KEGG   Niabella insulamsoli: ABDK00_004055
Entry
ABDK00_004055     CDS       T11434                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
nij  Niabella insulamsoli
Pathway
nij03030  DNA replication
nij03430  Mismatch repair
nij03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nij00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ABDK00_004055 (dnaX)
   03430 Mismatch repair
    ABDK00_004055 (dnaX)
   03440 Homologous recombination
    ABDK00_004055 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nij03032]
    ABDK00_004055 (dnaX)
   03400 DNA repair and recombination proteins [BR:nij03400]
    ABDK00_004055 (dnaX)
Enzymes [BR:nij01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ABDK00_004055 (dnaX)
DNA replication proteins [BR:nij03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ABDK00_004055 (dnaX)
DNA repair and recombination proteins [BR:nij03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ABDK00_004055 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNAX_ATPase_lid AAA DUF8439 DNA_pol3_gamma3 RuvB_N AAA_22 AAA_5 RCF1-5-like_lid AAA_14 AAA_30 Rad17 AAA_2 TIP49 AAA_19 AAA_16 AAA_18 AAA_7 NTPase_1 AAA_24 Mg_chelatase nSTAND3 Sigma54_activ_2 RNA_helicase DUF8493 iSTAND PIF1 ABC_tran TsaE Sirohm_synth_C
Other DBs
NCBI-ProteinID: XTN42203
Position
complement(936955..938736)
AA seq 593 aa
MDKFIVSARKYRPQNFDSVVGQQHITTTLRNAIKQNQLAHAFLFCGPRGVGKTTCARILA
KTINCENQTADGEACNECQSCVSFNRGSSLNIHELDAASNNSVDDIRTLVDQVRFAPQAG
KYKVYIIDEVHMLSSAAFNAFLKTLEEPPPYAIFILATTEKHKILPTILSRCQIFDFKRI
TTNDTVEHLEDICKKEGVHTDKASLHLIAQKSEGCMRDALSIMDKIVSFSNGEISYDNTL
EHLNILDEDYYFRLMTFMQEQDLTGAMLLYEDINRKGFEGDLVLNGMASFIRNLLVSKDE
KVVALLDTVESFKEKYVQTAKQVPTPLLISALNILSEAEIGYRSARNKRLHVELCLIKLC
YLQQAMQVSLNENSVSKKKLTESTGAVAFRQIQPVAAKTAAAAPKTKVPASPAAKLMIDE
APAAPPQKKAAPAASMPAPPPPPTGKKINSLEKLRKQFKEIAPEKEDIPLEETAVLKAWE
KFTQQLRDNRNPAAQSFALATVKIVDTNSFYVYTSNPLENRFVEITKNDAAEFLKEELQN
SQLQIFNVINPNQQVQQEAIEKPLTIVDQYKKMIEKYPLVHQFKEKLKLELGR
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggataagtttattgtttcggcgagaaaatacaggccccagaattttgatagcgtggtg
gggcagcaacacattacgaccactttaagaaatgcgatcaaacagaaccaactggcgcat
gcttttcttttttgtggcccgcgcggtgtgggcaaaacaacctgcgcccggatcctggcg
aaaaccatcaattgcgaaaatcaaacagccgatggtgaagcctgtaatgaatgtcaatcc
tgcgtctcattcaatcgcggaagctcgctcaatatccacgagctcgatgcggcgagtaat
aactcggttgatgatatacgaacactggtagatcaggtgagattcgcccctcaggctggc
aaatacaaagtctacattatcgatgaggtgcacatgctcagctccgccgccttcaacgca
tttttaaaaacgttggaagagccgccaccttacgccatttttattttagccactacggaa
aaacataaaattcttccgaccattttaagcagatgccaaatcttcgattttaaaaggatt
acaaccaacgacaccgttgaacatctggaagatatctgcaaaaaagaaggcgttcatacc
gataaagcttcattacacctgatcgctcaaaaaagcgaaggatgtatgcgcgatgccttg
agcatcatggacaagattgttagtttcagcaatggcgaaataagctatgacaacacactc
gagcatctcaatatactggacgaagattattatttccgcctgatgacattcatgcaggaa
caagatctcaccggcgctatgcttttatatgaagatattaaccgaaaaggttttgagggc
gatctggttttaaacggcatggcttcatttataagaaacctgttggtaagcaaggatgaa
aaagtagtggctttgttggatactgttgaaagttttaaagaaaaatatgttcaaacagcg
aaacaagttcccacgccgcttctgatcagcgccttaaacattctcagcgaagcagaaata
ggttaccgctccgcccgcaacaaaaggctgcatgtagaactctgcctgattaaactttgc
tatttgcaacaggccatgcaggtgtcgctgaatgaaaattcggtatcaaaaaaaaaacta
actgagtcaacgggcgcggtagcgttcagacaaatacaacccgtggcggcaaaaacggct
gctgcagcgcctaagaccaaagtacccgcgtcaccagcggccaaacttatgatagacgaa
gcgcctgccgcgccgccgcaaaaaaaagcagcacccgcagcaagcatgccagcgccgccg
cctccgcccacaggcaaaaagatcaacagcctggaaaaactcagaaaacagtttaaagaa
attgccccggaaaaagaagatataccgctcgaagaaacagcggtgttgaaggcctgggaa
aaatttacacagcagctacgcgacaaccgaaatccagccgctcaaagttttgccctggca
accgtaaaaattgtcgataccaactcattttacgtctacacttcgaatccgctggaaaac
cgttttgtcgagattactaaaaacgacgccgccgaatttttgaaagaagaattacagaat
tcgcagcttcagatttttaacgtcattaaccccaaccagcaggtgcagcaggaagcaatc
gaaaagccgctcaccatcgtcgatcagtacaaaaaaatgattgagaaatatccgctagta
catcaatttaaagaaaaattaaagctggagcttgggaggtga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (30)   
   Pfam (30)   
All databases (31)   

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