KEGG   Halichoeres trimaculatus (threespot wrasse): 141800073
Entry
141800073         CDS       T11192                                 
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
htc  Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:htc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    141800073 (mbd4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:htc03036]
    141800073 (mbd4)
   03400 DNA repair and recombination proteins [BR:htc03400]
    141800073 (mbd4)
Chromosome and associated proteins [BR:htc03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    141800073 (mbd4)
DNA repair and recombination proteins [BR:htc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     141800073 (mbd4)
SSDB
Motif
Pfam: MBD HhH-GPD
Other DBs
NCBI-GeneID: 141800073
NCBI-ProteinID: XP_074538635
Position
Unknown
AA seq 510 aa
MAERSDLLDTDLKPVTLNDDFSTSASATVSAKPRNSSTPLEMYPSSCDVQLQTDGDINNQ
SRKDMDDSYHTSTMPPGWIREVRERKAGKTAGKLDVYITSPQGLKFRSKASLHSFLLKNG
EQNIDINLFDFSVINDGGVITSSQGKQRRKKKKHADGEQGKTNNAIERHGPPPSKSKRAL
SLIRDAEEEKVKKERDTNDVKRVYEHITKCSDRTDDSDKCSGPAAHVTTEHDLKLPNSPP
SSGSLRAKLLRLAPSSSQQNYLFTHKDTHRDSQPSIPTLNVEPATESENEGDDEQGKEEI
QIHSKGDNKPNPEPEVLLPDISGESCAEVRESQNKSKSVEDKRKTSPYFSRKPLRDGLSP
PRRKAFKKWTPPRSPYNLVQETLFHNPWKLLVATIFLNKTSGKMAIPVLWQFFERYPSAE
VTREADWKPMSELLKPLGLYELRAKTLVRFSDEYLTKQWRYPIELHGIGKYGNDSYRIFC
VEEWRQVTPDDHMLNKYHAWLWENHDKLEI
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggctgaaagaagtgatttactggacactgatctgaagcccgtcaccctcaacgatgac
ttctccacttctgcatccgcaactgtatctgccaagcccagaaacagcagcacacctctt
gaaatgtatccatctagctgtgacgtccagctccagacagatggtgacataaataaccag
agtcgcaaggacatggatgattcataccacacttccacaatgccccctggctggatcaga
gaggtgagagaaagaaaagcagggaagacagcagggaagctagacgtctacattacaagt
ccccaagggttaaagttccggtcaaaagcatccctgcactcttttctgctaaaaaatgga
gaacaaaatatcgacataaacctttttgatttctctgtaatcaatgatggaggtgtcatc
acttcttcccaagggaaacagagaagaaaaaagaaaaagcatgctgatggagagcagggc
aaaacaaacaatgcaatagaaagacatggtccacctccaagtaaatctaagagagccctt
tccctgatcagagatgctgaagaagaaaaagtaaagaaagaaagggatactaatgatgtc
aaaagagtatatgaacatattacaaaatgcagtgacagaactgatgacagcgataagtgc
tctggaccagccgcacatgtaactacggagcatgatttgaaactgccgaacagccctcca
tcttctggttcactgagggcgaagcttctcaggttggctccttccagcagccaacaaaac
tatctcttcactcacaaggacacccacagagactctcagccttcaatcccaactctgaat
gttgaacctgccactgagagcgagaacgagggtgatgatgaacaaggaaaagaggagata
cagattcacagcaaaggtgacaacaagcccaatcctgaaccggaggtgttattacctgac
atcagtggtgagagctgcgcagaagtgagagaatcccagaataagtccaagagtgtggaa
gacaaacggaaaaccagcccttatttcagcaggaaacccctcagagatggccttagccca
cccaggaggaaggcctttaaaaagtggaccccccctcgctctccctacaacctcgttcag
gaaacactttttcacaacccatggaagcttctagtggccactatttttctgaacaagacc
agcggaaaaatggctatcccagtgctgtggcagttttttgagcgttatccatctgcagag
gtgacacgagaagctgattggaagcctatgtctgagcttttgaagcctttaggcctttat
gagctgagagccaaaacactcgtccgcttctcagatgaatatcttaccaaacagtggcgc
tatcctatcgagcttcacggtattgggaagtatggcaacgactcttacaggatcttctgt
gttgaagagtggagacaggtgacgcctgatgaccatatgttaaacaaataccacgcctgg
ctgtgggagaatcatgacaagctggaaatataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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