KEGG   Nothobranchius furzeri (turquoise killifish): 107378492
Entry
107378492         CDS       T05163                                 
Name
(RefSeq) pollen-specific leucine-rich repeat extensin-like protein 1
  KO
K02620  transcription factor 7
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04310  Wnt signaling pathway
nfu04519  Cadherin signaling
nfu04520  Adherens junction
nfu04916  Melanogenesis
nfu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    107378492
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    107378492
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    107378492
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    107378492
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    107378492
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nfu03000]
    107378492
Transcription factors [BR:nfu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG TCF-1
    107378492
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 MlaC
Other DBs
NCBI-GeneID: 107378492
NCBI-ProteinID: XP_015804220
Position
sgr05:8876182..8879189
AA seq 256 aa
MEENMRLLESFERYMEDLDREGEFFSLLDEIFQEYQPVPFPPPPSPLEHPPSPLLHSFSP
PPSPPLEHPPSPLLHSFSPPPSPPLVHPPSPLLHSFAPASSPPPPVVSSLPSPHTPTVPS
PPPSLLPGTPPAAPASAPVSDPNKRKREHQQEDRPYVKKPPNAFMIFLRDQRPKVVAELN
PKDSAAVNAVVGQRWRELSPEQRNIYIDQAHKEQRLHEQQHPGWVPNYIRKAKGVKKEPA
ASSAASSSPGGSSRSQ
NT seq 771 nt   +upstreamnt  +downstreamnt
atggaggaaaacatgcgcctcctggagagttttgagaggtacatggaggacttggacaga
gagggggagtttttctcccttctggacgagatctttcaggagtaccagcccgttcctttt
cctcctccaccttctcctctcgaacatcctccctcacctctccttcattctttttctcct
ccaccgtctcctcctctcgaacatcctccctcacctctccttcattctttttctcctcca
ccgtctcctcctcttgtacatcctccctcacctctccttcattcttttgctcctgcttca
tctccccctcctcctgttgtttcttctctgccttcacctcatactcccactgtcccttct
ccgccaccatcccttcttcctgggactccacctgctgctcctgcttctgctccggtctcc
gacccaaataagagaaagcgtgagcaccagcaggaggaccgtccctatgtgaagaagcca
ccaaatgccttcatgatcttcctgcgggaccagaggcccaaggtggtggctgagctgaat
ccgaaagacagcgctgctgtcaacgccgtcgtaggccagaggtggagggaactgtctcct
gagcagaggaacatctacattgaccaggctcacaaggaacagaggctccacgagcagcag
cacccaggctgggtccccaactacatccgtaaggcaaaaggcgttaagaaggagccggcc
gccagctctgcagcgtccagcagcccaggagggagcagccgcagccagtga

  All links  
Gene (86)   
   RefGene (83)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (90)   

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