KEGG   Desmodus rotundus (common vampire bat): 112315138
Entry
112315138         CDS       T05907                                 
Symbol
SNRNP200
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
Organism
dro  Desmodus rotundus (common vampire bat)
Pathway
dro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112315138 (SNRNP200)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dro03041]
    112315138 (SNRNP200)
Enzymes [BR:dro01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     112315138 (SNRNP200)
Spliceosome [BR:dro03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    112315138 (SNRNP200)
 Complex C
   U5 SnRNP specific factors
    112315138 (SNRNP200)
SSDB
Motif
Pfam: Sec63 SNRNP200_wHTH DEAD Helicase_PWI ResIII Helicase_C BRR2_plug AAA_22 AAA_30 PhoH SWI2_SNF2 DUF603
Other DBs
NCBI-GeneID: 112315138
NCBI-ProteinID: XP_024427553
UniProt: K9J428
Position
Unknown
AA seq 2136 aa
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT
DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL
SANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFL
YQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFTQGS
HFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKT
LNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIY
IAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKG
GERTYTQLVRLIILDEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYED
VATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDM
LNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTA
ALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSL
SSEFKNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMAD
MVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVV
KKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKV
ELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFFVPVFE
PLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESL
YQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQSSEGRCVYIT
PMEALAEQVYMDWYEKFQDRLSKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWK
QRKNVQNINLFVVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDV
AHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVI
VFVPSRKQTRLTAIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYL
HEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMSVAAHLVIIMDTQYYNGKIHAYVDYP
IYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSK
CISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPI
RHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAI
RLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVE
SVFDIMEMEDEERNALLQLSDSQMADVARFCNRYPNIELSYEVVDKDIIRSGGPVVVLVQ
LEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATG
AHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD
NT seq 6411 nt   +upstreamnt  +downstreamnt
atggcggatgtgaccgcccggagcctgcagtacgagtacaaagcgaactcgaatcttgtc
ctccaagctgaccgttctctcattgaccggacccgccgggatgaacccacaggagaggtg
ttatccctggttgggaagctggagggcacccggatgggcgataaggctcaacggaccaaa
ccacagatgcaggaggaaagaagagccaagcgaagaaagcgtgatgaggatcggcatgac
atcaacaagatgaaggggtacactctgctctcggagggtattgatgagatggtaggcatc
atctataagcccaaaaccaaagagacccgggagacctatgaagtgctgctcagcttcatc
caggctgcccttggggaccagccacgtgatattctttgtggggcagctgatgaagttcta
gcagtcctaaagaatgaaaagcttcgtgacaaggaaaggagaaaggagattgacttgttg
ctagggcagacagatgataccagataccatgtgctagtgaacttgggtaaaaagatcaca
gactacggcggagacaaggaaatccagaatatggatgacaacattgatgagacatatggt
gtgaacgtacagtttgagtctgatgaggaggaaggcgatgaagatgtatatggggaggtt
cgagaagaggcgtctgatgacgacatggaaggggatgaagctgtggtgcgctgcaccctc
tcggctaatcttgtagcctctggtgagctgatgagttctaagaagaaggatttgcaccct
cgggacattgatgcgttctggctacagcggcagctcagtcgcttttacgatgatgccatt
gtgtctcagaagaaggcagatgaagtgttggaaatcttaaagacggccagtgatgatcgg
gagtgtgaaaaccagctggtgctgctccttggtttcaacactttcgattttattaaagtg
ctccggcagcacaggatgatgattttatattgtaccttgctggccagtgcacagagtgaa
gctgaaaaggaaaggatcatgggaaagatggaagctgatccagagctgtcaaagtttctc
taccagctccatgaaacagagaaggaggatctgatccgcgaggagcggtccaggagagag
cgagtgcggcagtcccggatggacacggacctggaaaccatggatctggaccagggcggg
gaggcattggctccaagacaggttctggacttagaggacctggttttcacccaggggagc
cacttcatggccaacaaacgctgtcagcttccagatggatcctttcgtcgccagcgcaag
ggctacgaagaagtgcatgtgcctgcactgaagcccaagccctttggttctgaggaacaa
ctgctcccggtggagaagctgcccaagtatgcacaggctggatttgagggcttcaaaacg
ctgaaccgaatccagagtaagctctaccgggccgccctggagacagatgagaacctgctg
ctgtgtgctcccactggggctggtaaaaccaacgtggccctgatgtgcatgctccgggag
atcgggaagcacattaacatggatggcactatcaacgtggacgacttcaagatcatctac
attgctcccatgcggtccttggtgcaggagatggtgggcagctttggaaagcgcctggct
acatatggcatcactgttgcagaactgactggcgaccaccagctgtgcaaggaggagatc
agcgccactcagatcatcgtctgcactcctgagaagtgggacatcattactcgcaagggt
ggggagcgcacctacacccagctcgtgcggctcatcattctggatgagatccatcttctc
catgatgacagaggccctgtcttagaagctttggtggccagggccatccgaaacattgag
atgacccaagaggatgtaagactcattgggcttagtgccaccctccccaactatgaagat
gtggccacctttctgcgtgttgatcctgccaagggcctcttctactttgacaatagcttc
cgcccagtgcctctggaacagacttatgtaggcatcacagagaagaaagctatcaagcgt
ttccagatcatgaatgagatagtctatgagaagatcatggaacatgcaggaaaaaatcag
gtgttagtgtttgtccactcccggaaggagactgggaagacggccagggccatccgggac
atgtgcctagagaaggacaccctgggtctgtttctgagagagggctctgcctccacagaa
gtccttcggacggaagctgagcagtgcaagaacctggagctgaaggatcttctgccctat
ggctttgccattcatcacgcaggcatgaccagagttgacagaacacttgtagaggatctc
tttgctgataaacacattcaggttttggtttccacagcaactctggcttggggtgtgaat
ctccccgcacatacagtcatcatcaaaggcacccaggtgtatagtccagagaaggggcgc
tggacagaactgggggcactggacattctgcagatgctgggacgtgccggaagaccccag
tatgacaccaagggtgaaggcatactcatcacctctcacggggagcttcagtactacctg
tctctcctcaaccagcagcttcctattgagagccagatggtgtcaaagctgcctgacatg
ctcaacgcggaaatcgtgctgggcaatgtgcagaatgcaaaggatgcggtgaactggctg
ggctatgcctacctgtatatccgaatgctccgatccccaactctgtatggcatctctcac
gatgatctcaagggagacccactgctggaccagcgccgactggatctggttcatactgct
gccttgatgctggacaagaacaatctggtcaagtatgacaagaagacaggcaacttccag
gtgacagaactgggtcgtatagccagccactactacatcaccaatgacacagtgcagacc
tacaaccagctgctgaagcctactctgagcgagattgagcttttcagagtcttctcattg
tcttcagagttcaagaacatcactgtgagagaggaggagaagctggagctgcagaagctg
ctggagagggtgcccatccctgtaaaggagagcatcgaggagcccagtgcgaagatcaat
gtgcttcttcaagccttcatctcacagctgaaattggagggctttgcactgatggccgac
atggtgtatgtcacacagtcggcaggccggttgatgcgggccatctttgaaattgtcctg
aaccggggttgggcacaacttacagataagacgctgaacctctgcaagatgatcgataaa
cgcatgtggcagtccatgtgtccactgcgtcagttccggaaactccccgaggaagtagtg
aagaagattgagaagaaaaacttcccttttgagcgtctgtatgacctgaatcataatgag
ataggggagctcatccgtatgccaaagatgggcaagaccatccacaaatacgtccacctg
ttccccaagttagagctgtctgtgcacctgcagcccatcacacgctccaccctgaaagtg
gagctgaccatcacaccagacttccagtgggatgagaaggtccatggttcatcggaagca
ttctggattctcgtggaggatgtggacagtgaggtgatactgcaccatgagtatttccta
ctcaaggccaagtacgcccaggacgagcacctcattacattctttgtgcctgtctttgaa
ccgctgccacctcagtacttcatccgcgtggtgtctgaccgctggctctcttgtgagacc
cagctccctgtctccttccgacacctgatcctgccagagaagtacccacctcccactgaa
cttctggacctgcagcccttgcctgtgtctgccttgagaaacagcgcctttgagagcctt
taccaagataaatttcctttctttaaccccatccagacccaagtgtttaacacggtgtac
aacagtgacgacaacgtgtttgtgggggcgcccactggcagcgggaagaccatctgtgca
gagtttgccatcctgcgcatgttgctgcagagctcggaggggcgctgtgtctacatcacc
cccatggaggcgctggcagagcaggtgtacatggactggtatgagaagttccaggacagg
ctcagcaagaaggtagtgctcctgacaggcgagaccagcacggacctaaagctcctgggc
aaaggcaacatcatcatcagtacccccgagaagtgggacatcctttctcggcgctggaag
cagcgcaagaacgttcagaacatcaacctcttcgtggtggatgaggtccacctcattggg
ggcgagaatgggcctgttttggaagtgatctgctcccggatgcgctatatctcctctcag
attgagcgacccattcgtattgtggcacttagctcctcactctcgaatgctaaggatgtg
gcccactggctggggtgcagtgccacctccactttcaacttccacccgaatgtgcgccct
gtgcctttggagctgcacatccagggcttcaacatcagtcacacacagactcgtctgctg
tccatggccaagcctgtgtaccatgctatcaccaagcactctcccaagaagcctgtcatt
gtttttgtgccatctcgcaagcagacccgcctcactgcgattgacatcctcaccacgtgt
gcagccgacatccagcggcagaggttcttacattgcactgagaaggatctgatcccatac
ctggagaagctgagtgacagcacactcaaggaaacactgttaaatggggtaggctacctg
cacgaggggctcagccccatggagcgacgcctggtggaacagctcttcagctcaggggcc
atccaggtggtggtagcttctcggagtctctgctggggtatgagcgtggccgcccacctg
gtgatcatcatggacacccagtattacaatggcaagatccacgcgtatgtggactatccc
atctatgacgtgcttcagatggtggggcatgccaaccgacctctgcaggatgacgagggg
cgttgcgtcatcatgtgccagggctccaaaaaggatttctttaagaagtttttgtacgag
ccgttgccagtagagtctcacctggaccactgcatgcatgaccacttcaatgctgagatt
gtcaccaagaccattgagaataaacaggatgctgtggactacctcacctggacttttctg
taccgccgcatgacacagaaccccaactactacaatttgcagggcatctcccaccgtcac
ctgtctgaccacttgtcggagttggtggagcagaccctgagtgacttggagcagtccaag
tgtatcagcatagaggacgagatggacgtggcgcctctgaacctgggcatgattgccgcc
tactattatatcaactacaccaccattgagctcttcagcatgtccctgaatgccaaaact
aaggtgcgggggctcatcgagatcatctccaacgcggccgagtatgagaatatacccatc
cggcaccatgaggacaacctcctgcggcaattggctcagaaggtccctcacaagctgaac
aaccctaagttcaacgacccacacgtcaagactaacctgctcctgcaggctcacctgtcc
cgaatgcagctgagtgctgagctgcagtcagatacagaggagatccttagcaaggcgatc
cggctcatccaggcctgtgtggatgtcctctccagcaatgggtggctaagtcctgctctg
gcagccatggaactggcccagatggtcacccaggccatgtggtccaaggactcctacctg
aaacagctgccacacttcacgtcagagcacatcaaacgttgcacagacaagggagtggag
agtgtttttgatatcatggagatggaggatgaagagcgaaatgcactgcttcagctgtct
gacagccagatggcagatgtggcccggttctgtaaccgctaccctaatatcgagctgtct
tacgaagtggtggacaaggacatcattcgcagtggcgggcccgttgtggtgctggtacag
ctggagcgggaggaggaagtcacgggtcctgtgatagcccctctcttcccacagaaacgt
gaagagggctggtgggtggtgatcggagatgccaagtccaacagtctcatctctatcaag
aggctgaccctgcagcagaaggccaaggtgaagcttgacttcgtggccccggccactggc
gcccacaactacactctgtacttcatgagtgatgcttatatgggatgtgaccaggaatac
aaattcagtgtggatgtgaaagaagccgagacagacagtgactcggattga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system