KEGG   Methylobacterium sp. NMS14P: LOK46_05885
Entry
LOK46_05885       CDS       T10783                                 
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
mens  Methylobacterium sp. NMS14P
Pathway
mens03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mens00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LOK46_05885 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mens03019]
    LOK46_05885 (recQ)
   03400 DNA repair and recombination proteins [BR:mens03400]
    LOK46_05885 (recQ)
Enzymes [BR:mens01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LOK46_05885 (recQ)
Messenger RNA biogenesis [BR:mens03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LOK46_05885 (recQ)
DNA repair and recombination proteins [BR:mens03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LOK46_05885 (recQ)
SSDB
Motif
Pfam: RQC DEAD HRDC Helicase_C RecQ_Zn_bind ResIII GARS_N
Other DBs
NCBI-ProteinID: WCS26363
Position
complement(1248929..1250770)
AA seq 613 aa
MTRLDEARAALKKTFGYEDFRPGQDEVIGAVLDGTDVFAVMPTGSGKSMTYQLPALVDPG
LTVVVSPLIALMHDQVQQMRSVGIRAATLNSTVAESESRETWRALRSGDLRLLFVSPERL
LMDGCMDALRGAGVRRLAVDEAHCVSQWGHDFRPEYREIARARTALGNVQTLALTATADA
ATRAEIAERLFPQDRPPRIFVHSFDRPNIRLTFQPKDNPARQIERFLKHRRAESGIIYCS
SRKRTEQLAETLRKDGFDALPYHAGLDQATRMANQDRFLQEDGVVMTATVAFGMGINKPD
VRFVCHADMPNNVEGYYQEIGRAGRDGLPADTLTLYGLDDMALRRRQIDEKEISDDRRRV
ERRKLEAMITLCEGATCRRQSLLAYFGEASEPCGRCDLCRGGVTLVDGTVPAQKILSAIV
RTGQRFGAAYVCDVVHGKESDQIRRNGHASLKTFGVGADKPVAAWRAILRQLFAAGAIAE
NADGYGGLSMTEKGEAILFGREPVQLRPDPEPKAESRERRRPAAREDGEIALSEADEALF
QHLRGLRATLARAEGIAAFMVFPDRTLIEMARQKPVDLWALRTVHGVGERKREAYGDKFV
AAIADFLAHPPAA
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgacccgcctcgacgaggcccgcgccgcgctgaagaagacgttcggctacgaggatttc
cgccccggccaggacgaggtgatcggcgcggtgctcgacgggaccgacgtgttcgccgtg
atgcccacgggatcgggcaagtcgatgacctaccagctcccggcgctcgtcgatccgggg
ctcaccgtggtggtctcgccgctgatcgcgctgatgcacgatcaggtccagcagatgcgc
agcgtcggcatccgcgccgcgaccctcaactcgacggtggccgagtcggagtcccgcgag
acctggcgcgccctgcgctccggcgacctgcggctgctgttcgtctcccccgagcgcctg
ctgatggacggctgcatggacgccctgcgcggggccggcgtccggcggctggccgtcgat
gaggcccactgcgtctcgcagtggggacacgatttccgccccgagtaccgggagatcgcc
cgcgcccggacggcgctgggcaacgtccagaccctggcgctcaccgccaccgccgacgcc
gcgacccgcgccgagatcgccgagcggctgttcccgcaggaccggcccccgcggatcttc
gtccactccttcgaccggccgaacatccggctgaccttccagcccaaggacaacccggcc
cggcagatcgagcggttcctgaagcaccgaagggcggagagcgggatcatctactgctcg
tcgcgcaagcgcaccgagcagctcgccgagaccctccggaaggacggcttcgacgccctg
ccctaccatgccggcctcgaccaggcgacgcggatggcgaaccaggaccggttcctgcag
gaggacggggtggtgatgaccgccaccgtcgcgttcggcatgggcatcaacaagccggac
gtgcgcttcgtctgccacgccgacatgcccaacaacgtcgagggctactaccaggagatc
ggccgcgccggccgcgacgggctgccggccgacaccctgaccctctacgggctcgacgac
atggcgctccgccgccgccagatcgacgagaaggagatctcggacgaccgccgccgggtc
gagcggcgcaagctcgaggcgatgatcaccctgtgcgagggcgccacctgccgccgccag
tcgctgctcgcctatttcggcgaggcgagcgagccctgcggccgctgcgacctgtgccgc
gggggcgtgaccctcgtggacgggaccgtcccggcccagaagatcctctcggcgatcgtg
cgcaccggccagcgcttcggcgcggcctatgtctgcgacgtggtccacgggaaggagagc
gaccagatccgccgcaacggccacgcgagcctcaagaccttcggggtcggggcggacaag
ccggtggcggcctggcgggcgatcctgcgccagctcttcgcggccggggcgatcgccgag
aacgccgacggctacggcggcctgtccatgaccgagaagggcgaggcgatcctgttcggc
cgggagccggtccagctccgtcccgatccggagccgaaggccgaatcccgcgagcgccgc
cggcccgccgcccgcgaggacggcgagatcgccctctcggaggccgacgaggcgctgttc
cagcacctgcggggcctgcgcgccacgctggcccgggccgaggggatcgcggccttcatg
gtcttcccggaccgcaccctgatcgagatggcccgccagaagcccgtcgacctctgggcg
ctccgcaccgtgcacggcgtcggcgagcgcaagcgcgaggcctacggcgacaagttcgtg
gcggcgatcgccgattttctggcccatccgccggccgcgtga

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