KEGG   Francisella sp. MA067296: BBG19_0519
Entry
BBG19_0519        CDS       T05204                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
frm  Francisella sp. MA067296
Pathway
frm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:frm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BBG19_0519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:frm03019]
    BBG19_0519
   03016 Transfer RNA biogenesis [BR:frm03016]
    BBG19_0519
Enzymes [BR:frm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     BBG19_0519
Messenger RNA biogenesis [BR:frm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BBG19_0519
Transfer RNA biogenesis [BR:frm03016]
 Prokaryotic type
  tRNA degradation factors
   BBG19_0519
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase KH_1 S1 S1_RRP5 KH_2 KH-I_KHDC4-BBP RecX_HTH2
Other DBs
NCBI-ProteinID: APC91255
Position
539819..541900
AA seq 693 aa
MKIYREVFELGNKEIVLETGGMARQADGSVTVSCGNNIVLVTTVVKKSVADGADFFPLSV
HYLEKTYAAGKIPGGFLRREGRPSEEQILISRLIDRSIRPSFPDGFFNEIQIVATVLSYD
GAFSPDMLALIGASASLAISGAPYDDVIAGVRVGYTNGKYILNPNKQDLKDSDLDLVVSG
TDDAILMVESEANSLPESVMLGGILYAHKHLKTIINSISRLAKVASKPRMEYSIYQINKF
LKSQIKSQFFGEIKNAYTIASKQERNLKLNAIRKNVLEYIFSSDVDGNEYSDKEILETFH
DIEKDLVRSDILEGKPRIDGRCTETIRPINVKIGVLPGVHGSALFTRGETQALVVTTLGS
DRDAQLVESLDGIEKCRYMLHYNFPPYSVGECGMVGMAPKRREIGHANLAKRATQAVFPN
EEAYPYVVRVVSEILESNGSSSMATVCGSSLSMMDAGVPIAEPVAGIAMGLIKDGAKYAV
LSDILGDEDHLGDMDFKVAGTRYGVTALQMDIKIKGISREILEQALEQARVGRLHILGIM
NEIIKEHKEAVSDVAPQIHVMNINPAKIKDVVGRGGSTVKGIIEKTGAQIDTSDSGEVKI
FAKDKKSMDMAIAMIEEIVAEVEEGQIYKGKIVKLLDSGAFVNLLGNQDGYLPFSEIEQA
GMKTNSLIEGQGLEVLVQNIDRGGRVKLSLVMR
NT seq 2082 nt   +upstreamnt  +downstreamnt
gtgaaaatatatagagaagtctttgaactaggtaacaaagaaatagttcttgaaacaggt
ggtatggcacgtcaagcagatgggtcagtgactgtaagttgtgggaataatattgtatta
gtaactacagtggttaaaaaatcagtagctgatggtgctgatttttttcctttatcggta
cattatttagagaaaacttacgctgctggcaaaatacctggcggtttcttaagaagagaa
ggtagaccttccgaagaacagattcttatttctaggttaatagatagatctataagacca
tcattcccagatggattttttaatgagattcaaatcgttgccacagttttatcttatgat
ggtgccttttcacctgatatgttagctttgataggtgcttcggcctctttagcaatatct
ggagcaccttacgatgatgttattgctggtgtaagggtaggttatacaaatggtaaatac
attcttaacccaaataagcaggatttgaaagattcagacttggatctagtcgtgtctgga
actgatgatgctattttgatggttgagtctgaggctaatagtctgccagagtctgttatg
cttggtggaattttatatgctcacaagcatctaaaaactattattaactctattagtaga
cttgccaaagtagcatctaagcctcgtatggaatactctatatatcaaattaacaagttt
cttaaatcacaaattaagtcacaattttttggtgaaattaagaacgcttatactatagca
tcaaagcaagaaagaaatctaaaacttaacgcaattagaaagaatgttctagagtatatt
ttctctagtgatgttgatggtaatgaatatagtgacaaagaaattctagagactttccat
gatattgaaaaagaccttgtgagatcagatatccttgaaggtaagccaagaatagatggt
agatgtactgagactattcgacctattaatgtcaaaataggtgttttacccggcgtacat
ggctctgctttgtttacgcgtggtgaaacacaagctttagttgtaaccactctaggtagt
gatagagatgcacagcttgtagaatctttggatggtatagagaaatgtcgttatatgttg
cattataactttccgccatattctgtaggagaatgtggtatggttggtatggctccaaag
cgtcgtgagattggtcatgctaacttagctaagcgtgcaactcaggcagtatttcctaac
gaagaagcatacccttatgttgttagggttgtctctgaaattttagagtcaaatggttca
agctctatggcgacggtatgtggttcttctttatcaatgatggatgctggtgtgccaatt
gctgagccagtagcaggtattgctatgggacttatcaaagatggcgctaaatacgcagta
ttatcagatattttaggtgatgaagatcacctaggtgatatggattttaaggttgctggt
actagatatggtgttacagcattacagatggatatcaagattaaaggtatctcgagagaa
attcttgagcaagcactagagcaggcaagggttggtagattacacattctaggaatcatg
aatgagataataaaagaacataaagaagctgtatctgatgttgctccacaaattcatgtg
atgaacattaatcctgctaagattaaagatgttgttggccgtggtggttctactgtaaaa
ggtataatcgaaaagactggtgcacaaatcgatactagtgactcaggtgaagttaagata
tttgctaaagacaaaaaatctatggatatggctatagcaatgatagaagaaatcgtcgca
gaagttgaggaaggacaaatttataaaggcaaaatagttaagcttttagattctggagct
tttgtaaacttgcttggtaatcaagatggttacttacctttctctgaaattgaacaggct
ggtatgaaaactaactctctaatcgaaggtcaaggtctagaagtcttggtacagaatatt
gatagagggggtagagttaaactttctcttgtaatgaggtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (11)   

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