KEGG   Lates calcarifer (barramundi perch): 108885928
Entry
108885928         CDS       T04895                                 
Name
(RefSeq) farnesyl pyrophosphate synthase
  KO
K00787  farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf00900  Terpenoid backbone biosynthesis
lcf01100  Metabolic pathways
Module
lcf_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    108885928
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:lcf01006]
    108885928
Enzymes [BR:lcf01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     108885928
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     108885928
Prenyltransferases [BR:lcf01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   108885928
SSDB
Motif
Pfam: polyprenyl_synt Pfc11_Rna14-15-ID
Other DBs
NCBI-GeneID: 108885928
NCBI-ProteinID: XP_018535983
UniProt: A0A4W6FTJ6
Position
LG15:complement(11607196..11611073)
AA seq 358 aa
MGDSTCNGTHTKKALLSDPQLFEDQFDELVTELTKRDLNDPVLADALNRLREVLVYNAPG
GKRNRGLSVIGSLRELLPPSQLTQDTVQRALLVGWCIELLQAFFLVADDIMDASVTRRGQ
PCWYKKDGIGLDAINDSFLLEASIYRLLRRHCRDQPYYVHLLELFTETSFQTELGQALDL
MTAPPGQIDLNRFTMERYKAIVKYKTAFYSFYLPVAAAMYMAGIKSEEEHNNAKHILLEM
GEFFQIQDDYLDCYGDPAVTGKIGTDIQDNKCSWLVVTALEIMTPDQRAELEACYGRHDE
ASVEKVKALYNTLQMPTLYHKYEDESYQRLQKLIARHAQNLPHSVFLNFANKIYKRNK
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgggagacagtacatgcaatgggacgcacaccaagaaggcgttgctgtcagaccctcag
ctgtttgaagaccagtttgatgagctggtgacggagctgacaaagagggacctcaacgat
cctgtgctggctgatgctttgaacaggttgagagaggttttggtgtacaatgccccaggc
ggcaagagaaaccgaggcctatctgtgattggctcactgagggagcttctcccaccctct
cagctcacccaggacactgtgcagcgggctctgttggttggctggtgcattgagttgctt
caggcttttttcctcgtggcagatgatatcatggatgcatctgtgactcggagaggacag
ccctgctggtacaagaaggatgggataggtctggacgctatcaatgattcatttctcttg
gaagcgtcaatctacagactacttcgcagacattgcagggatcagccgtactacgtccat
ctactggagctttttactgagacatctttccagacagagcttggtcaagctctggacctc
atgacagcccctcctggtcagattgacctcaacagattcaccatggagaggtataaagct
attgtaaaatacaagactgccttctactctttttacctcccagtggcagctgcaatgtac
atggctggaatcaaaagtgaagaggagcacaacaatgccaaacacatcttacttgagatg
ggagagtttttccaaatacaggacgactacctagactgttatggtgaccctgctgtgaca
gggaagattggtacagacatccaggataacaaatgcagctggctggttgtgacagccctg
gaaatcatgactcctgatcaaagagcagagctggaggcatgttacgggcgccacgatgaa
gccagcgtagaaaaggtcaaggcgctgtacaacaccctgcaaatgccaacactgtaccac
aaatatgaagatgagagctaccagcggctacagaagctcatcgctcgtcacgctcaaaac
cttcctcactcggtcttcctcaactttgccaataaaatctacaagaggaacaagtga

  All links  
Gene (12)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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