KEGG   Oncorhynchus nerka (sockeye salmon): 115130805
Entry
115130805         CDS       T07952                                 
Symbol
neil3
Name
(RefSeq) endonuclease 8-like 3
  KO
K10569  endonuclease VIII-like 3 [EC:3.2.2.- 4.2.99.18]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115130805 (neil3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:one03400]
    115130805 (neil3)
Enzymes [BR:one01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     115130805 (neil3)
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     115130805 (neil3)
SSDB
Motif
Pfam: Zn_ribbon_GRF H2TH Fapy_DNA_glyco Zn_ribbon_RanBP zf-FPG_IleRS
Other DBs
NCBI-GeneID: 115130805
NCBI-ProteinID: XP_029518120
Position
LG6:43447867..43452882
AA seq 589 aa
MVEGPGCTLNGEKICSKVQRGQKVKEFRGSLTTNTQRNATNTISFQIFMGCQYTGVETLG
KELFMYFGQRALRVHFGMDGSMRINPTDIKSRKGSPPVLEIHLTNDTVSFFDSTVEIRLT
EDCEQRVRAMESLDVCSCKFSFSHAEETVRRQSCRMLCDVLLDQAVLPGVGNIIKNEALF
DSGLHPSVKVNQLTDTQLHHLVKMTRDFTLLFYKCRKTGSPLNKHYKVYKRPQCGQCNGA
VTVCRLGDNGRMTYFCDRCQTGDPSEVNVSKLPTRNTLVGWAYQGSMGSNDHVAKREEEE
WACQLCTLINQPMSKACDACLTPRPELPKDNASPESSPFTRDLIKYPCNAFSKPQEGLKV
NRRAAFGNTTLMFTDLSPKASRVNSPLPLSSTNSQLNSTARGLSKHNVCQGKISSPNYAS
GGWQDKSGELSKGESTMVSYSQPHKKMRIDHSPFSVSNKPQNGTHHNLSPPQNNAPTGTT
QTQSPPSNPCCVSHGRPSVLRLVTKQGDNKGRQFYTCSLPRETQCKFFEWADTHFPFCNH
AKRCLMRTVLKLGPNNGRNFYVCSFPKGKQCDFFQWAENGPGISILPGC
NT seq 1770 nt   +upstreamnt  +downstreamnt
atggttgagggtccaggatgcacattgaatggagaaaagatctgctcgaaggtccaaaga
ggacagaaggtgaaagaattcaggggaagcttgacgacaaacacacaaaggaatgccacc
aatacgatctccttccagatattcatgggctgtcaatacacaggagttgagacccttgga
aaggaactcttcatgtactttggccaaagagctctgagagtccactttggtatggatggc
tctatgcgaatcaaccccactgacatcaaaagcagaaagggatcaccccctgtgctggag
atccacctgaccaatgacacagtctccttctttgactctactgtggaaatcagactgacg
gaggactgtgaacagagagtgagagctatggagagtctggatgtttgctcctgtaaattc
agcttctcccacgcggaggagactgtgaggaggcagagctgcaggatgctgtgtgacgta
ctcctagaccaggccgtcctaccaggagtgggaaacatcattaagaacgaagccctgttt
gactccggtcttcacccttctgttaaagtcaatcaactcacggatacccagctccaccat
cttgtgaaaatgacacgagatttcaccctcctattttacaagtgccgtaagacaggctcc
cctctcaacaaacactacaaggtctacaaacggcctcagtgtggtcagtgcaatggggcc
gtcaccgtctgtcgcctcggggacaacggaaggatgacgtacttctgcgaccgctgccag
actggggacccaagtgaggttaacgtgagcaagctcccaaccaggaacacgttagttggc
tgggcttaccaaggcagcatggggagcaatgatcatgtggccaagagggaggaagaggag
tgggcctgtcaactctgcactctgatcaaccagcctatgagcaaggcctgtgatgcctgc
ctgacccctaggcctgagctccccaaagacaatgccagccccgagagttcacccttcacc
agagatctgatcaagtacccctgcaatgccttctccaaaccacaagagggcctgaaagtc
aaccgcagggccgcattcgggaacaccaccctgatgttcaccgacctcagcccaaaggcg
agccgcgtcaactctccccttcctctatcctccaccaacagtcagttaaattccacagca
agaggtttaagtaaacacaatgtctgccagggaaaaataagtagtccaaattatgcctct
ggtggctggcaggacaaaagcggggagctctccaaaggggaatcaacaatggtctcctac
agtcagccgcacaagaaaatgagaattgatcacagtcccttttctgtcagtaacaaacct
caaaacggaacccaccataatttgagtccccctcaaaacaatgcaccaactgggactaca
cagacccagtcccctcccagcaacccttgctgtgtatcccatggacggcccagtgtgctc
cgattggtcaccaagcagggggacaacaaaggacgacagttctacacctgctcgctcccc
agggagacacagtgcaaattctttgagtgggctgatacacactttccattctgtaaccat
gcaaaacgctgcctgatgaggactgtactcaaactaggaccaaacaacggccgcaacttt
tacgtatgcagttttccaaagggcaagcagtgtgatttcttccagtgggcagaaaatggt
cctggaatctccatccttcctggttgctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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