KEGG T07632: I6I89

Myroides odoratus: I6I89_02160

Entry

I6I89_02160       CDS       T07632

Name

(GenBank) RecQ family ATP-dependent DNA helicase

K03654

ATP-dependent DNA helicase RecQ [EC:5.6.2.4]

Organism

moa Myroides odoratus

Pathway

moa03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:moa00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    I6I89_02160
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:moa03019]
    I6I89_02160
   03400 DNA repair and recombination proteins [BR:moa03400]
    I6I89_02160
Enzymes [BR:moa01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     I6I89_02160
Messenger RNA biogenesis [BR:moa03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     I6I89_02160
DNA repair and recombination proteins [BR:moa03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      I6I89_02160

SSDB

Motif

Pfam:

DEAD RecQ-1-like_HTH Helicase_C RQC HRDC RecQ_Zn_bind HTH_40 ResIII Helicase_Sgs1 Peptidase_C36

Other DBs

NCBI-ProteinID:

QQU04120

Position

464855..467050

AA seq 731 aa
MKSIEIDLHKELKRFFGFSQFKGLQEDVVKSIISGHNTFVIMPTGGGKSLCYQLPALVLD
GTAIVVSPLIALMKNQVDAIRSLSTEHGIAHVLNSSLTKTEVNQVKEDIKQGITKLLYVA
PESLTKEEYVNFLQEVKLSFVAIDEAHCISEWGHDFRPEYRNLRNIIRQLGDIPIIGLTA
TATPKVQEDILKNLEIPNANVFKASFNRPNLYYEIKPKTKNIESDIIRFIKQRKGKSGVI
YCLSRKKVEEIANVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGID
KPDVRYVIHHDIPKSLESYYQETGRAGRDGGEGWCLAYYSYKDIEKLEKFMAGKPIAEQE
IGIALLQEVVAYAETSMSRRKFLLHYFGEEFDEVHGDGADMDDNVRNPKKKSEAKDELQN
VLKIISETKQVYKTKEIVFVLLGKLNALLKVNKTDTQAFFGSGKNQDERFWLALIRQANV
AGYLKKDIESYGVLKLTELGERFISTPVSFLMTEDHEYADGDTAIENDAPRAELVIDQVL
INLLKDLRKKVAKKAGVPPFVVFQDPSLEEMCLKYPITLEEMANIIGVSDGKAKKFGKDF
VDAIKNYVEENDIIRPDDLVVKSTGANSALKLYIIQSVDRKLSLDDIAKAKGLDMDALLK
EMEQIVYSGTKLNIDYWLDEVLDEDQQEEIYDYFMDSESDNIKTAMAEFDGEYDTEELRL
MRIQFITKEAN

NT seq 2196 nt +upstreamnt +downstreamnt
atgaaatcaattgaaattgacttgcacaaagagttaaagagattttttggcttttcccag
tttaagggtcttcaagaagacgtggtgaaaagtattatctccgggcacaatacatttgtg
attatgcctacaggtggtggtaaatcactttgctatcaattacctgcattggttttagac
ggaacagctatcgttgtttctccgttgatcgctctgatgaaaaatcaagttgacgctatt
cgcagcttgtctacagagcatggaattgcccatgttttaaactcttctttgaccaaaacg
gaagtaaaccaggtaaaagaagatattaagcaaggaataacaaaattgttatatgtagcc
ccagaatcactaaccaaagaagagtatgtcaacttcttacaagaggtaaaactgtctttc
gtcgctattgatgaagcacactgtatctcagaatgggggcatgactttagaccagaatat
agaaacctaaggaatattatccgacaattaggcgatattcccattattggtctaacagct
actgctacgcccaaagtacaagaggatattctgaaaaacctcgaaattcccaacgctaat
gtttttaaagcctcatttaatagacccaatctatactatgagattaaacccaaaacgaaa
aacattgagagtgatattattcgctttattaagcagcgaaaaggaaaatcaggtgtgatt
tattgcttaagtagaaaaaaagtagaagaaattgccaatgtattgcaagtaaatggaatt
agcgctgttccctatcatgcgggattagatgctaaaaccagagccaaacaccaagatatg
ttcctgatggaagatgtcgatgtggttgtggcgacgattgctttcggtatgggaattgat
aaacccgatgtacgttatgttattcatcacgatattccaaagtcactggaaagttattac
caagaaacaggtagagctggacgagatggaggagaaggatggtgcttggcgtattactcg
tataaagatattgagaaattagaaaagttcatggctgggaagccaattgcggaacaggaa
attggaatcgccttgctgcaagaagtagtcgcttatgctgaaacatccatgtcaagacgc
aaatttttactgcattattttggagaggaatttgacgaagtacatggagatggtgcggat
atggatgataatgttcgcaatccgaaaaagaaaagtgaagcgaaagatgaacttcaaaat
gtgttgaagatcattagtgaaacaaaacaggtatacaaaaccaaagaaattgtatttgta
cttttaggaaagttaaatgctttgttgaaagtgaataaaacagatacacaagcattcttt
ggttctggaaaaaatcaagacgaacgtttttggttggctttaattagacaagcaaacgta
gcgggttatctcaaaaaagatattgaatcttacggtgttttgaaattgacagaattaggg
gaacgttttatctcaactcctgtttctttcttgatgacagaagatcacgaatatgctgat
ggagatactgcgattgaaaatgatgcgccaagagcggaacttgttattgaccaagtgttg
attaatctcttaaaagatttacgtaaaaaagtagccaaaaaagctggtgttcctcctttt
gttgtttttcaagacccttctttagaagagatgtgcttgaaatatccaattacattagag
gaaatggcaaacatcattggagtgagtgatggaaaggcgaaaaagtttgggaaagatttt
gttgatgcaattaaaaattacgtagaagaaaacgatattatccgaccagatgatttagtc
gtaaaatctacaggagctaattctgctttgaaactttatattattcaaagtgtcgatcgt
aaattgtctttggacgatattgcgaaagcaaaaggattggatatggatgccctattgaaa
gaaatggagcaaatcgtatattccggaactaaattgaatatcgattattggttggatgaa
gtattagatgaagatcaacaagaagaaatctacgattacttcatggattcggaatctgat
aatattaaaaccgcaatggccgaatttgatggtgaatatgatacggaagaattgcgatta
atgcgcattcagtttattacaaaagaagcaaattaa

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (10)   
   Pfam (10)   
All databases (11)   

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