KEGG   Echinops telfairi (small Madagascar hedgehog): 101654357
Entry
101654357         CDS       T08707                                 
Symbol
PSMC1
Name
(RefSeq) 26S proteasome regulatory subunit 4
  KO
K03062  26S proteasome regulatory subunit T2
Organism
etf  Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03050  Proteasome
etf05010  Alzheimer disease
etf05012  Parkinson disease
etf05014  Amyotrophic lateral sclerosis
etf05016  Huntington disease
etf05017  Spinocerebellar ataxia
etf05020  Prion disease
etf05022  Pathways of neurodegeneration - multiple diseases
etf05165  Human papillomavirus infection
etf05169  Epstein-Barr virus infection
etf05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:etf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    101654357 (PSMC1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    101654357 (PSMC1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    101654357 (PSMC1)
   05165 Human papillomavirus infection
    101654357 (PSMC1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    101654357 (PSMC1)
   05012 Parkinson disease
    101654357 (PSMC1)
   05014 Amyotrophic lateral sclerosis
    101654357 (PSMC1)
   05016 Huntington disease
    101654357 (PSMC1)
   05017 Spinocerebellar ataxia
    101654357 (PSMC1)
   05020 Prion disease
    101654357 (PSMC1)
   05022 Pathways of neurodegeneration - multiple diseases
    101654357 (PSMC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:etf03051]
    101654357 (PSMC1)
Proteasome [BR:etf03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     101654357 (PSMC1)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_22 AAA_2 nSTAND3 DUF815 AAA_5 RuvB_N AAA_16 AAA_28 AAA_3 AAA_25 AAA_14 ATPase RNA_helicase IstB_IS21 TIP49 NPHP3_N Mg_chelatase AAA_11 AAA_33 NACHT AAA_7 Parvo_NS1 ABC_tran PhoH AAA_24 Prot_ATP_ID_OB_N NB-ARC AAA_18 AAA_30 TsaE Sigma54_activat
Other DBs
NCBI-GeneID: 101654357
NCBI-ProteinID: XP_004698814
Position
Unknown
AA seq 367 aa
MEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYV
SILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQ
IQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGS
ELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELL
NQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT
LAEDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEG
TPEGLYL
NT seq 1104 nt   +upstreamnt  +downstreamnt
atggaggaagagttcatcaggaaccaggagcagatgaagcccctcgaagaaaagcaagag
gaggagaggtcaaaggtggacgacctgagggggaccccgatgtcggtggggactttggaa
gagatcattgatgacaaccacgccatcgtgtcgacgtcggtgggctcggagcactacgtc
agcattctgtccttcgtagacaaggacctgctggagccgggctgctcggtcctgctcaac
cacaaggtgcatgcggtgatcggggtgctgatggatgacaccgaccctctggtcacagtg
atgaaggtggaaaaggccccccaggagacctatgctgacattggggggctggacaaccaa
attcaggaaattaaggagtctgtggagcttcctcttactcatcccgagtactatgaagag
atggggatcaagccgcctaagggggtcatcctctacggcccccctggcacaggtaaaacc
ttactagccaaagcagttgcaaaccaaacctcggccacgttcttgcgagtggtgggctca
gagctcattcagaagtacctgggcgacgggcccaagctcgtgcgggagctcttccgagtt
gccgaggagcacgctccgtccatcgtcttcatcgacgagatcgacgccatcgggacaaag
agatacgactccaattcgggcggcgagagagagatccagcggacgatgctggagctcctg
aaccagctggacgggtttgattccaggggcgacgtgaaagtgatcatggccaccaaccgg
atagaaaccttagacccagcccttatccggccaggccgcattgaccggaagattgagttc
cccctgcctgatgagaagaccaagaagcgcatctttcagattcacacaagccggatgacg
ctggccgaggacgtcaccttggacgacctgatcatggctaaagacgacctctctggcgct
gacatcaaggctatctgcaccgaagcaggcctcatggctctgcgggagcgcaggatgaag
gtcacaaacgaagacttcaagaagtccaaggaaaacgtgctctataagaaacaagaaggc
acccccgaggggctctatctctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (34)   
   Pfam (34)   
All databases (38)   

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