KEGG   Onychostruthus taczanowskii (white-rumped snowfinch): 121331833
Entry
121331833         CDS       T07590                                 
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
otc  Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04382  Cornified envelope formation
otc04510  Focal adhesion
otc04512  ECM-receptor interaction
otc04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:otc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121331833 (COL4A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121331833 (COL4A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121331833 (COL4A5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    121331833 (COL4A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otc04147]
    121331833 (COL4A5)
   00536 Glycosaminoglycan binding proteins [BR:otc00536]
    121331833 (COL4A5)
Exosome [BR:otc04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   121331833 (COL4A5)
Glycosaminoglycan binding proteins [BR:otc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   121331833 (COL4A5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 121331833
NCBI-ProteinID: XP_041252549
Position
Unknown
AA seq 1697 aa
MEPRRRSCSLAAGCLVLLLGCWGPQEAAAAACHGCTSLSKCDCSGVKGEKGERGFPGLEG
QPGLPGFPGPEGPPGPRGSKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPG
PQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEAGEIITSLLPGQKGDPGFPG
LPGIPGPPGSVGIPGPVGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGP
PGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPPGPPGLPGGVKGEKGEQGEPGKR
GKPGKDGEPGQPGRDGLPGGPGINGAPGRDGEKGEKGDMGPPGPPGIVVPRPGIDATVGP
KGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGITTVGPPGPPGLPGERGQKGDPGLPGVS
IPGQPGVEGPQGPPGPPGPPGPPAPSVAPGEGLCEQGPPGPPGIPGQQGFTGERGQKGDR
GDTCFNCIGTGVSGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGTPGA
PGRPGPKGDPGDVLTSPRLKGDKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSVA
FKGEMGIPGDPGIPGPPGEKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGDPGQ
TITEPGVPGPPGPPGRIGDPGLPGDPGQPGQRGLPGIPGAKGEPGIPGIGLPGPPGPKGF
PGTPGPPGAPGTPGRPGLDGPPGPPGFPGEKGDRGFGVPGPPGPPGPPGIKGVQGPKGDP
GFPGNPGLPGQAGFDGTPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGSPGPPGPVGPPG
SPGLQGVPGEKGDPGPPGFDIPGPPGDQGAPGYPGPPGLPGPQGSPGPPGRDGIPGFPGA
KGEMGVMGAPGPPGPPGTPGRNGLPGLKGNSGLPGPPGPPGPVGQKGIKGEAGLPGPPGT
LDPKQLGAKGEKGEPGVPGIPGLSGQKGYQGLPGDPGPPGLSGPPGVPGLPGIKGDTGLP
GQPGPTGPPGLKGAMGEMGLPGPPGLKGSQGLAGRPGQPGPAGFPGLKGEKGDPGLSGIG
IPGPPGPKGDLGLPGYPGSPGSKGIAGSPGLPGFPGSPGAKGEPGLPGFPGTPGIPGPKG
IEGPPGNPGLPGPPGPVGDIGRPGPPGPSGEKGQPGRDGIPGPAGQKGEPGLPGFGRPGP
PGLPGLSGQKGELGLPGPPGPPGLPGPKGEPGFQGFPGLQGPPGPPGIPGPPLEGPKGSP
GPPGVPGRPGPSGPPGPPGPEGPRGPPGSGGLKGEKGNPGPPGPPGLTGPKGDQGPPGRQ
GDPGRPGLNGMKGDPGVPGVPGFPGMKGPTGPAGPAGLTGSQGLPGPPGPPGLPGTIGRS
IVVKGDPGSPGPPGQPGSKGPPGLPGPQGLPGPIGLPGDPGRDGLPGFDGPAGRKGERGL
PGQPGSRGIQGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGFS
LLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPESMPMS
MEPLTGQSIQPFISRCVVCEAPAMVIAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGAE
GSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLKA
GDLRTRISRCQVCMKKT
NT seq 5094 nt   +upstreamnt  +downstreamnt
atggagccgcggcggcggagctgcagcctggccgccggctgcctggtgctgctgctgggg
tgctgggggccgcaggaggcggcggcggcggcttgccatggatgtacatctttatccaaa
tgtgattgcagtggagtaaaaggtgaaaagggtgaaagaggattcccaggcttggaagga
cagccaggtttgcctggatttccaggaccagaaggaccacctggtccaagaggctcaaag
ggtgacgatggtcttccagggcctattggacccaaaggaatcagaggtccaccagggctt
cccgggtttccaggaacaccaggactgcctggattgccaggacaagatgggccaccagga
cctcagggtatcccaggatgcaatggaactaagggagagcgtggattcccaggcagtcca
ggttttcctggtttacaagggcctcctggaccccctgggctgccaggtatgaagggtgaa
gcaggtgaaataattacatccttgctgccaggacagaagggtgacccaggatttccaggt
cttccaggaatacctggcccccctggctccgtgggaataccaggcccagttggcccgcca
gggcccccaggtttgacgggacctcctggcccaccagggctgccaggacccaagggtaat
atgggtttgaatttccaaggacccaaaggtgaaaaaggtgaacaaggtcttcagggacct
ccagggccaccaggacaaattggagaacagaaaagaccaaatgacattgagtttcagaaa
ggagatcagggaattccaggtgatccaggcccaccaggacttcctgggcctccaggccct
cctggtcttcccggtggtgtgaaaggtgaaaaaggtgagcaaggagaaccaggcaaaaga
ggaaagcctggcaaagatggagaacctggtcagcctggtagggatggtttacctggtggg
cctggaataaatggtgctccaggaagagatggtgaaaagggtgaaaaaggtgacatgggt
ccccctggtcctcctggaattgttgttccaagaccaggcattgatgcaacagtgggacca
aaaggtagcaaaggattgccagggcttccaggagccaaaggggagcgtggattctctggt
aggccaggcccacctggcttgccaggatctccagggatcactactgttggacctcctggc
ccacctggcttacctggtgagagaggacagaagggagatccaggtttacctggggtttct
attcctgggcaaccaggagtcgagggaccacaaggaccgccaggaccaccgggtccccca
gggccacctgcaccatctgttgctcctggtgaagggttatgtgagcaagggccaccaggt
cctccaggaattccaggacaacaaggttttacaggggagcgaggccaaaaaggtgatcga
ggagacacatgcttcaactgcataggaactggagtaagtggtcctcctggggagagggga
ccaccaggacctccgggtagtccaggttctcctggttttcctggaccaaaaggtgaaaag
gggcttcctggattaactggccttgtagggccaccaggcttcccaggcaccccaggtgct
cctggtagacctggtcctaaaggagacccaggggatgtcctgacttctccaagactgaaa
ggtgacaaaggagaccctggcttcccaggacccccaggtctccctggcatagatggcact
cctggacgagatggactgccaggtttgcctggccctaagggggaacctggcagtgttgca
ttcaaaggagaaatgggtattccaggtgacccagggataccaggtcctcctggagagaaa
gggcttcctggacctcctggttttggtccacaaggctcacctggtgaaaagggcatccaa
ggtgtatctggccgtccagggcctcctggtgtcccaggtccaaaaggtgaccctggccag
actattacagaaccaggagttcctggtccccctggtcctccaggaagaattggtgatcca
ggtcttccaggagatcctggtcagccaggtcagcgtggtttacctggcatcccaggtgca
aagggagagccaggtattcctggcattggacttccaggtccaccaggccccaagggtttc
ccagggactccaggcccacccggagctccaggaactccaggtcgccctggtctggatgga
cctcctggaccacctggtttcccaggggagaagggagaccgtggatttggagttccagga
ccacctgggcccccaggacccccaggcataaaaggagttcaaggacctaaaggtgatcct
ggtttcccaggaaatcctggtctcccaggccaggcaggctttgatggaacgccagggccc
aaaggtgaccctggaccaagtggaccaccaggacttccaggcccaccaggcatccctggc
attggtggtcaaggtcctcctggatctccaggacctccaggtcctgttggccccccaggt
tccccagggctgcagggcgttccaggggagaagggagatccaggtcctccaggcttcgat
atccctggtcctccaggtgaccaaggagctccaggatatccaggaccccctggactacca
gggcctcagggttcacctgggccccctggcagggatggaatacctggatttccaggtgcc
aaaggtgagatgggtgtcatgggagctcctggtcctccagggcctccaggaactcctgga
agaaatggtctgcctggcttgaaaggtaatagtggattacctggtccaccaggacctcct
ggacctgtggggcagaaaggcatcaaaggtgaagcaggtctgccaggtccacctggaaca
cttgatcccaaacagctgggagcaaaaggagaaaaaggcgagccgggtgttccaggcatt
cctggtttatcaggccagaaaggttatcaaggtctcccaggtgacccaggcccaccagga
cttagtggcccaccaggagtgccaggattgccaggcatcaagggagacacggggcttcct
gggcagccaggaccaacaggacctccaggattaaaaggagctatgggagagatgggcctt
ccaggcccccctgggcttaaaggcagccaaggactagcaggacgtccagggcagcctggg
cctgcaggatttcctggactcaaaggggagaaaggtgaccctggtctttcaggcattggt
attcctggtccccctggaccaaagggagatcttggcttgcctggatacccaggtagtcca
ggctctaaaggtatagctggaagtcctggtttgcctggatttccaggcagtccaggtgca
aaaggagaaccaggccttcctggattcccaggaacaccaggaattccaggaccaaaaggt
attgagggccctccaggtaatcctggcctgcctggaccacctgggccagtaggtgatatt
ggtcgtccaggcccccctggtccttcaggggaaaagggacaacctggtcgagatggtatt
cctggaccggcgggtcagaagggtgaaccaggtctaccaggttttggtcgtccaggaccc
ccaggactcccaggattgtcagggcaaaaaggagaactgggtttacccggcccaccggga
ccccctggacttccaggaccgaagggagaaccaggtttccagggattccctgggctgcag
ggtccaccaggtccaccaggaataccagggccgcctctggaaggtccgaaaggtagccct
ggcccaccaggtgttccaggaaggccaggtccctcagggcctccaggtccaccaggccca
gaaggtccacgagggccaccaggcagtggaggacttaaaggggaaaaagggaacccaggt
ccacctggtccacctggcctgactggtccaaagggagatcaaggaccacctggacgccag
ggggatcctggtcgtccaggtctgaatggaatgaagggtgaccctggggttccaggcgtt
ccaggattcccaggtatgaagggtcccactggacctgcaggacccgctggcctcacgggc
agccagggactgccaggcccaccaggtcctccaggtttaccaggtaccattggacgaagc
attgttgtcaaaggtgatcctggttccccaggtcctccaggacagcctgggtccaaaggg
ccacctggattgccagggccacagggattgccaggtccaattggtcttcctggtgaccca
gggagagatgggcttcctggttttgatggtccagcaggacgaaaaggagagagaggtctc
ccaggccagccaggttcacgaggaatacaaggacctcctggtcctgatggcttacaaggc
ccacctggtcctcctggaacagcttctgttgctcacggattccttattactcggcacagc
cagaccagggatacaccactatgtccacagggaacatcaagaatatatgatggattctct
cttctatatgtgcaaggaaatgagagagcacatggccaggatttgggtactgctgggagc
tgtcttagacgtttcagcaccatgcccttcatgttctgcaacatcaacaatgtttgtaac
tttgcatcaaggaatgactattcctactggctgtcaacccccgagtcgatgccgatgagc
atggagccactgacggggcaaagcattcagccgttcattagccgatgtgttgtgtgtgaa
gctcctgctatggtgatagctgttcacagccagaccattcagatcccttcatgtcctcca
ggctgggattccctctggattggttactctttcatgatgcacacgagtgctggggcagag
ggctctggccaggccttggcatcacctggatcctgtctggaagaattccgctcagccccg
ttcatcgaatgccacggtcggggcacctgtaattattatgccaattcatacagtttctgg
ctggcaactgtagaggtgtcagaaatgttcagcaaacctcagtctgagacactgaaagct
ggagacttgaggacgcggattagtcgttgtcaagtttgcatgaagaagacgtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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