Mesorhizobium sp. WSM4906: QAZ22_03775 Help Entry QAZ22_03775       CDS       T10806                                  Symbol ligD Name (GenBank) DNA ligase D   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism mewm  Mesorhizobium sp. WSM4906 Pathway mewm03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:mewm00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     QAZ22_03775 (ligD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mewm03400]     QAZ22_03775 (ligD) Enzymes [BR:mewm01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      QAZ22_03775 (ligD) DNA repair and recombination proteins [BR:mewm03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      QAZ22_03775 (ligD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S RNA_ligase Motif Other DBs NCBI-ProteinID:  WFP76979 Position complement(806271..808787) Genome browser AA seq 838 aa AA seqDB search MASLEQYHAKRDFRKTTEPSGKLPRHKKGEAGGIYVIQKHAATRLHYDFRLEHDGVLWSW AVTRGPSLDPHEKRLAVHVEDHPIDYASFEGTIPKGEYGGGSVIVWDDGRWVPEGDPAEG MKKGHIGFELQGYKLHGRWHLVRLKPRRGEKRDNWLLIKADDAAARPGEDILADEPQSVK SGLTIEEVGEGEAARGAKPKVWHSDRPAAAKAKAGRAKRLEFIEPQLATLEKNAPSGDEW LHEVKFDGYRIQAQIAGSDVRLMTRAGLDWTKKFEGPVTAALAGLKCRDAVIDGEIVVLA DNGVSSFPLLQAALSAGRADRFIYYVFDLMRLDGKDLRREPLVERKQVLAELLGEQPQDS ALRFSDHFHEPGKVMLEHVCRMGLEGVVSKRADAPYRSGRGLTWVKSKCTLRQEFVIGGY LPSDKTGRGLRSLLVGYFEGGKLHYAGRVGTGFSGKVMAGLKKKLDGIEAKQSPFSTAVP KGKGLTWVKPELVGEVEFRSWTSDRIIRHASFQGLREDKPAEEVVQEKPKQAGGKAEAKS GGGRTAPKTAAGTATTSIKLSHPDKLLWPDEKVSKQDLLDHYALVWPRMQQFVVNRPLSL VRAPDGIHGQRFFQKHASPGMSDKIARMKDPTDGEEILFIKDFDGLAALVQYGVVEVHIW GSTIDELEKPDQIIFDLDPDEGVDVSRVREAALDIHKQLDELSLPNLVKTSGGKGYHVLV PLKASADWDEVKDFAHDFARALEQASPDRYTATLSKKARTDKIFVDYLRNSRGATTVAPY SSRAKKFATISMPVTWPELEKGLPPNAFPLGDETTLSELKKADPWKDFFKLGKVLKRG NT seq 2517 nt NT seq  +upstreamnt  +downstreamnt atggccagcctcgagcaatatcatgccaagcgcgatttccgcaaaaccaccgagccttcc ggcaagctgcctcggcacaagaaaggcgaggccggcggcatctacgtcatccagaaacac gccgccacccgcctccactatgatttccggctcgagcatgacggcgtgctgtggagctgg gcggtgacgcgcggcccgagcctcgatccgcatgagaagcggctggccgtgcatgtcgag gaccatccgatcgactatgcctcgttcgagggcacaattccgaagggcgagtatggcggc ggctcggtcatcgtctgggacgacggtcgctgggtcccggaaggcgatcccgccgaaggc atgaagaaaggccatatcggcttcgagctccagggctacaagctgcatggacgctggcat ttggtccgcctgaaaccccgccgcggcgaaaagcgcgacaactggctgttgatcaaggcc gacgatgccgccgcccgtcccggcgaggatatcctggcggacgagccgcaatcggtgaaa tccggcctcaccatcgaggaggtcggcgaaggcgaggcggccaggggcgcgaagccaaag gtctggcactccgacagaccggccgccgccaaggcaaaggccggacgcgccaagcgcctg gagttcatcgagccgcagctcgccacgctggaaaagaatgcgccttccggcgatgaatgg ctgcacgaggtgaaattcgacggctaccgcatccaggcgcagatcgccggcagcgatgtc aggctgatgacgcgcgccggcctcgattggacgaagaaattcgaaggccccgtcaccgcg gcgcttgccgggctgaaatgccgcgacgcggtgatcgacggcgagatcgtcgtgctggcc gacaacggcgtgtcgtcctttccgctgctgcaggcggcactttcggccggccgcgccgat cgcttcatctactatgtcttcgacctgatgcggctcgatggcaaggatttgcgccgtgag ccgctggtcgagcgcaagcaggtcctggccgaactgctcggcgagcagccgcaggactcg gcgctgcgcttcagcgatcattttcacgaacccggcaaggtcatgctggagcatgtctgc cgcatgggtctcgaaggcgtggtctcgaaacgcgccgacgcgccttaccgcagcgggcgt ggcctcacctgggtgaagtcgaaatgcacgctgcgccaggaattcgtcatcggcggctac ctgccctcggacaagaccggacgcgggctgcggtcgctgctcgtcggctatttcgaaggc ggcaagctgcattatgccggtcgcgtcggcacaggcttttccggcaaggtgatggccggt ctcaagaagaagctcgacggcatcgaggcgaagcagtcgcctttctccacggccgtgccg aagggcaagggcctcacctgggtcaagcccgagctcgtcggcgaggtggagtttcgcagc tggacatccgaccgtataatccgccacgcctcgttccagggattgcgtgaggacaagccg gcggaggaagtcgtgcaggaaaagccgaagcaagccggcggtaaggccgaggcaaaatcg ggcggcggcaggaccgcgccgaaaaccgcggccggaacggcgacgacctcgataaaactt tcgcatcccgacaagctgctgtggcccgacgaaaaggtctccaagcaggatctgctcgac cactacgcgctggtctggccgcgcatgcagcaattcgtcgtcaaccggccgctgagcctg gtgcgggcgcccgacggcatccacggccagcgcttcttccagaaacatgcctcgccgggc atgagcgacaagatcgccaggatgaaggatccgaccgacggcgaggagatcctgttcatc aaggatttcgacgggcttgcggcgctggttcagtatggcgtggtcgaggtccatatctgg ggctcgaccatcgatgagctggaaaagcccgaccagatcatcttcgacctcgatcccgac gaaggtgtcgacgtcagccgcgtgcgcgaagcggcgctcgacatccacaagcagctcgac gagctgtcgttgcccaacctggtcaagacctccggcggcaagggttatcacgtgctggtg ccgctgaaggcgtcggcggactgggacgaggtcaaggacttcgcccatgattttgcccgg gcgctggaacaggcatcgcccgaccgctacacggcaacgctgtcgaagaaggcgcgcacc gacaagatcttcgtcgactatctgcgcaacagccgcggcgcgaccacggtcgcgccctac tcctcgcgcgccaagaagttcgccacgatatcgatgccggtgacctggccggaactcgaa aagggcctgccgcccaacgccttcccgctcggcgacgagacgacgctgagcgagctgaaa aaggccgatccgtggaaggatttcttcaagctgggcaaggtgttgaagcgggggtaa

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