KEGG   Charadrius vociferus (killdeer): 104281606
Entry
104281606         CDS       T08577                                 
Symbol
CACNA1C
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1C
  KO
K04850  voltage-dependent calcium channel L type alpha-1C
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf04010  MAPK signaling pathway
cvf04020  Calcium signaling pathway
cvf04260  Cardiac muscle contraction
cvf04261  Adrenergic signaling in cardiomyocytes
cvf04270  Vascular smooth muscle contraction
cvf04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    104281606 (CACNA1C)
   04020 Calcium signaling pathway
    104281606 (CACNA1C)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    104281606 (CACNA1C)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    104281606 (CACNA1C)
   04261 Adrenergic signaling in cardiomyocytes
    104281606 (CACNA1C)
   04270 Vascular smooth muscle contraction
    104281606 (CACNA1C)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cvf04040]
    104281606 (CACNA1C)
Ion channels [BR:cvf04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   104281606 (CACNA1C)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH CAC1F_C PKD_channel
Other DBs
NCBI-GeneID: 104281606
NCBI-ProteinID: XP_009877934
Position
Unknown
AA seq 2108 aa
MNANAAAGLAPEHIPTPGAALSWQAAIDAARQAKLMGSAGNATISTASSTQRKRQQYGKQ
KKQGTTTATRPPRALLCLTLKNPIRRACISIVEWKSFEIIILLTIFANCVALAIYIPFPE
DDSNATNSNLERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFS
AILEQATKADGGNSIGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLL
HIALLVLFVIIIYAIIGLELFMGKMHKTCYHVQGGLIDTPAEDDPSPCAPQSAHGRQCQN
GTECKAGWEGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSL
VIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDID
PENEDEGMDEEKPRNMSMPTSETESVNTDNVPGADIEGENCGARLAHRISKSKFSRYWRR
WNRFCRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHYNQPDWLTEVQDTANKVLLALFT
AEMLLKMYSLGLQAYFVSLFNRFDCFIVCGGILETILVETKIMSPLGISVLRCVRLLRIF
KITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRRST
FDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNCILXCYS
FLQVGLNNLADAESLTSAQKEEEEEKERKKLARTASPEKKQEIEKTAVEEETKEEKIELK
SITADGESPPATKINVDDYQPNENEEKSPYPTTEAPAEEDEEEPEMPVGPRPRPMSELHL
KEKAVPMPDASAFFIFSPNNRFRVHCHRIVNDNIFTNLILFFILLSSISLAAEDPVRHLS
FRNQIIFYFDIVFTVIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQ
SSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIG
VQLFKGKLYSCTDSSKQTAAECRGYYITYKDGEVNQPMIQPRSWENSKFDFDNVLTAMMA
LFTVSTFEGWPELLYRSIDSHMEDVGPIYNHRVEISIFFIIYIIIIAFFMMNIFVGFVIV
TFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNQYQYKVWYVVNSTYFEYLMFV
LILLTSICLAMQHYGQSCMFKEAMNILNMLFTGLFTVEMVLKLIAFKPKGYFSDPWNVFD
FLIVIGSIIDVILSETNPAEHTQCSSSMNAEENSRISITFFRLFRVMRLVKLLSRGEGIR
TLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALNDTTEINRNNNFQTFPQAVL
LLFRCATGEAWQEIMLACLPDKKCDPESEPANSTEADHSCGSSFAVFYFISFYMLCAFLI
INLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPP
LGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTEGNLEQANEELRA
IIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVGKPSQRN
ALSLQAGLRTLHDIGPEIRRAISGDLTAEEELDKAMKEAVSAASEDDIFRRAGGLFGNHV
SYYQSDGRSAFPQTFTTQRPLHINKSGNNQGDTESPSHEKLVDSTFTPSSYSSSGSNANI
NNANNTALCRFPSPPSYPSTVSTVEGHGTPLSPTICVQEAPWKLPSKSSSSRDSQLAIVC
QEEVSQDETYDENLNEDIEYCSEPSLLSTEMLAYQDDENRQLTPPENNKGEDTRHSPKKG
FLCSSALGRRASFHLECLKRQKNQGVDVSQKTVLPLHLVHHQALAVAGLSPLLQRSHSPT
MFSRLCATPPATPCSRGWPQQTIPTLRLDGAESSEKLNSSFPSVHCGSRYTDTTGCSSPR
RARPVSLTVPSQSGGSSRQFHGSAGSLVEAVLISEGLMQFAQDPKFIEVTTQELADACDM
TIEEMENAADNILNGNSKQSPNGNLLPFVNCRDPGQDSAGEEEEEVQNPDCRKSQEELKD
SRIYISSL
NT seq 6327 nt   +upstreamnt  +downstreamnt
atgaatgccaatgcagctgcagggcttgccccagagcatatccctactccaggggcagct
ctgtcctggcaagctgcgattgatgctgccaggcaagccaaactgatgggtagtgctggc
aatgcaacaatatccacagctagctccacgcagagaaaacggcagcagtatgggaaacag
aaaaaacagggtaccaccacagctacgcgtcctccccgggcactgctgtgtttaacactg
aaaaatcccatccggagggcatgcatcagcatcgtcgaatggaaatcatttgaaataatt
attttactgactatttttgccaattgtgtggccttagctatctatatcccctttccagaa
gatgattccaatgccaccaattccaatctggaacgagtggaatatctctttctcataatt
tttacagtggaagcatttttaaaagtaatagcatatggacttctctttcaccccaacgct
tacctccgcaatggctggaatttactagattttataattgtggtagtagggctttttagt
gcaattttagaacaagcaaccaaagcagatggggggaattcaataggaggaaaaggtgcc
ggattcgatgttaaagcactgagggctttccgagtattacggccgttacggctggtgtct
ggagttcctagtctccaggtggttttaaattcaattatcaaggccatggtccctttgttg
catattgccctgctggtgctgtttgtcattattatctatgccatcattggactggagtta
ttcatggggaagatgcataagacctgctaccatgtgcaagggggactgatagatacacct
gcagaagatgatccgtctccctgtgccccccagtccgcgcatgggcggcagtgtcagaac
ggcaccgagtgcaaggcaggctgggagggaccgaagcacggcattacgaactttgacaat
tttgcttttgccatgctgacggtgtttcagtgcatcacaatggagggctggacagatgta
ctgtactggatgcaggacgctatgggctatgagttaccatgggtgtattttgtcagtctg
gtcatctttggatcctttttcgttctaaatctggttcttggtgtgttgagcggggagttt
tccaaagaaagagagaaggctaaggctcggggcgatttccagaagttacgggaaaaacaa
cagcttgaggaggatttgaagggatacttagactggataactcaagcagaagatattgac
ccagaaaatgaagacgaaggcatggatgaggagaagcctcgaaacatgagcatgcccacc
agtgagaccgagtccgtgaacacagacaacgtccctggagcagatattgaaggcgaaaac
tgcggtgctaggctagcgcatcggatctcaaaatcaaagtttagtcgctactggcgtcga
tggaatcgattctgcagaagaaagtgccgtgctgctgtcaagtccaatgttttttactgg
ttggtgatctttcttgtgtttctcaacacccttaccattgcctctgaacactacaaccag
ccagactggctcacggaggtccaagacactgccaataaggtgctgctagctcttttcacg
gcagagatgctgctgaagatgtacagccttggtctccaggcctattttgtgtccctcttc
aaccgctttgactgtttcattgtgtgtggaggaatcctggaaacgattctggttgagacg
aagatcatgtcaccactgggcatttcggtgttgagatgtgtccgactcctaagaatattt
aaaatcacaagatactggaactccctgagtaaccttgtggcttcactcctgaattccgtc
cgctccattgcctccctgttgctgcttctctttctcttcattatcatcttctcactcctg
gggatgcagctctttgggggcaagtttaactttgatgagatgcagaccagaaggagtaca
tttgacaacttcccccagtccctcctcactgtgtttcagatcctgactggggaggactgg
aattcggtgatgtatgatgggatcatggcttatggcggcccctcttttccaggaatgttg
gtctgtatttacttcatcatcctcttcatctgtggaaactgtatcctttgatgctactct
tttctccaagtggggctgaataaccttgctgatgctgagagtttaacatctgcacagaaa
gaggaggaagaggaaaaagaaaggaaaaagctagctaggactgctagtcccgaaaagaaa
caggagatagaaaaaacagctgtggaggaggagacaaaggaggagaaaattgagctgaag
tcgatcactgctgatggagaatccccacctgctaccaagatcaacgtggatgattatcag
cccaatgaaaatgaagaaaagagcccatatcccacaacagaagcgccagcagaggaagat
gaggaagaacccgagatgcctgtcggccctcggcctcgcccgatgtctgagctgcacctc
aaggaaaaggctgtgcccatgcctgatgccagtgcttttttcatcttcagtcctaacaac
aggtttcgtgtccactgccatcgaatcgttaacgataatattttcaccaacctgatccta
tttttcatcttgctcagcagtatctccctggcagctgaggaccccgtccgacacctctcc
tttagaaaccaaattatcttttattttgatatagtttttactgtcattttcaccattgaa
attgctctgaagatgaccgcatacggggctttcctccataagggctccttctgcagaaac
tatttcaacatcttagacctgctggtggtcagcgtttctctcatctcctttgggatccag
tccagtgctatcaatgtggtgaagatcctgcgtgttctgcgagtccttagaccactgagg
gccatcaacagagccaaaggactaaagcatgtggtccagtgcgtgtttgtcgccatccga
accattggaaacattgtgattgtcaccactttgctgcagttcatgtttgcctgcattgga
gttcagttgtttaagggcaagctgtacagctgcactgatagctccaagcagacagcagca
gagtgcagagggtactacattacatacaaggatggtgaggtcaaccagcccatgatacaa
ccccggagctgggagaacagcaagtttgactttgacaatgtcttgactgctatgatggca
ctcttcactgtctcaacctttgagggctggccagagttgctgtataggtccattgattcc
cacatggaggatgtgggacccatctataatcacagggttgagatctccatcttctttatt
atctacatcatcatcattgctttcttcatgatgaacatcttcgttggtttcgtcatcgtc
acatttcaggaacaaggagaacaagaatacaagaactgtgagctggacaaaaaccagcgc
cagtgtgtagaatatgccctgaaagcccggcctctgcggagatacatccctaaaaaccag
taccagtacaaagtttggtatgtggtcaactccacctattttgaatacctgatgttcgtt
ctgatcctgctgacctccatctgcctggccatgcaacactacggtcagagctgcatgttc
aaggaagccatgaatatcctcaacatgctcttcactggcctcttcactgttgagatggtc
ctgaaattaatcgccttcaaacccaagggttactttagtgatccttggaatgtttttgac
ttcctcatcgtaattggcagcattatagacgtcattctcagtgaaactaatccagctgaa
catacccaatgctcttcctctatgaacgcagaggaaaactctcgcatctcaatcaccttc
ttccgactcttccgcgtgatgcgtctcgtgaagctcctgagccgaggggagggcatccgg
acgctgctttggaccttcatcaagtctttccaggctctcccctatgtggctcttttaata
gtgatgttgttcttcatctacgccgtgattgggatgcaggtgtttggtaaaattgcgctg
aacgataccacagaaatcaaccgcaacaacaacttccagaccttcccccaggcagtgctg
ctgcttttcaggtgtgccaccggtgaggcctggcaggaaatcatgctggcatgtctccca
gacaagaagtgtgacccagagtcggagccggccaactccaccgaagccgatcactcctgt
ggcagcagcttcgccgtcttctatttcatcagcttctacatgctctgtgccttcctgatc
atcaatctttttgtagctgttataatggataactttgattacctgacacgggactggtcc
attttaggaccacaccacctggatgagtttaaaaggatctgggcagagtatgaccctgaa
gccaagggacggatcaaacacttggacgtggtgacactgctccggcggatccagcccccc
ctgggcttcgggaagctctgccctcaccgggtggcttgcaaacgccttgtctccatgaat
atgccactgaacagtgatgggactgtcatgttcaatgccactctctttgcactggtcaga
acagcgttgaggatcaagacagaaggtaacctggagcaagccaacgaagagctgagagca
ataattaagaaaatctggaagcgcaccagtatgaagctgctggaccaggtggtgcccccc
gcaggtgatgacgaggtgaccgttgggaagttctatgccactttcctgattcaggagtat
ttccggaagttcaagaagcgtaaagaacagggactggtgggcaagccctcccagcgcaac
gcgctctccttgcaggctggtctgcgcacacttcacgacattgggccagagatccgacga
gcaatttctggagacctgacagctgaagaagagctagataaggccatgaaagaagctgtt
tctgctgcctctgaagatgatatcttccggagagctggaggcttgtttggaaaccatgtc
agctattaccaaagtgatggcaggagtgcgttcccccagaccttcaccacccagcgacct
ttgcacatcaataagtctggcaacaaccagggagatactgagtctccatctcatgagaag
ctggtggactccaccttcactcccagcagctactcatcttcaggctccaatgccaacatc
aacaatgccaacaacactgccctgtgccgcttccccagcccacccagctaccccagcact
gtcagcacagtggaaggccatgggacccccttgtcacccaccatatgtgtgcaggaggct
ccttggaaactaccttccaaaagctccagttccagagacagccagctggcaattgtttgc
caagaggaagtgtctcaggatgagacttatgatgaaaatttgaatgaagacattgagtac
tgtagtgaaccaagtctgctctctactgaaatgcttgcataccaagatgatgaaaacaga
caacttactccaccagaaaacaacaaaggagaggacacccggcactctccgaagaaaggg
tttctgtgctcctcagcactaggtcgaagagcatcttttcacttagagtgtctgaaaaga
cagaaaaaccagggcgtagacgtctcacagaagacagttctgcctttgcatctggtacat
catcaggcgttagcggtggccggcctgagtcccctgctccagcgaagccattcccccacc
atgttctctcggctgtgtgctacgccccccgcaacaccctgcagccgtggctggccgcaa
cagaccatcccgactctgcgcctcgacggggcagagtccagcgagaagctcaacagcagc
ttcccgtcagtacactgcggctctcggtacactgacaccaccggctgcagcagcccgagg
agagccagaccggtctccctcaccgtccccagccagagcggagggagcagcaggcagttt
cacggcagcgctggcagcctggtcgaagcggtcttgatttcggaaggactgatgcagttt
gctcaagatccaaagttcattgaggtgacaacccaggagctcgcagacgcctgcgacatg
acgatagaagagatggaaaatgcagcagacaacattctcaatggtaacagcaagcagagc
cccaatggcaacctcttgccttttgttaactgcagggacccagggcaggacagtgcagga
gaggaagaggaagaggtgcagaacccggattgtagaaaaagtcaggaggagctcaaggac
agcaggatttatatcagcagcctgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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