KEGG   Colwellia sp. PAMC 20917: A3Q34_15600
Entry
A3Q34_15600       CDS       T04511                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
coz  Colwellia sp. PAMC 20917
Pathway
coz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:coz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A3Q34_15600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:coz03019]
    A3Q34_15600
   03016 Transfer RNA biogenesis [BR:coz03016]
    A3Q34_15600
Enzymes [BR:coz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     A3Q34_15600
Messenger RNA biogenesis [BR:coz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     A3Q34_15600
Transfer RNA biogenesis [BR:coz03016]
 Prokaryotic type
  tRNA degradation factors
   A3Q34_15600
SSDB
Motif
Pfam: RNase_PH S1 RNase_PH_C PNPase KH_1 S1_RRP5 OB_RRP5_4th KH-I_KHDC4-BBP KH_2 aRib KH_SLS1_2 S1_2
Other DBs
NCBI-ProteinID: AOW78139
UniProt: A0A1D8RYE9
Position
3636107..3638224
AA seq 705 aa
MFNTVTKTFEFGQHTVTLETGAIARQATCAVMASMDDTCVLVSVVGKKEAKPGQDFFPLT
VNYQERTYAAGKIPGGFFKREGRPSEEETLICRLIDRPIRPLFPDGFTNEVQVVITVVSA
NPEIAPDIISLLGTSAALAISGMPFSGPVGAARVGYTDGKYILNPLQSELETSKLNLVVS
GTDSAVLMVESEADILSEEVMLGAVMYGHEQMQTAITAIKEMAAEVNNPKWDWVAPVKNA
DLIAKIAELSEAQVNEAYQITEKAVRYEKIKEIRDGVVETLLASDADLNVQEAKDLFHDL
EKTVVRGRITKGMPRIDGRDPEMIRALDVMTGVLPRTHGSAVFTRGETQALVTATLGTQR
DAQRLDTIMGEKTDAFMLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGMLAVMPSLEE
FPYAVRIVSEITESNGSSSMASVCGASLALMDAGVPIKASVAGIAMGLVKEGDDFVVLSD
ILGDEDHLGDMDFKVAGTTGGITALQMDIKIEGITKEIMQLALNQAKAARTHILSVMDEA
ISGHRDDISQFAPRIHTIKVSQDKIRDIIGKGGATIRMLTEETGTTIEIDDDGTVKIAAT
NGEQAEDAINRIKALTAEIEVGTIYQGKVVRIVDFGAFVNVLPGKDGLVHISQISDERVN
AVSDVLTEGQEVTVKVLEVDRQGRVRLSIKEATEKKEAPVADAAE
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgttcaatactgttacaaaaacatttgaattcggtcaacataccgttactttagaaaca
ggtgctatcgcacgtcaggcaacttgtgctgttatggcaagcatggacgatacgtgtgta
ttagtgtctgttgttggtaagaaagaagcaaaaccaggacaagatttttttccattaacg
gttaactaccaagagcgtacatacgcagccggtaaaatcccaggtggtttctttaaacgt
gaaggccgtccttctgaagaagaaacattaatctgtcgtttgattgaccgtccaattcgt
ccacttttcccagatggctttactaacgaagttcaagttgttattacggttgtttctgct
aacccagaaattgcccctgacatcatttctttattaggtacatctgcagctctagctatt
tcaggtatgccatttagtggtcctgttggcgcagcacgtgttggttatactgacggcaaa
tacattcttaacccattacaatctgaattagaaacgtctaagttaaacttagttgtttca
ggtactgattctgcggtactaatggttgagtctgaagctgatattttatctgaagaagtt
atgcttggcgctgttatgtatggccatgagcaaatgcaaacggctatcacagcaattaaa
gaaatggctgctgaagttaacaatcctaaatgggattgggttgcaccagttaagaatgct
gaccttattgctaaaattgcagaattaagtgaagcacaagttaacgaagcttaccaaatc
actgaaaaagctgttcgttacgaaaaaatcaaagaaatccgcgatggtgttgttgaaaca
ttattagcaagtgacgcagatcttaacgttcaagaagcgaaagatttattccatgactta
gaaaaaactgttgttcgtggtcgtatcactaaaggcatgcctcgcatcgatggtcgtgat
cctgaaatgatccgtgccctagacgtaatgacaggcgtattaccaagaactcacggttct
gcggtatttactcgtggtgaaacacaagcattagttacagctactttaggtacacaacgt
gatgcacagcgtcttgatacgattatgggtgagaagactgacgcatttatgcttcattat
aactttcctccatactgtgttggtgaaacaggttttgttggttctccaaaacgtcgtgaa
atcggccatggccgtttagcaaaacgcggtatgttagctgttatgccttcacttgaagaa
ttcccatatgcggtgcgtattgtttctgaaattacagaatcaaatggttcatcttcaatg
gcttctgtttgtggtgcttcattagcattaatggatgctggtgtgccaattaaagcttct
gttgctggtattgcaatgggcttagttaaagaaggcgacgattttgttgttctttcagac
attttaggtgatgaagatcacttaggtgacatggactttaaagtagcgggtactaccggt
ggtattactgcacttcaaatggacattaaaattgaaggtatcactaaagaaatcatgcaa
cttgctttaaaccaagcaaaagctgcacgtactcatatcttatctgtaatggatgaagct
atttctggtcaccgtgatgatatttcacagtttgcaccacgcattcataccatcaaagtt
agccaagataaaattcgtgacatcattggtaaaggtggtgctactatccgcatgcttacc
gaagaaacaggtacaactatcgagattgatgacgatggtactgttaaaattgctgcaact
aatggtgagcaagctgaagatgcgattaatcgtattaaagcattaacggctgaaattgaa
gtaggtacaatttaccaaggtaaagtagtacgtatcgttgattttggtgcctttgttaac
gtacttccgggtaaagatggtttagttcacatctctcaaatctctgacgaacgtgttaat
gctgtaagtgacgtattaactgaaggccaggaagttacggttaaagtacttgaagtcgac
cgtcaaggccgtgtacgtttaagtattaaagaagcaactgagaaaaaagaagcaccagta
gctgacgctgctgaatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system