KEGG   Cynoglossus semilaevis (tongue sole): 103385480
Entry
103385480         CDS       T04866                                 
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103385480 (mbd4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csem03036]
    103385480 (mbd4)
   03400 DNA repair and recombination proteins [BR:csem03400]
    103385480 (mbd4)
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    103385480 (mbd4)
DNA repair and recombination proteins [BR:csem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     103385480 (mbd4)
SSDB
Motif
Pfam: MBD HhH-GPD RYDR_Jsol
Other DBs
NCBI-GeneID: 103385480
NCBI-ProteinID: XP_008317614
Position
10:complement(19679302..19683062)
AA seq 447 aa
MDGACTTLCHEETCGDTNDQSHEDKRCYISTLPPGWTKEVRQRTGGKTAGKLDVYMRSPK
GQMFRSKASLKAFLLKNTEDNLDIDLFDFTASRYDVILTSKRVPAAVKKKDRNEERETTE
TQERPPNTCRKAAAPHRRTRSKQTNSSCTDAWRSEVTDETEEQSDAAAVKDHEEVQSSPR
RLREKILRLTSSVGLNVPVEEDDDGDPRPSAPTVSVQPATESEDEGEAGLKQTDNKSTSE
EEPGADGAQGVTLEVSLPDTPVTPTRTSQNKSRSSDDKRKTSPYFDGKTLKNDLSPPRRK
AFRKWTPPRSPFNLVQETLFHDPWKLLVATIFLNKTSGRMAVPVLWQFFEQYPSAEETRA
ADWTTVSELLKPLGLFELRAKTLIRFSDEYLTKQWRYPVELHGIGKYGNDSYRIFCVGEW
REVTPDDHMLNKYHSWLWENHERLGFN
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggatggagcctgtacaacattatgtcacgaggagacctgtggagacacgaacgaccag
agtcatgaggacaaacgctgctacatttccactttgcccccaggctggacaaaagaggtg
agacaaaggacaggaggcaagactgcaggcaaactggacgtctacatgagaagtcctaaa
gggcagatgtttcgctctaaggcgtctctgaaagcttttctcctaaaaaacacagaggac
aacttggacatcgacctctttgatttcacggcgtccaggtatgatgtcatactgacctca
aaaagggttcctgctgcagtaaagaagaaagacaggaatgaagaacgtgagacgacagag
actcaggaacggcctccaaacacatgtagaaaagctgctgctcctcacaggaggaccagg
agtaaacagacaaacagcagctgtactgatgcttggaggtcagaggtcactgatgagact
gaggagcagtctgatgctgcagcagtgaaggaccacgaggaggtgcagagcagcccccgc
aggctgagggagaaaatacttcgactcacgtcatcagtcggactaaatgtacctgttgaa
gaggacgacgacggagacccccgaccgtctgctccaacagtcagcgttcaacctgccaca
gagagtgaagacgagggtgaagcaggactgaaacagactgacaacaagtctacatctgaa
gaggagcctggagctgacggagctcagggtgtgacgctggaggtgtccttacctgacact
cctgtcacaccaacaagaacatcccagaataagtccaggagctctgacgacaaacgcaaa
acaagtccttactttgacgggaaaacactaaaaaatgatctaagccccccaaggagaaag
gccttcaggaagtggacacccccccgctcccccttcaacctggtgcaggagacgctgttc
cacgatccctggaagctgttggtggccacgatattcctgaacaaaacaagtggcaggatg
gctgtcccagtgctgtggcagttctttgaacagtacccgtcggcagaggagaccagagca
gctgattggacgactgtgtctgaactgttgaagccactcggtctgtttgaactcagagct
aaaactctcatccgcttctcagatgaatatctcaccaaacagtggcgctaccctgtggag
ctgcatggtattgggaagtacgggaacgactcctacaggatcttctgtgtgggggagtgg
agagaggtgacgcctgatgatcacatgttgaacaaatatcactcctggctctgggaaaac
cacgaaaggttgggatttaactga

  All links  
Gene (33)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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