KEGG   Liolophura japonica (common chiton): 135471307
Entry
135471307         CDS       T09976                                 
Name
(RefSeq) LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 4-like
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
ljp  Liolophura japonica (common chiton)
Pathway
ljp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ljp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    135471307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ljp03036]
    135471307
   03400 DNA repair and recombination proteins [BR:ljp03400]
    135471307
Chromosome and associated proteins [BR:ljp03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    135471307
DNA repair and recombination proteins [BR:ljp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     135471307
SSDB
Motif
Pfam: MBD HhH-GPD
Other DBs
NCBI-GeneID: 135471307
NCBI-ProteinID: XP_064606551
Position
7:55893963..55906746
AA seq 493 aa
MAGVEKVSSGDHTYGAVMNDCLPPGWTRKVTQRASGKSAGKYDVYIYSPDGRKFRSRRDL
ESYKLEMGLDLNISDFNFSVRGTVSPAAKASTSNSPGSKTAKTSAKKGASSEKTKTSGSK
TKKSSSKDRTGKNVARNLVVKMAFPTPSKRKSARQNKMANKGKMRRSNSVSAVLLSDTKT
GPGRKAVGKTDATTLQRSKSLELGKTGQSPKSPTQKEATLVMRSCKLSPKETSPNEKNNN
DTSWKSSPAIGHRLGKRKGSQCSPTAEQAPQESPGKVRRKMSANTPDELPRSRRLSAQEP
NRPIKGSRVPRRPSTSRIRHDVGKTREIRFQKSTYFRKTAKLGATETEEDLAPPKSPYNL
VQESLFMILGKLLVATVFLNKTTGKAALPILWDFFKKWPTAEATRKANWQEIADLIQPLG
LQQKRAKMLIRFSDDFLTKDWRYPIELHGIGKYGNDSYRIFCINEWKHVKPSDHKLNLYH
AWLWQNHRALGIG
NT seq 1482 nt   +upstreamnt  +downstreamnt
atggcgggtgtggaaaaggtatctagtggagaccacacatatggggctgtgatgaatgat
tgtttgccacctggatggacccgtaaggtcacacagcgtgcaagtggaaaatctgcaggc
aaatatgatgtttacatatacagtcctgacggtaggaaatttcgctctcgacgggatttg
gagagttataaattggaaatgggcctggacctgaacatcagtgactttaatttctctgtg
cgtggcacagttagcccagcagcaaaggcctctacaagtaactctccaggttcaaagact
gctaaaacctctgcaaaaaaaggtgcctcctcagagaagactaagacctcgggaagtaag
acaaaaaagtcttcttcaaaagacaggacagggaagaatgttgcgcggaacttagttgtt
aaaatggcttttcctactccttcaaagcgaaaaagtgctagacaaaataagatggccaat
aagggcaagatgagacgaagtaattctgtaagtgctgtgctcttgtctgacacaaagact
ggacctggtagaaaggctgtaggaaaaacagatgcaacaactctacagaggtccaagtca
ttggaacttggtaagactggccaaagtcccaagagcccaacgcaaaaagaagctacattg
gtgatgaggagttgtaaattatcgccaaaggaaactagccccaatgagaaaaataataac
gataccagctggaaatcttccccggctataggtcacagactggggaaaaggaaaggctcc
caatgtagtcccactgctgaacaggccccacaggaatccccgggtaaagtcagaaggaaa
atgtcagcaaacacacctgatgaactacccaggagtcgccgtttgagtgctcaggaacca
aatcgacctatcaaagggtcacgggttcccagacgaccttctacttcacgtattcgtcac
gatgttggcaagacaagagaaatacgtttccagaagagcacatacttcaggaaaacagcc
aaacttggtgccaccgaaactgaagaagacttggctcctccaaaatccccttacaatctc
gttcaagaatccctgttcatgatccttgggaaactcttggtggccacagtctttctcaat
aaaacaacaggaaaggcggccctgccaattctctgggatttctttaaaaaatggccgact
gcagaagcgactcgcaaggcaaactggcaggaaattgccgatttaattcaaccacttggt
ttacaacagaagagggctaagatgttgatacgcttctcagatgatttccttactaaggat
tggaggtatcccattgaactgcatggcattggcaaatacggcaacgattcttaccgcatt
ttctgcataaatgagtggaagcatgtgaagcccagcgaccataaactgaatttataccat
gcctggctttggcaaaaccacagggcactgggaataggatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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