRDGPMSERRRRPYLRRKKAIHRGRMAVPEEEEESGAAGGDDQPPNGANAFSNR
RDRRRRGGGGGGGRGGRSVWEQRANQLRKRRQMESQEVLFGGSPTEDTTDTPTTAYRAPT
LSPDASPGHLPESPMSGIMPMPEPPMSIAIPLPEPPDSEPMPLFTLAEERAVNHRPAGGD
RRHRVARKFRPGPGGAEEGGAARHRRHRHREARAEAKSRESPQEEVSESGSRERKILEER
EEKEEKDKKGEKGEVAEVEGGVLGQDEGGASIINLESEEEHLRVCIADIPEPPLCDDFPE
SLPPPLLDPPPQMEEGEVGETGQCEPLSQDPAVEPAPEQFTDPPELQAASGVNDSENNPD
TLNREKGEEPGQGLDSQTSVIIEMSGEQPLLEIIPVTALHSSKEMEVYQPERKEKEKEKQ
EEAQEEEEEEASPPKPVPPDSMFLFKASNPIRRICHYVVTMRYFEMTILLVIVASSIALA
AEDPVCTNSDRNRVLRYFDYVFTGVFTFEMIIKMIDLGLLLHDGSYFRDLWNILDFIVVV
GALIAFALTNVIGNHKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFN
ILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSIDTEKECQGYYIDYARDKKELKKREWKRH
EFHYDNVCWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRGNRMEMSIFYVVYFVVFP
FFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFTISAKPLTCYMPQNRQTFQYRL
WHFVVSPSFEYTVLVMIALNTVVLMMKYNSAPAAYDTVLKHLNTAFTVLFSLECILKIMA
FGFVNYFRDTWNIFDFITVLGSITEIVVDLQSINTFNMSFLKLFRAARLIKLLRQGYTIR
ILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNDENHINQHNNFKTFSGALM
LLFRSATGESWQEIMLSCLGGQECEPDSSMAPMTMSPDHEGGCGTDFAYCYFVSFIFFSS
FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWGEYDRAACGRIHYTAMYEMLTHM
SPPLGLGKKCPRGMAYKRLVLMNMPVDEDMSVHFTSTLMSLIRTALEIKIARGQGMSGED
RVALDTELQKEISVIWPYLPQKTLDVLVPINKDSDMTVGKIYASMMIMDYFKQNKAKKLR
AQLEAQKASLMPFQRLDASTLSEDILYNAQPLPCMPLSAGSALTRGGLVALSPLSQDLFT
MQPMTDQDISSQHSRVSAGECSGLIPYPLELPFGKGLGVRASSMPRLAVEPQMEMASGSM
KRSSSTVAEEKKSPDRLYRPRHKSYKSAVSRSDRKRQLDTEKEHGRSKERRHLLSPDTSR
CNSEERSLQPSCSPSRERTHPLDKQGNSSDSPIPTSESSTPSRRPLSQTPTRSHPHISYS
PLVCRTHPPSGDDDDDRGSPETQRRGEASREEAGGEGQTGARGHRHHHQQCSTPRRYPSE
PYLALQEDEHSPDPSGFMETLTFEAAVATSLGRANTVSSTSSSSFSSARRGSRSGWQIPN
GHFRKRLAQTVSVAGCEPLSDTEEDDHC
NT seq 6567 nt   +upstreamnt  +downstreamnt
atggccaaaagactggagtgtactgagccttacttcatcgggatcttctgctttgagttt
ggaatcaagctggtggccctgggctttgtgttccataaaggctcctacctgaggaatgga
tggaatatcatggacttcatcgtggtggtcagtggaatactggcaacagcaggggcccac
atgaacataccagtggatctgcggaccctgagggcagtgagagtcctgaggccccttaaa
ctggtctctgggatcccaagcttgcagatcgtgctgaagtccatcatgaaggccatggtg
cccctgctccagatcggtctgctcttgttcttcgccattcttatgttcgccatcatcggc
ctggagttctacagtgggaagctacaccacacctgtctacctactgctgacatccttgaa
aatgagacgatggatacgaccgaggtggagtttgcgtgtggagtgaggaagtgtccggag
aagtatgactgtattgggtcatggattggccccaacaacggcatcacccagtttgacaac
atcctgttcgctgtgctcactgtcttccagtgcatcaccatggagggatggacagctgta
ctttacaataccaacgatgccttgggctctatgtggaattggatgtactttattcctctc
atcatcatcggctcattcttcgtgctcaacctggtgttgggagtcctctctggggagttt
gccaaagagagggagcgggtggagaacaggagagccttcatgaagctgagacgtcaacag
caggtggagagagaactcaacggttacagagcctggatagaccgagcagaggaggtgatg
ctggctgaggagaacaagaattcagggagatctgctttagatgtgctgaagcgggccacc
agtaaaaatgctaagcgtagaggagttcctggggatgcagagatctccactataggagca
cctcgtatgcggatccgtacagtgcggcgtggcccggtagcgtatatacgtcgtaaggag
cgtatgctgcgtatctcactgcggcgcatggtgaagaccgacaccttctactggaccgtc
ctcagcctggtggctctcaacaccatctgtgtggccatcgtacatcacaaccagcccaaa
tggctctccaccttcttgtactatgcagagtttgttttcctggggctctttttggcagag
atgttcttaaagatgtatggcctgggtttccggctctatttccactcttccttcaactgc
ttcgattgcggagtgatagttggcagcatctttgaggtggtgtggggcttcttccggcct
ggcatgtcctttggcatcagcgtcctgagggcactgagactcctgaggatctttaagatc
accaagtactgggcatctcttaggaacctggttgtgtctctcatgagttccatgaagtcc
atcatcagtctgctcttcctcatcttcctcttcatcgtcgtcttcgccctgctgggcatg
cagctctttgggggcaggttcatctttgaagattacactcctaccaactttgacacattt
ccagctgccatcatgacagtgttccagattctgactggtgaggactggaatgaggtgatg
tacaatgggatccgctcccaaggaggagtgcagtacggcatgtggtcctccatatacttc
atagtgctcaccctgtttgggaactatacactactcaacgtcttcttggccatcgctgtg
gataaccttgccaacgcacaggaactcaccaaggacgaagaggaggaagaggagttcttc
aatgcaagatacgccagaggcagagatggcccgatgtctgagaggaggaggcggccctac
ctccgcaggaagaaggccatccacaggggccgtatggccgtccccgaagaggaggaggag
agcggcgccgcaggcggagacgaccaaccccccaacggcgccaacgccttctccaaccgc
cgtgacagacggaggagggggggaggaggaggaggaggaagaggcggaagatccgtgtgg
gagcagagggccaaccagctacgcaagcggcgccagatggagagccaggaggtgctgttt
ggaggcagccccaccgaggacaccactgacacccctaccaccgcataccgcgcccccacc
ctttccccagacgccagccccggtcacctgcccgagtcgcccatgtccgggatcatgccc
atgcctgaacccccgatgtccatcgccatcccgctgccggaacctccagactctgagcct
atgcctctgtttacattggctgaggagagagcggtgaaccatcgccccgccggtggggac
aggaggcacagggtggcccggaagttcaggcctggccctgggggggcggaggagggaggg
gcggcgcggcataggaggcaccgccatcgtgaggcccgggctgaggccaagagcagagag
tccccacaggaggaggtcagcgaatcaggcagccgcgagaggaagatactagaagagagg
gaggagaaggaagaaaaagataagaagggggaaaaaggagaggttgctgaggtggaggga
ggagtgttgggccaggacgaaggaggagccagcattatcaacttagagagtgaagaagag
catctgagagtgtgtattgcagacatccctgagcctcccctatgtgatgacttccctgag
tccctacccccacccctgctggaccctccaccccagatggaggagggcgaggtgggggaa
actgggcagtgtgagcccctgtctcaggaccctgcagtggagccagctccagaacagttc
acagaccccccagagctccaggcggcatccggcgtcaatgattcggagaacaacccggac
accctgaaccgtgagaagggtgaggagccaggccaaggcctagacagccagactagtgtg
atcatagagatgtctggagaacagccactgctggagatcatccctgtgacagctttacac
agcagcaaagagatggaggtgtaccagcctgagaggaaggagaaggagaaggaaaagcag
gaggaggcgcaggaggaggaggaggaggaggccagccctcccaaacctgtacctcctgac
agcatgttcctcttcaaggcatccaatccgatcaggaggatctgtcactatgtggtgacc
atgcgctactttgagatgaccatcttgctggtgatcgtggctagcagcatcgctctggct
gctgaagaccctgtgtgcaccaattctgacagaaacagggttctccgttactttgattac
gtctttactggagtcttcacgtttgaaatgatcataaagatgattgacctgggcctactt
ctgcacgacggctcctacttccgtgacctgtggaatattctggacttcatcgtggtggtg
ggagctctgatcgccttcgctctgacgaatgtgattgggaaccacaaaggcagagacatc
aagaccatcaagtccctcagggtcctgagagtcctacgacctctgaagaccatcaagaga
ctccccaaactcaaggcagtgtttgactgtgtggtgacgtccctgaagaacgtcttcaac
atcctcatcgtctacaagctcttcatgttcatcttcgctgtcatcgccgtgcagctcttc
aagggaaagttcttctattgcaccgacagctccattgacacagagaaggagtgccaaggt
tactacatagactatgctcgagacaagaaggaattgaagaagagggagtggaagagacat
gagttccactatgacaatgtctgctgggctctgctcaccctcttcaccgtttccacagga
gagggctggccgcaggtcctgcagcattctgtggacgtgacagaggaggacaggggtcca
agtcggggcaacaggatggagatgtccatcttctacgtcgtctacttcgtggtcttccct
ttcttctttgtcaacatcttcgtcgctctcatcatcatcaccttccaggaacagggggat
aagatgatggaggagtgcagcttggagaagaacgagagggcatgcattgactttaccatc
agtgccaagcccctgacgtgctacatgcctcagaacagacagaccttccagtaccggctg
tggcactttgtggtgtcaccatcgtttgagtacacagtgctggtcatgatcgccctcaac
actgtggtgctcatgatgaagtacaactccgctccagcagcgtatgatacggtattgaag
cacctgaacacagccttcaccgttctcttttccctggagtgtatcctcaagatcatggcc
tttggttttgtgaactattttcgagacacttggaacatttttgacttcatcaccgtgctc
ggcagcatcactgagatcgttgtggatttacagtcaataaacacgttcaatatgagtttc
ctgaagctgttccgggctgccaggctgatcaagctgttgaggcagggctacaccatacga
atcctgctctggaccttcgtgcaatcgtttaaggcccttccttatgtttgtctgctcatc
gccatgctgttcttcatctatgccatcattgggatgcaggtgtttggaaacatcaaactg
aacgatgaaaaccacataaaccagcacaacaacttcaagaccttctccggtgcactgatg
cttctcttcaggagtgcgaccggggagtcatggcaggagatcatgctatcgtgtctgggg
gggcaggagtgtgagccagactcctccatggcacccatgaccatgtcccctgaccacgag
ggaggctgtggtactgacttcgcctattgctactttgtctccttcatcttcttcagctcc
ttcctgatgctgaatctgtttgtggctgtgatcatggataactttgagtacctgaccaga
gactcttccatcctgggacctcatcacctggatgagtttgtccgtgtctggggagagtac
gaccgtgcagcatgtgggcgtatacactacactgccatgtatgagatgttgacccatatg
tctccaccccttggtctggggaagaaatgccccagaggtatggcctacaagaggctggtg
ttgatgaacatgccagtggatgaggacatgtcagtccacttcacctccaccttgatgtct
ctcatccgcaccgctctggagatcaagatcgcacgaggtcagggaatgagtggggaggac
cgagtagctctggacactgagctacagaaggaaatcagtgtgatatggccgtacctcccc
cagaagactctggatgtactggtgcccatcaacaaagattccgacatgacagtaggtaag
atatatgcctccatgatgatcatggactacttcaaacagaataaagccaagaagctgaga
gcacaactggaagcacagaaggccagcctgatgccgttccaaaggctggatgcctcgacc
ctctctgaagacattctgtacaatgcccagcccctgccctgcatgcccctcagtgccggc
tccgccctgaccagaggaggcctggtggcattgagtcctctctcccaggacctgttcacc
atgcagcccatgactgaccaggacatcagcagccaacactccagggtgagtgcaggggag
tgcagtgggttgattccttacccactggagctcccgtttggcaaggggctgggtgtacgg
gcctcctccatgccccgtctggctgtagagccacagatggagatggccagtggctctatg
aagcgttcctcgtccactgtggctgaggagaagaagagtcctgatagactgtacagacca
cgccacaagagctacaagtctgccgtgtcccggtcagacaggaagaggcagttggacacg
gagaaggagcacgggaggtccaaagagcgccgccacctcctctctccagacacatcccgc
tgtaactctgaggagaggagtctgcagccctcatgctcccctagccgagagcgcacacac
cctctggacaaacagggcaacagctccgacagccccatccccacctctgaatctagtacc
cctagccgccgccccctgtcccagaccccaactcgctcccatccccacatctcctactcc
cctctggtgtgtcgcacgcaccctccctctggggacgatgatgacgacaggggcagccca
gagacccagaggcggggggaggcctccagagaggaggcagggggagagggacagaccggg
gcaagaggtcatcgccaccaccaccagcagtgctccaccccgcgtcgctacccgtcggag
ccctaccttgccctgcaggaggacgagcacagtcctgacccctccgggttcatggagaca
ctgaccttcgaggcggcggtggccactagcctgggacgcgctaacacggtcagctccacc
tccagctctagcttcagctcggcccgaaggggctccaggagcggttggcagatccccaat
ggacacttccggaaacgcctggctcagaccgtctctgttgcaggctgtgagccactcagc
gacacagaggaggacgaccactgctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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