KEGG   Halotia branconii: QI031_17330
Entry
QI031_17330       CDS       T09011                                 
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
hbq  Halotia branconii
Pathway
hbq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hbq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QI031_17330 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hbq03019]
    QI031_17330 (recQ)
   03400 DNA repair and recombination proteins [BR:hbq03400]
    QI031_17330 (recQ)
Enzymes [BR:hbq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QI031_17330 (recQ)
Messenger RNA biogenesis [BR:hbq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     QI031_17330 (recQ)
DNA repair and recombination proteins [BR:hbq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      QI031_17330 (recQ)
SSDB
Motif
Pfam: RQC HTH_40 DEAD HRDC Helicase_C RecQ_Zn_bind ResIII HTH_IclR GerE HTH_24 HTH_38 MarR HTH_11 HTH_5 HTH_29 Sigma70_r4_2 TnsD Helicase_Sgs1 HTH_23 HTH_7 MarR_2
Other DBs
NCBI-ProteinID: WGV23577
UniProt: A0AAJ6P7H0
Position
complement(3954439..3956598)
AA seq 719 aa
MLQYPHLEQALKYNFGYDQFRPGQRQIIEDALQNRDLLVVMPTGGGKSLCFQLPALIKKG
LTVVVSPLIALMQDQVEALRNNNISATFLNSSLNAYQVRSREEAILKGKVKLVYVAPERL
LSERFLPFLDLVNHEIGISTFAIDEAHCVSEWGHDFRPEYRQLKSLRKRYPNVPTIALTA
TATDRVRGDIIQQLGLKQPSIHIASFNRQNLYYEVRSKTKYAYTELLELIREIDGSAIIY
CLTRKKVDELTFKLQNDQISALSYHAGLTDAERSTNQTRFIRDDVRVMVATIAFGMGINK
PDVRLVVHFDLPRNLESYYQESGRAGRDSEPSRCTLFFSFSDIKTIEWSINQKTDPQEQL
IAKQQLRQVIDYAEGTDCRRTIQLGYFGERFSGNCGNCDNCRHPKPMQDWTIEAMKFLSC
VARCKERFGMLHIIDVLRGAKNQKVTQYEHDKLSTYGIGKDRGLDEWRMLGRSLLHQGLL
EQTNDGYSVLKLNALSWEVMKRQRTVAIAVPIAQKITWEEGSEKAVAAEVLLQNLRSLRK
QLADQQSVPPYVVFPDSTLKLMAQVQPQTLTEFAKLSGVGSHKLAQYGKKFLAEIKAYRQ
EQGIPEQSDSDTAFKNLPTDTELTTLKLHQQGLNIAEIAQKRNLSPSTVFNHLAKLIEKN
QPVDFNQLIPLEHQQKIWQVLEVLGDISLTPIKEQLGESYTFDEIRLMREKWRRESRKS
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgcttcagtatcctcatctcgaacaagcgctaaaatataacttcggttacgatcaattc
cgccctggacaacgacaaattatcgaagatgcgctgcaaaatcgagatttactggttgta
atgcctacgggtggaggaaagtctctgtgttttcaattaccagcactaatcaaaaaaggt
ttaacggtggtggtgtcgccactaattgctttaatgcaagaccaagtggaagcgctgcga
aataataatattagcgccacatttctcaatagcagtctgaatgcttatcaagtgcgatcg
cgtgaagaagctattcttaaaggtaaagttaaattagtctacgtcgccccagaacgtctt
ttaagtgaaagatttttgccatttttagatttagtaaatcacgaaattggtatttctacc
tttgcgattgacgaagcacactgtgtttccgaatgggggcatgactttcgcccagaatat
cgccagttaaaatcattacggaaacgctatcctaatgttcctactatcgccctcacagcc
acagcaacagatcgtgtccgtggtgatattatccaacaattaggattaaagcaacctagt
atccacattgccagcttcaaccgccaaaacttatattacgaagttcgttctaaaactaaa
tatgcttatactgaactattagaattaattagagaaattgatggttcggcaattatttat
tgcttaactcgtaaaaaggttgatgaactcacctttaaactacaaaatgatcagatttcg
gctttgtcttatcatgccggattaactgatgcagaacgttccacaaatcaaactcgattt
attcgagatgatgtccgcgtgatggtggcaacaattgccttcgggatgggaattaataaa
cctgatgtgcggttagttgttcactttgatttaccacgtaatttagaaagttattatcaa
gaatctgggagggcaggaagagatagcgaaccctcacgttgtacattattttttagtttt
agtgatattaaaactattgaatggagtattaatcaaaaaactgatcctcaagaacaattg
attgctaaacaacaactacggcaggtaattgattatgctgaaggtacagattgccgccgt
acaattcaattaggttattttggcgaacgtttttcgggtaattgtggcaactgtgataat
tgccgtcatcccaaacccatgcaagattggacaattgaagccatgaagtttttatcttgt
gtggcgcgttgtaaagaaagatttgggatgttgcacattattgatgtgttgcggggtgca
aaaaaccagaaagttactcaatacgaacacgataaactttctacctacggtattggtaaa
gatagaggtttagatgagtggcgaatgctggggcgatcgcttttgcaccaaggtctgcta
gaacaaactaatgatggttactctgttttgaaactgaacgccttaagttgggaagtcatg
aagcgtcagcgtacagtggcaattgcggttcccatcgcccaaaaaattacttgggaagaa
ggaagtgaaaaagctgttgccgcagaagtattattgcaaaatttgcgatcgctccgcaaa
caactagctgatcaacaatctgtaccaccgtatgttgtctttcccgattcgacgctgaaa
ctcatggcgcaagtacaacctcaaactttaactgagtttgctaaactttctggcgtaggt
agtcataaacttgctcagtatggtaaaaagttcctggcagaaatcaaagcctatcgccaa
gaacaaggcataccagaacaatcagatagtgatacagcctttaaaaatttacctactgac
accgaattgacaaccttaaaattgcatcaacaaggtttgaatattgccgaaattgcccaa
aaacgcaatctcagcccctcgacagtttttaatcacctcgcaaaattaattgagaaaaat
caacctgtagattttaatcagttaataccattagaacatcaacaaaaaatttggcaagtt
ttagaagtgcttggtgatatttcattgactccaattaaagaacaactgggtgaaagctac
acctttgatgaaattcgcctgatgcgggaaaagtggcggcgtgaaagtcgtaaatcttaa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (23)   

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