KEGG   Oncorhynchus nerka (sockeye salmon): 115108739
Entry
115108739         CDS       T07952                                 
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like
  KO
K04852  voltage-dependent calcium channel R type alpha-1E
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04010  MAPK signaling pathway
one04020  Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    115108739
   04020 Calcium signaling pathway
    115108739
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:one04040]
    115108739
Ion channels [BR:one04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   115108739
SSDB
Motif
Pfam: Ion_trans GPHH Ca_chan_IQ PKD_channel Phage_TAC_15
Other DBs
NCBI-GeneID: 115108739
NCBI-ProteinID: XP_029489219
Position
LG24:complement(48507438..48577861)
AA seq 2116 aa
MKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHNTCLPMPNILENETVDKSESEFPCGV
RKCPDKYACSETWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGPTWNCM
YFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRAWIDR
AEEVMLAEENKNLGPSALDVLKRTTIKRRGVDAVHRGPEEEQYGDISSVGIPMTRASIRS
AKRGPTAYFKRKERLLRISIRRMVKTHTFYWTVLGLVALNTLCVAIVHHNQPHWLSVFLY
YAEFLFLGLFLTEMCLKMYSLGPRLYFHSAFNRFDCGVIVGSIFEVMWGFFRPDMSFGIS
VLRALRLLRIFKITKYWASLRNLVVSLMNSMKSIISLIFLLFLFILVFALLGMQLFGGRF
IFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLFG
NYTLLNVFLAIAVDNLANAQELTKDEEDEEAAFNQKHALQKAKEVGAMSSLMSSHRRRRP
YLYRKRAIHRSRPAYSLEEAESLAEGPPCPPLNSSNSFMSRGERRRRMTMSVWEQRTSQL
RRHRQMSSREILFSSPSEEQEAPPGCPHNLKATGTPTGSLKLADPTADPTASTAQPPKPM
DQTLEEPPLSMGVLEAPLSVPLAEPPIPIDSPLPDPPTSTVVSIPEPTESEPCPEGQLDD
TDHCHPGLNGRRSPRLNGERRQRAVRKFRPPAGDTLTPDMAGMRLRRPRGTGHQEAQVGA
RGLDSPQGEGSSRSVSKERKTPEERQDKERRACNTAETSQPSETREAEHRQGDPNQAGGP
ELQNREEGPQSEPPPIQPFQAAVPELPEGQTRDSDTGNNATTLIQDKSPLSSSIYIEVTN
VQSSLELTPITGNSKDMEASKPEKEEEQLTSPANIVTPDSMFIFKPGNPIRRACHYVVNL
RYFETCILLVIAASSIALAAEDPVSATSNWNKVLRYFDYVFTGVFTFEMIIKMIDQGLIL
HDGSYFRDLWNILDFIVVVGALVAFALTNVLGNNKGRDIKTIKSLRVLRVLRPLKTIKRL
PKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDGSKDTEKDCQGF
YIDYEKDKKEVKRRDWRRHDFHYDNIVWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPS
RGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAIS
AKPLTRYMPQNRQTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPAYEAVLKH
LNTAFTVLFSVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVDLQSIETFNMGFL
KLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIRLD
EETHINQHNNFKTFFGALMLLFRSATGESWQEIMLSCLGGQKCEPDPLALTSDHEERCGT
EFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAAC
GRIHYTDMYEMLTLMSPPLGLGKKCPSKVAYKRLVLMNMPVDEEMSVHFTSTLMALIRTA
LEVKIARGGEDRGQMDSDLQKEISVIWSHLSQKTLDLLVPIHKASHMTIGKIYAAMMIMD
YYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPQEILCSAKALPFLPHSPGSALTRGGFVA
LSPISPQEMFMQPMSQDLEDREEDYHNYHHHHLLHHQLHTLVPERKEFNRNLCPTNRQDA
PLRVPGRAVSIRASSMPRLAVDTQVGTDSSKSMKRSFSTIGDQCVNGLWQEEYSLKRVSP
DRLNRPRQRSIRGIRCNLREPVDHERGRSKERRHLLSPDVSRCNSEERSQDPSQERKQSR
SPSEGRTHALHRQGNTSGSPDLSSIPRGRRQLPQTPLRPRPHISYSPLVCRAHLSPPAAS
EGRARTQEAPGEMEDPSLREEGERLAPESGAGVGIGVGGPGLGVSHPHPSPHRYISEPYL
TLHEELHSPDSSGLDETLTFEAAIATSLGRANTISSAPQLRHNWQVPNGHFHKRLGQASS
VVACELLSDTDEDDRC
NT seq 6351 nt   +upstreamnt  +downstreamnt
atgaaagccatggtgccgctgctccagatcggcctgctgctcttctttgccattctcatg
tttgccatcatcggcctggagttctacagcggaaagctccacaacacctgtctgcccatg
ccaaatatcctggagaatgagacggtggacaagtcggagtcagagttcccgtgtggggtg
aggaagtgccctgacaagtacgcctgcagtgaaacctggatcggccccaacgatggcatc
acccagtttgacaacatcctgtttgctgtactcaccgtcttccagtgcatcaccatggag
ggctggaccaccgtgctctacaataccaacgatgccttaggccccacgtggaactgcatg
tacttcatccctctgataatcatcggctccttcttcgtgctgaacctggttttgggagtt
ctctcaggggagtttgccaaggagagggagcgggtggaaaaccgcagggcattcatgaag
ctccggaggcaacagcaaattgagcgggaactcaatggctaccgagcctggatcgacaga
gcagaagaggtgatgcttgcggaggagaataagaatttaggaccttctgctcttgatgtg
ctgaagaggaccaccatcaagaggagaggggtggatgccgtccatcggggcccagaggag
gagcagtacggtgacatctcttctgtgggcatcccgatgaccagagccagcatcaggagt
gctaagagaggacccacggcttatttcaagcggaaggagcgtctgctgcgtatctctatc
cgccgcatggtgaagacacacaccttctactggaccgtactgggcctggtggccctcaac
acactctgtgtggccatcgtccatcacaaccagccccactggctgtctgtgttcctctac
tatgcagagtttctcttcctgggtctgtttctcactgagatgtgtttaaagatgtacagc
ctgggacccagactctacttccactccgccttcaaccgcttcgactgcggcgtgatagtg
ggcagcatctttgaggtgatgtgggggttcttcaggcctgacatgtccttcggcatcagt
gtgctgcgcgctctccgtctgctgaggatattcaagatcaccaagtactgggcgtcgctg
aggaacctggtggtatctctgatgaattctatgaagtccatcatcagcctcatcttcctc
ctcttcctcttcatcctggtctttgctctgctgggcatgcagctattcggtggcaggttc
atctttgaagactacactcctacaaactttgacacatttcctgctgccatcatgactgtc
tttcagatcctgacaggagaagactggaatgaggtgatgtacaatgggatccgctcccag
ggaggagtgaagtcaggaatgtggtcctccatatacttcattgtgctcacactctttggt
aactacacactgctgaatgtcttcttggccattgctgtggacaatctggctaatgcccag
gaactaaccaaggacgaagaggacgaagaggctgctttcaatcagaaacatgctctccaa
aaagccaaggaagttggggccatgtcttccctgatgtcatcacacaggaggaggagacct
tacctgtacaggaaaagagcgatacacaggagccggcctgcctactctctggaggaggct
gagagcctcgccgaggggcccccctgcccgccattgaattcctctaactctttcatgtcc
aggggagagaggagaagacggatgaccatgtctgtgtgggagcagagaaccagccaactg
cgcaggcaccggcagatgtccagccgagagatcctcttcagcagccccagtgaggagcag
gaagcgccccctggatgcccccacaacctcaaagccacaggcacacccacaggcagcctg
aagctggctgaccccacggctgaccctacggcctccacagctcagccccccaagcccatg
gaccaaactctagaggagccacccctgtccatgggggtccttgaggcccccttgtccgtc
cctttagcagagccacccatacccatcgacagtcccctgcctgacccccccacgtccaca
gttgtgtccattccggagcccactgaatctgagccatgcccagaaggccagcttgatgac
accgaccactgccacccaggtctcaatggccgcaggagccccaggttaaatggggagaga
aggcagagagcagtgcgtaagttccgccctcctgctggtgacaccctgacccctgacatg
gcagggatgaggctcaggaggccaaggggcacagggcaccaggaagcccaggttggggct
agaggcctggactcaccccagggggaagggagcagtcgctctgtcagcaaggagagaaag
accccagaggaacgacaggacaaggagaggagagcctgtaacacggcagagaccagccag
ccttctgagaccagagaagctgaacacagacagggtgaccctaaccaggctgggggtcct
gagctgcagaacagggaggagggtccacagtcagaaccaccccccattcagccatttcag
gctgcagtaccggagctcccagagggccagacaagagacagtgatactggtaacaacgcc
accactctgatccaggataagtcccctctgagctccagtatctacatagaggtgaccaat
gttcagtcttcactagagctcacccccatcacaggtaacagtaaagacatggaggcgtcc
aagcctgagaaagaagaggagcagttaaccagcccagccaatattgtcacgcctgacagc
atgttcatcttcaaacctggcaacccgatccgccgggcctgtcactatgtggtgaacctg
cgttactttgagacatgcatcctgctggtgatcgctgccagcagtatcgccctggctgca
gaggaccccgtgtcagccacctctaactggaacaaagttttgcgttactttgactacgtg
ttcacaggtgtctttacatttgaaatgataataaagatgatagaccagggcttgattctc
catgacggctcctatttccgggacctgtggaacattctagactttatcgtggtggtcgga
gctctggtggccttcgccctcacgaatgtgttgggaaataataaaggacgggacatcaaa
accatcaagtctcttcgggtcctgcgtgtcctgaggcccctgaagaccatcaagagacta
ccgaaacttaaggcagtgtttgactgtgtggtgacctctctgaagaacgtcttcaacatc
ctcatcgtctacaagctcttcatgttcatcttcgccgtcatcgctgtgcagctgttcaaa
gggaagttcttctactgcacagacggatccaaagacacagagaaggactgccaaggcttc
tacattgactatgagaaggataaaaaggaagtgaagagaagggattggaggagacatgac
ttccactatgacaacatagtctgggccctactcactctgtttactgtctccactggggag
ggctggccacaggtcctgcagcactctgtggacgtgacagaagaggacagaggtcccagc
aggggcaacaggatggagatgtccatattctatgtcatctactttgtggtctttcccttc
ttcttcgtcaacatctttgtggctctcatcatcatcaccttccaggagcagggagacaag
atgatggaggaatgcagcttggagaagaacgagagggcttgcattgactttgccataagt
gccaaacccctgacccgctacatgcctcagaacaggcagacgttccagtaccgcctctgg
cactttgtggtctccccctcctttgagtacactgtgctggccatgattgcactcaacacc
attgtcctgatgatgaagtattactctgccccaccagcatatgaggctgtgctgaaacac
ctgaacacagctttcactgtgctcttctctgtggagtgtgtcctcaagatcatggccttt
ggctttctgaactactttcgagacacttggaatatattcgacttcatcacagttttggga
agcatcacagaaatagtggtagacttgcagtcaattgagaccttcaacatgggtttcctg
aagctgttccgtgcagccagactgatcaagctgttgaggcagggttacaccatccgcatc
ctgctctggacctttgtccagtcctttaaggctctcccctacgtttgtctgctcattgcc
atgctctttttcatatatgcaatcatcggaatgcaggtttttggaaacatcagactggat
gaggagactcacatcaaccaacacaacaacttcaagaccttttttggtgctctgatgttg
ctattcaggagtgccacgggggagtcgtggcaggagatcatgctgtcatgtttaggaggg
cagaagtgtgagccagaccccttagctctaacatcagaccacgaggagcgctgtggaact
gagtttgcctacttctactttgtctccttcatcttcttcagttcatttctgatgctgaat
ctgtttgtggctgtaatcatggacaactttgagtacctcacccgggattcctcgatattg
gggcctcaccacctggatgagtttgttcgtatctggggtgaatatgaccgagctgcttgc
gggcgtattcattacactgacatgtatgaaatgctgaccctcatgtcgccacctctaggc
ctcggcaagaaatgtccatccaaagtggcttataagaggctggtgctaatgaacatgcct
gtggatgaagagatgtcggttcacttcacctccaccctcatggccctgatccgaaccgcc
ctcgaggtgaagatagccagaggaggggaggaccgaggtcagatggattcagatctacag
aaggagataagtgtcatttggtcacacctttcacagaagaccctggacctgcttgtcccc
atccacaaagccagtcatatgaccattgggaagatctatgcagccatgatgatcatggac
tactacaagcagagcaaagccaagaagctcaggcaacagctggaggagcagaaacacgct
cccatgttccagcgtatggatgcgtcctctctgcctcaagagatcctctgcagtgccaaa
gccctccctttcctgccccacagccctggatctgccctgaccagaggaggatttgtggcc
ttgagtcccatatcccctcaggagatgttcatgcagcccatgtcccaggacctagaggac
agagaggaggactaccacaactatcatcaccaccacctgctccaccaccagctccacaca
ctggttccggagcgcaaagagtttaaccgcaacctttgccccactaacaggcaggatgcc
ccactcagggtgcccgggcgggcagtctctatccgagcctcctctatgcctcggctggct
gtagacacacaggtggggacagacagcagcaaatcgatgaagcgctccttctccactatt
ggggatcaatgtgtgaatggcctgtggcaggaggagtactctctgaagagggtcagtcct
gaccgtctgaacagaccacgacagaggagcatcagaggaatcaggtgcaacctcagggaa
ccagtggatcatgagcgggggcgctccaaagagaggcgtcacctgctgtctcccgacgtg
tcccgctgcaactctgaggagcggagccaggacccgtcacaagaacgcaagcagtcccgt
tcccccagtgagggacgcacacatgccctccacagacagggcaacacttcaggcagccca
gacctgtccagcataccccgcggccggcgccagctcccccagacgcccttgcggccacgc
cctcacatctcctactcccccctggtgtgccgagcccacctctccccccctgctgccagt
gagggcagagcccggacccaggaggcccccggagagatggaggatccctcgttgcgggag
gagggggagaggctagccccagagtcaggagcgggggtgggaataggggtgggtggccca
gggttaggggtcagtcacccgcacccctcacctcaccggtacatctcggagccgtacctg
accctgcacgaggagttacacagcccagactcctcaggcctggatgagactctgaccttc
gaggcggccattgcaaccagtctgggccgggccaacaccatcagctctgccccccagctc
aggcacaactggcaggtccccaacggacacttccataaacgcctgggtcaggccagctct
gtggttgcctgcgagctcttgagtgacacggacgaggatgaccgctgttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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