KEGG   Oxyura jamaicensis (ruddy duck): 118156751
Entry
118156751         CDS       T11549                                 
Symbol
APTX
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:oja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    118156751 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oja03400]
    118156751 (APTX)
Enzymes [BR:oja01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     118156751 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     118156751 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     118156751 (APTX)
DNA repair and recombination proteins [BR:oja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     118156751 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     118156751 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT DUF7407 zf-C2H2_4 FHA GSP_synth zf-C2H2_6 zf-C2H2
Other DBs
NCBI-GeneID: 118156751
NCBI-ProteinID: XP_035166847
Position
Z:68244055..68254111
AA seq 350 aa
MRACWLVPREGRSHRIPLPHSAAVVVGRCPETGITDRRCSRRQVQLKADCNKGYVTVKQI
GINPTSVDLVDVGKDEEVKMRPGQVLHIVNKLYPYTVHFAEESGKTVTEAQEKVQTEKRP
CEELSENDDIENVPRKAKKTEVVDTQGSSAELKLSKTSVSPHEGTSSKKEHLGHWSQGLK
SSMQDPKMQVYKDEKTVVIKDKYPKARYHWLVLPWDSIPSLKAVTSEHLGLLEHMHEVGE
KMIEQCPARGSLEFRLGYHAIPSMSHLHLHVISQDFDSAALKTKKHWNSFTTEYFLNSQD
VIEMVKSKGKVTVKDHASELLKLPLRCHLCKQQLSTIPQLKEHLRKHWPK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgcgcgcgtgctggctggtgccgagggagggccgcagccatcggatcccgctgccgcac
tcggccgccgtggtggtggggcgctgcccggagacggggataacggacaggaggtgctcg
cggcggcaagttcagctaaaagccgactgtaacaaggggtatgtcacagttaaacagata
ggaatcaacccaactagtgttgatttagtggatgttggcaaggatgaagaggtgaaaatg
aggccaggccaagttctgcacattgtgaataaactttacccctacacggtgcactttgct
gaagaatcggggaaaactgttacagaagcacaagagaaagtacaaactgaaaagaggcca
tgtgaggaactctctgagaacgatgatatagaaaatgtgcccagaaaagcaaagaaaacg
gaggtggtggatacacaaggcagttctgcagagctcaagctaagcaagaccagtgtgtct
ccacacgaagggacttcgagcaaaaaggaacatctgggacactggagtcagggtctaaag
agttccatgcaagatccaaaaatgcaggtttacaaagatgagaagactgtagtcatcaaa
gataaatatcctaaagcacgttaccactggcttgttttaccatgggactccattccaagc
ctgaaggcggtcaccagtgagcatcttggactcctggaacacatgcatgaagttggggaa
aaaatgattgagcagtgccctgctcgagggagtctggagttccgactgggttaccacgcc
attcccagtatgagtcacctgcatttgcatgtaatcagccaggattttgattctgctgcc
ctgaaaaccaaaaagcactggaactcttttactacagaatacttcttaaactcccaagat
gtgatagagatggtaaaaagcaagggaaaagtaacagtgaaagatcatgcttctgaactt
ctcaaattgcccctcagatgccatctttgcaaacaacagctatccactatcccacagcta
aaggagcacctcaggaaacactggccaaaatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (14)   

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