KEGG   Eleginops maclovinus (Patagonian blennie): 134875919
Entry
134875919         CDS       T09869                                 
Symbol
col4a6
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain
  KO
K06237  collagen type IV alpha
Organism
emac  Eleginops maclovinus (Patagonian blennie)
Pathway
emac04382  Cornified envelope formation
emac04510  Focal adhesion
emac04512  ECM-receptor interaction
emac04518  Integrin signaling
emac04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:emac00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    134875919 (col4a6)
   04518 Integrin signaling
    134875919 (col4a6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    134875919 (col4a6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    134875919 (col4a6)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    134875919 (col4a6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:emac04147]
    134875919 (col4a6)
   00536 Glycosaminoglycan binding proteins [BR:emac00536]
    134875919 (col4a6)
Exosome [BR:emac04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   134875919 (col4a6)
Glycosaminoglycan binding proteins [BR:emac00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   134875919 (col4a6)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 134875919
NCBI-ProteinID: XP_063756729
Position
14:complement(2447258..2546534)
AA seq 1712 aa
MKLLICMIAVALAVRSAHGGNQLDEPCAGRNCGEGCRCNPEKGSRGRPGPLGEVGSSGPE
GPRGGTGPTGPKGEKGHNGLKGPSGQKGDKGPMGVPGFTGTDGVPGHPGLDGGRGPSGLD
GCNGTRGEPGDPGYGIGAPGPAGLAGPFGPKGQKGEPRYISDDGFPNVPGYPGPNGQPGI
RGPGGPTGYPGPMGPEGYSGPPGPPGPPGPMGSRSDGYEGEKGDKGDVGLPGPSGTPGDG
SLRSEQTLTIYKGDKGSPGPKGIRGFPGTPGRAGSFGYRGEPGEKGIPGYPGARGAPGLN
GPPGRPGQQGFRGTPGFIGQPGYTGGKGDQGEPGAPGPPAYVSGLGATVQGLAGDPGLNG
LPGAPGDPGPQGYPGPPGPPGTIDFRTGDGSPGFPGTPGPKGEKGNPGIPGYGTEGLPGS
SGLPGSPGPAGLQGPSSSIEPCVIYPEVSTRPKGDGVVVPSRVPGQPGLPGSRGLPGNKG
YNGYQGDPGDCACIGGGTSGLPGLQGPPGPNGNPGFPGRKGELGDGGGPGYDGRQGPPGR
PGEPGNYGRKGQKGTSFYPSLGLGVKGELGATGPRGPNGETGKPGRDALPGFPGAPGPPG
DGGYGTVGEKGYPGYPGSKGRPGEPGEPGVGYVGTPGFRGDAGDPGIPGFPGPPGLPGPR
GEYSCAGVNDDGEGTGTVLPCTIPGEMGDPGYPGVPGRPGVKGQPGFPGGPGRPGFDGAK
GDRGDPGFGGQPGPQGFPGPRGDPGFPGGPGQSYDGAKGKDGVPGRPGGKGQPGEVLGAT
PGSPGQNGIPGTSGDKGQPGTPGGSGLPGGDGRYGVPGLKGERGVDGYPGSTGLPGLPGE
PFFGIPGRPGSLGAVGLSGSPGFPGRKGERGDPGFPGPAGMKGTPGLPGTPGSPGLRGPS
GPPGPGTRDGIPGIPGRKGETGFPGLMGFPGLPGRPGSPGFPGGKGQPGGPGRDGLNGGP
GYSGQKGDRGYPGPPGLPSLPFGSDIIVKGEPGNNGRNGSPGFPGPRGDKGLPGLPGRQG
LPGLPGYAEQSKGQPGLPGYPGQPGTPGYPGSKGEGGIMGFPGMSGPRGDDGTAGFPGNP
GENGRPGGKGAPGESYGYPGGAGAKGQPGDSGYPGGPGNSGAPGDNGFPGGPGYPGSKGG
PGDGGRPGIMGSPGFPGPKGQSGYPGRPGQDGSPGSPAGPGGPGAKGLSGSPGLDGLNGL
AGPKGLPGTPGGNAGGRQGTAGIPGLKGERGXSYPGGPGYSGAKGERGDQGGPGRPGFPG
LPGPPGPTVGSDVPGPTGDPGLPGLDGEYGFQGPPGPPGPPGPGTAQGDRGDSGLPGFPG
SPGRKGESGLPGGAGLLGNPGFKGGRGESGYSGGPGLKGYPGDSGYYGNKGAKGLQGRPG
RKGVPGVTIPSIPRDFARPLGEIGYPGSSGGSGTPGEPGQPGLPGRSGPKGRPGPGGKLG
RTGSPGFPGPIGDAGPPGFPGPTGEQGAPGSSGRSGPPGSVGRGSSIGYTLVKHSQNAQV
PMCPQGMAKLWDGYSLLFVEGQEKAHNQDLGQAGSCLPRFSTIPFLYCSPNEVCYYASRN
DKSYWLSTTAPIPMMPVAEQQIQPYVSRCAVCEAPSLAVAVHSQDLTIPTCPPGWRSLWI
GYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGAKGSCHYFANKYSFWLTTVQP
DQEFVYSPGQETLKGGQERSRVSRCQVCSKLL
NT seq 5139 nt   +upstreamnt  +downstreamnt
atgaaactcctgatttgtatgatagcagtcgccttggcggtgagatctgcgcacggaggc
aaccaacttgacgagccgtgtgccggacgcaactgtggcgaaggatgccggtgcaacccg
gagaaaggcagcaggggtcgtccagggcctctcggagaagtcggttcaagcggacctgag
ggtcctcgtgggggcacggggcctacagggccgaaaggagagaagggtcacaatggactg
aaaggaccgtccggccagaaaggagacaaggggccaatgggagtgcctgggttcactgga
actgatggagtacctggtcaccctggtctggacgggggccgaggaccctccggattggac
ggatgtaacgggacgagaggagaacccggcgatcctggttatggaatcggagcaccagga
cccgctggactcgctgggccgtttgggccgaagggtcagaaaggagagcctcgatacatc
tcggacgacggtttcccaaatgtaccaggttatccaggaccgaacggacaacctggaatc
agaggtcctggtggtccgactggttatcccggtccaatggggccagagggatattctggc
ccacctggtcctcccggtcccccggggccgatggggagccgcagtgacggatatgaaggg
gagaaaggagacaagggcgacgtgggtcttcccggacccagcggtactccgggcgacggc
tcgctaagaagcgaacaaactctcactatctacaaaggagataagggttcacccggtcca
aagggaataagaggatttcctggaactcctggccgagctggatcttttggctatagaggg
gaacccggagagaagggaattcctggataccccggtgcaagaggtgcgcctggtttgaac
gggcctcccggacgtcccggacaacagggatttagaggtactccaggttttatcgggcaa
cctggatacaccggcggaaagggagatcagggagaacccggagcaccaggacccccggcc
tacgttagcggtctgggcgctactgttcaaggactggcaggtgacccgggtctcaacggg
ctgcccggtgcccccggtgacccagggcctcaaggatacccaggaccaccaggaccacca
ggaactattgattttaggacaggtgacggatccccaggttttccaggaacccccggccca
aagggagagaagggaaacccgggaataccaggctatggcactgaaggtctccccggatcc
tctggcctccccggatcccccggccccgccggtcttcagggtccttctagctccattgaa
ccctgcgtcatctaccctgaggtgtccacgaggcccaaaggtgatggggtagttgtgccc
agcagagtccctggccagcctggattgcccggctctagaggtctgcccggcaacaaggga
tacaatggctaccaaggtgatcccggagactgtgcctgcatcgggggcggcacctcaggg
ttgcctgggttgcagggaccccccggccccaacggcaaccccggtttccccggacgaaag
ggcgaacttggagacggcggtgggcctggctatgatggccgtcagggacctcctggtcgt
cctggtgaacctgggaactatggtcgtaaagggcagaagggaacgtccttctaccctagc
cttggtttgggggtgaaaggagagctcggagcaactggaccccgcggacctaacggtgaa
actggaaaacccggtagagacgcacttcctggattccctggagcgcctggaccccccggt
gatggtggatacggcacagtcggagagaaaggatacccaggatacccggggtctaagggt
cgtcccggagaaccaggcgagcccggcgtcggatacgtcggcacgcccggcttccgtgga
gatgctggagacccgggaataccgggtttcccaggaccaccaggtttacccggaccacga
ggtgaatacagctgtgcaggggttaatgacgacggagagggaacgggcacagtgctaccg
tgcaccatacctggtgagatgggagaccccggataccccggtgtacccggacgaccaggc
gtcaaaggtcagccaggtttcccaggaggccccggacgtcccggcttcgacggggccaaa
ggagacagaggagaccccggttttggaggacaacctggaccacaaggtttccccggaccc
agaggagatcccggatttcccggaggtccaggacagagttatgacggcgccaaggggaag
gatggtgttcctgggcgtcccggaggcaagggccagcctggagaggtactgggggccaca
cctggttccccaggacagaacggaatacctggaacctctggagacaagggccagcccggg
acccctggagggtctggattacctggtggggacggacgttacggtgttcccggtctgaag
ggagagcgcggagtggacggttatcctggttccaccggccttcccggacttccaggcgaa
ccgttttttggtattcccggtcgccctggatctctcggtgccgtcggattgagcggatcc
ccaggtttccccggtagaaagggggaaagaggagacccgggtttcccaggacccgctggg
atgaagggaacccccggcctgcccggcacccctggatccccagggctaagaggaccctct
gggcccccaggaccaggaactagagacggaataccaggaataccaggacggaagggtgag
acaggtttcccaggactgatgggcttccctggactcccaggacgtcctggatcacccggg
tttcctggaggcaaaggacagcctggaggaccgggtagagacgggctgaatggcggcccc
ggatactccggacagaaaggtgaccgaggataccccggcccccccggtctgccctccctt
ccgttcggatcagatattatagtgaaaggagaaccaggaaacaacggaagaaatggcagt
cctggtttccccggccccagaggtgacaagggtctccccggtctgcctggtcgtcagggt
cttcccggtcttcctggttacgccgagcagagcaaaggacagccaggactacctggttac
cctgggcaaccaggaactccaggctacccgggatctaagggagaaggtggcattatggga
ttccccggcatgtctggaccacggggggatgacggtacagctggtttccctggcaaccct
ggagaaaacggacgaccaggaggcaaaggtgctcccggagagagctacggttatcctgga
ggagcaggagctaaaggccagcccggagattcaggctacccaggcggtcccgggaatagc
ggcgctcccggtgacaacggcttcccaggaggtccaggctaccccggatcaaagggaggt
cctggtgacggaggccggcctggaataatgggctcccctggtttccccgggccaaagggc
cagtctggatacccaggaagaccaggacaagacgggtctcctggttcccctgcaggccct
ggaggtcccggagccaaaggtttatctggatcacctggtttggacggacttaatgggctt
gctggacctaagggcctcccaggaacaccaggtgggaatgctggaggtcgtcaaggaacc
gccggtattccaggtttgaagggcgagaggggcntctcctatcccgggggtccaggatac
tccggagcgaagggagagagaggagaccaaggaggtccgggacgcccagggttcccaggt
ctgcccggaccccctggtcccactgtggggtcggatgttcccggacctactggagaccca
ggactccctggactggatggagaatatggtttccagggtcctccaggtcctcccgggcct
cctggtcccggcacagctcagggagatagaggtgactctgggctcccaggtttcccagga
tcccccggcaggaagggagaatccggcctccctggtggtgccggactcctcggcaacccc
gggttcaaaggaggaagaggcgagagcggctacagcggaggtccaggtcttaagggctat
cctggggactctggttattatggaaacaaaggagccaagggactacaaggacgtcccggt
cgtaagggagtccccggagtcaccattccaagtataccgcgagacttcgcgcgacccctc
ggagagataggttaccccggatcaagtggaggctccggtactcccggagaacccggtcag
ccgggactccccggacgctcaggtcctaagggtcgtcccggtcctggaggcaaactgggc
cggactggatctcctggcttccccggacccatcggtgacgccggaccccccggtttccct
ggacccactggagaacaaggggcccctggatcatcggggcgctccgggccccccgggtcc
gtgggtcgcggctccagcattggttacaccctggtgaagcacagccagaacgcccaggtg
cccatgtgtcctcagggcatggccaagctgtgggacgggtacagcctgctgttcgtggag
ggacaggagaaggctcacaaccaggacctgggtcaggcggggtcgtgcctccccaggttt
agcaccatccccttcctctactgctcccccaatgaggtgtgctactacgccagccgcaat
gacaagtcctactggctctccaccactgctcccattcccatgatgcccgtggccgagcag
cagatccagccctacgtcagcaggtgtgctgtgtgtgaggctccctctctggctgtagct
gtgcacagtcaggacctgaccatccccacctgcccccccggctggaggagtctctggatc
ggatactccttcctcatgcacacagcggcgggcgctgagggtggggggcagtccctggtt
tcccccggctcctgcctggaggacttccgcgccacgccgttcatcgagtgcaacggggcc
aagggctcctgccactacttcgccaacaagtacagcttctggctcaccaccgtgcagccg
gaccaggagttcgtctactcccccggccaggagaccctgaaggggggccaggagcgctcc
agagtcagccgctgccaagtctgcagcaagctgttgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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