KEGG   Corallococcus coralloides: COCOR_07137
Entry
COCOR_07137       CDS       T01780                                 
Name
(GenBank) hypothetical protein
  KO
K06958  RNase adapter protein RapZ
Organism
ccx  Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:ccx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccx03019]
    COCOR_07137
Messenger RNA biogenesis [BR:ccx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     COCOR_07137
SSDB
Motif
Pfam: RapZ-like_N PapZ_C AAA_18 AAA_22 AAA_33 AAA_29 AAA_21 AAA_28 ABC_tran nSTAND_NTPase5 AAA_23 AAA_16 AAA_24 Viral_helicase1 nSTAND6 Rad17 AAA_30 Zeta_toxin CoaE PRK MeaB RsgA_GTPase nSTAND3 SKI NTPase_1 Herpes_Helicase
Other DBs
NCBI-ProteinID: AFE07345
UniProt: H8MIE9
Position
complement(8965573..8966436)
AA seq 287 aa
MTAPAKQIIVITGMSGSGKSTAIRALEDAGFFCIDNLPVLLLPKLTELAGGGNIERMALV
IDAREGVFLKDAPRVLAEVRRAGHQVDVLFLDASDDSLMRRFSETRRRHPLAPEGTVAEG
IHREREALKDLRELADQVIDSSALNVHDLKRMVQGRFSPEPTTGPSLSIMSFGYRYGVPP
QADLVFDVRFLPNPYFVPELKGLTGKNPKVSGYVLEREETQAFLEKVVDLCRFLFPRYQK
EGKAYLTVALGCTGGKHRSVALAAEMVRRLSADYGRVQLWDRDIEKE
NT seq 864 nt   +upstreamnt  +downstreamnt
gtgaccgcccccgcgaagcagatcatcgtcatcaccggcatgtcaggttccggtaagtcc
accgccatccgcgcgctggaggacgccggcttcttctgcatcgacaacctgccggtgctc
ctcctgcccaagctcacggagctggcgggaggcggcaacatcgagcgcatggcgctggtc
atcgacgcgcgcgagggcgtcttcctcaaggacgcgccccgcgtgctcgcggaggtgcgc
cgcgcgggccaccaggtggacgtgctcttcctggacgccagcgacgacagcctcatgcgc
cgcttcagcgagacgcgccgccgccacccgctggcccccgagggcacggtggcggagggc
atccaccgggagcgcgaggcgctgaaggacctgcgggagctggcggatcaggtcatcgac
tcgtcggcgctgaacgtgcacgacctgaagcgcatggtgcaggggcgcttcagcccggag
cccacgacggggcccagcctgtccatcatgtccttcggctaccggtacggcgtgccgccg
caggcggatttggtattcgacgtgcgcttcctgccgaacccgtacttcgtgccggagctc
aaggggctcacgggcaagaacccgaaggtgtccgggtacgtgctggagcgcgaggagacg
caagcgttcctcgagaaggtcgtggacctctgccggttcctgttcccccgctaccagaag
gagggcaaggcgtacctcacggtggcgctggggtgcacgggcggcaagcaccgctcggtg
gcgctggcggcggagatggtgcgccggctgtccgcggactacggccgcgtgcagctgtgg
gaccgggacatcgagaaggagtag

  All links  
Gene (6)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (33)   

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