KEGG   Colwellia sp. PAMC 20917: A3Q34_06560
Entry
A3Q34_06560       CDS       T04511                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10943  two-component system, response regulator FlrC
Organism
coz  Colwellia sp. PAMC 20917
Pathway
coz02020  Two-component system
coz02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:coz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    A3Q34_06560
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    A3Q34_06560
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:coz02022]
    A3Q34_06560
   02035 Bacterial motility proteins [BR:coz02035]
    A3Q34_06560
Two-component system [BR:coz02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   A3Q34_06560
Bacterial motility proteins [BR:coz02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    A3Q34_06560
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_2 AAA_5 HTH_30 FleQ MerR HTH_24 AAA_16 HTH_20 HTH_11 HTH_23 Sigma70_r4_2 AAA_7 HTH_Tnp_ISL3 HTH_28 AAA OKR_DC_1_N DUF2089 nSTAND3 AbiEi_4 AAA_19 HTH_AsnC-type
Other DBs
NCBI-ProteinID: AOW76549
UniProt: A0A1D8RTX1
Position
complement(1535246..1536586)
AA seq 446 aa
MSQSKILVVEDDAGLREALMDTLKLSGYQCIEAQSGEDALLTLKEQSVDLVVSDVQMDGM
SGLTLLNSIKRNWPNLPVLIMTAYGTIHDAVQAMRDGACNYMAKPFAPEVLLNMVNQYVP
LNVTSRHEPVVADAQSIELLALAKKVATTDASVMVLGPSGSGKEVLAQYVHYHSNRSDKP
FVAINCAAIPENMLEATLFGYEKGAFTGAIQACPGKFEQAQGGTILLDEITEMDLGLQAK
ILRVLQEREVERLGGRKTIKLDVRVIATSNRDLRVAVKDGIFREDLYYRLNVFPLTWLAL
NKRRDDIVPLAKHLITQASLANNMAIPELTASARNKLTSYDWPGNVRELDNVIQRAIILH
SDQIINAGDLLIENFDSEIITDVALENNSEDMLGNELKVQEHQIILDTLTACQGSRKDVA
ERLGISPRTLRYKIARMRDSGIQIPA
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgagtcaaagtaaaatattagttgttgaagatgatgcaggattacgtgaagccctgatg
gatactttaaagttatcaggttatcaatgtattgaagctcaatcaggtgaagatgcttta
ctcacgcttaaagaacaaagtgttgatctcgtcgttagtgacgtgcaaatggatggtatg
tcgggcttaacactactcaatagtattaaaagaaattggccaaatttacctgtgctgata
atgacggcatatggtacgattcatgatgctgttcaagcgatgcgtgatggcgcctgtaat
tatatggcaaaaccttttgcgccagaagtgctgctcaatatggttaaccaatatgtgcca
ttgaatgtgactagtcggcatgaacctgtggttgctgacgcacaaagtattgaactatta
gcgttagcaaagaaagtcgcgaccacagatgcttctgttatggtgctcggccccagtggc
tctggcaaggaagtattagcacaatacgttcattaccattcgaaccgaagtgataagccc
tttgttgctataaactgtgctgcaattccagagaatatgctggaagcgactttatttggt
tatgaaaaaggtgcctttaccggagccattcaagcgtgcccaggtaaatttgaacaagca
cagggcggtactattttattagacgagatcactgaaatggatcttggcttacaagcaaaa
attttacgggtcttacaagagcgagaagttgaacgcttaggaggtcgtaaaacaattaag
cttgatgttcgtgttatcgcaaccagcaaccgtgatttaagagttgctgtaaaagatggt
atcttccgtgaagatctctactaccgtttaaatgtctttccattaacttggttagcatta
aataaacgcagagatgatattgtgccattagccaaacatttaattactcaagcatcgtta
gcgaataacatggctattccagaactaaccgcttcggcgagaaataaactgacgagttac
gattggccaggcaatgttcgtgaattagacaatgttattcaacgagccattattttgcat
agcgaccagattattaatgccggtgacttgttaattgaaaatttcgacagtgaaattatt
actgatgtggcgttagaaaataatagcgaagacatgcttggtaatgaattaaaagtacaa
gagcatcaaattattcttgataccctcaccgcttgccaaggtagccgtaaagatgttgct
gaacgattaggcattagccctagaacgcttcgctataaaatagcaagaatgcgtgattcg
ggcattcaaataccagcctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (28)   

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