KEGG   Puma concolor (puma): 112853268
Entry
112853268         CDS       T08890                                 
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
  KO
K08060  MHC class II transactivator [EC:2.7.11.1]
Organism
pcoo  Puma concolor (puma)
Pathway
pcoo04612  Antigen processing and presentation
pcoo05145  Toxoplasmosis
pcoo05152  Tuberculosis
pcoo05164  Influenza A
pcoo05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:pcoo00001]
 09150 Organismal Systems
  09151 Immune system
   04612 Antigen processing and presentation
    112853268 (CIITA)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    112853268 (CIITA)
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    112853268 (CIITA)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    112853268 (CIITA)
  09163 Immune disease
   05340 Primary immunodeficiency
    112853268 (CIITA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:pcoo01001]
    112853268 (CIITA)
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:pcoo04054]
    112853268 (CIITA)
Enzymes [BR:pcoo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     112853268 (CIITA)
Protein kinases [BR:pcoo01001]
 Serine/threonine kinases: Other
  TAF1 family
   112853268 (CIITA)
Pattern recognition receptors [BR:pcoo04054]
 Cytoplasmic pattern recognition receptors
  NOD-like receptors
   112853268 (CIITA)
SSDB
Motif
Pfam: NACHT LRR_6 NLRC4_HD2 LRR_14 CARD
Other DBs
NCBI-GeneID: 112853268
NCBI-ProteinID: XP_025772610
UniProt: A0A6P6HA07
Position
Unknown
AA seq 1205 aa
MNHFQTILPRVRMLLAGHLPSQARALLDSMLERELLSREYHCALLHESDGEALARKISLT
LLEKGDPGLALLRWAWGTWQAPLAERDPDDKDRAGSGQCAAMELGPLEGGYLELLNSNAD
PLQLYHFCDQMDPAREEIELCSEPDMDTINCEQFSRLLCDMEGDEETREAYANIAELDQY
VFQDSQLEGLSKGIFIEHIGLEEVIGESVETLEEKKSQKRSFPEELPMDSKHRKLAEPLA
VPMVTGTFLVGSVSDSSALPCLSPPAVFNKEPASSQRWLEETILMPVPPSSSLLSCLSLS
AGHVQIVPTLPQGLWQISGAGTGVSGMVIYQGEVPQASQVLPSSSPAIHSLPKSPERPGS
TSPFAPSAADLPGMPEPALTSRADVTEEQMSPTRSPAAHEVSGQLPKWPERVEKFCSALR
DMYQAEPAGPEGILVEVELVRARLERSSSKSQERELATPDWAERQPARGGLAEVLLAGGD
RRRPRETQVIAVLGKAGQGKSRWAREASRAWARGQLPQYDFVFYLPCHCSDRGGDTYRLQ
DLLFSLGPRPLPVDDEVFSYVWRRPDRVLLILDASEGLEGQDGLLHSACGPVCTEPHSVR
GLLAGLFQRKLLRGCTLLLTARPRGRLAQSLSKADALFEVAGFSAEQAKTYLTRYLERAG
ATERQERALELLQGQPFLLSHCHSPALCRAVGQLSEALLELGGETELPSTLTGLYVGLLG
PAARDSPPGALAGLARLAWELGRRRRGTLLESQFPSAEARAWAVAKGLVQPAPGAAAVGL
AFSSFLLQCFLGAVWLALSSDIKDKELPQYLALTPRKKRPYDNWLEGAPRFLAGLVFQPH
ADCLGALAGPAAATLKDRKQKVLTRYLKRLQPGTLRAGQLLELLHCTRETLDAGLWQHVV
QGLPGRLSFVGTRLTPPHTYVLGSALEAAGRDFSLDLCSTGIDPPGLGSLVGLSCVTHFR
AALSDMVGLWESLQQRGEAKLLRAVEEKFTIEPFKAKSVKDVEDLGNLVQIQRTRSSSED
TAGELPAVRDLKKLEFALGPVSGPQAFPKLVRILEAFSSLQHLDLDSLSENKIGDEGVEQ
LSATFPRLKALETLNFKQNNVGEVGEVRLSREALVVSAQKLLRLNLYNNCICDMGAESLA
HVLPDMGSLRVLDVQYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFGVHEHLQQLDS
RISLK
NT seq 3618 nt   +upstreamnt  +downstreamnt
atgaaccacttccagaccatcctgcctcgggtccggatgctgctggccggccatctgccg
agccaggcccgggccctcctggacagcatgttggaaagggagctcctctccagggagtac
cactgcgctctgctccacgagtctgacggcgaggccctggccaggaagatctccttgacc
ctgctggagaaaggagacccaggcttggccctcttgaggtgggcatggggtacgtggcag
gccccgctggccgagagggaccccgacgacaaggaccgtgccggcagtgggcagtgtgcc
gccatggagttggggcctctagaaggcggctacctggagcttctcaacagcaatgctgac
cccctgcagctctatcacttctgtgaccagatggacccggctagagaagagattgagctc
tgctcagaacccgacatggacaccatcaactgcgagcagttcagcagactgttgtgtgac
atggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtac
gtgttccaggactcacaactggagggtttgagcaaaggcattttcatcgagcatatagga
ttggaagaagtgatcggcgagagtgtggagacgctggaggaaaagaaaagccagaaaaga
tccttcccagaggagctgcccatggactcgaagcacaggaagctggctgagcccctcgct
gtgcccatggtgactggcactttcctggtggggtccgtgagtgactcctcagctctgccc
tgcctgtcaccccctgctgtgttcaacaaggagccagcatccagccagaggtggctggaa
gagaccatcctgatgcctgtgcccccttccagttccttgctgagctgcctgagcctttct
gctggacacgtccagatcgtccccactctgccccaggggctctggcaaatctcaggggct
gggacaggggtatctggtatggtcatctatcaaggtgaggtgccccaggccagccaggtg
cttccttccagcagccccgccatacacagcctccccaaatccccagaacggcccggctcc
accagcccctttgccccgtctgccgctgacctccccggaatgccggaaccagctctgacc
tcccgtgcagatgtgacagaggagcagatgtcccctacccgatccccggcagctcacgag
gtctccggccagctccccaaatggcctgagcgggtggagaagttctgcagcgcccttcgg
gacatgtaccaggctgagcccgcaggcccggaaggcatcctggtggaggtggaactggtg
agggcgcggctggaaaggagcagcagcaaaagccaggagagggagctggccaccccggac
tgggcagagcggcagccggcccgcgggggcctggccgaggtgctgctggcggggggtgac
cgccggcggccgcgggagacgcaggtgatcgctgtgctgggtaaagcggggcaggggaag
agtcgctgggcccgggaagcgagccgggcctgggcccgcggccagctgccccagtacgac
ttcgtcttctacctcccctgccactgttcggaccgtgggggggacacctaccgcctgcag
gatctgctgttctccctgggcccccggccgctgccggtggacgatgaggtcttcagctac
gtctggaggaggcccgaccgggttctgctcatcctggatgcctccgagggcctcgaaggc
caagacggcctcctgcacagcgcatgtggacccgtgtgcacagagccccactccgtccgg
ggactgctggcgggcctcttccagcgtaagctgctgcggggctgcaccctgctgctcacg
gcccggccccggggccgcctggcccagagcctgagcaaggccgacgctctgttcgaggtg
gccggcttctcagccgagcaggccaagacctacctgacgcgctacttggagcgtgcaggg
gcgaccgagcgccaagagagagccctggaactcctccagggtcagcctttcctcctcagc
cactgccacagccccgctttgtgccgggctgtgggccagctgtccgaggccctcctggag
ctggggggcgagacggagctgccctccacgctcacgggactctacgtgggcctgctcggc
cctgccgcccgcgacagccccccgggggccctggcgggactggccaggctggcctgggag
ctgggccgcagacgccggggcaccttgctggagagccagttcccgtcggcggaggcgagg
gcctgggccgtggccaagggcttggtgcagcccgccccaggggccgcggcggtggggctg
gccttctccagcttccttctgcagtgcttcctgggggccgtgtggctggccctgagcagc
gacatcaaggacaaggagctgccgcagtacttggcgttgaccccgaggaagaagaggccc
tacgacaactggctggagggcgcgccgcggttcctggcggggctggttttccagccgcac
gccgactgcctcggggccctggcgggacctgctgcggccaccctgaaggacaggaagcag
aaagtgctcaccaggtacctgaagcggctgcagccggggacgctgcgggccggacagctg
ctggagctgctgcactgcacccgtgagactttggacgctgggctctggcagcacgtggtg
caggggctccccggccgcctctccttcgtgggcacccggctcacgcctccccacacctat
gtcctgggcagcgccttggaggcggcgggccgagacttctccctggacctctgcagcact
ggcattgacccccctggactggggagcctcgtgggactcagctgcgtcacccatttcagg
gctgcgctgagtgacatggtggggctgtgggagtctctacagcagcgtggggaggccaag
ctgctccgggcggtggaggagaagttcaccatcgagcctttcaaggccaagtccgtgaag
gatgtggaagatctgggcaacctcgtgcagatccagaggacaagaagttcttcagaagat
acggctggagaactccctgcggtccgggatctaaagaagctcgagttcgcgctgggcccc
gtctcaggcccccaggcttttcccaagctggtgaggatcctcgaggccttttcctccctt
cagcatctggacctggactctctgagcgagaacaagattggcgacgagggtgtcgagcag
ctgtcggccacctttccgcggctcaaggccttggagaccctcaactttaaacaaaacaat
gtgggagaggtaggggaggtcagattgagcagggaggccctcgtagtctcagcccagaag
ctacttcggctaaacctatacaacaactgcatctgtgatatgggagccgagagcctggcg
cacgtgcttccagacatggggtccctccgggtgctggatgtccagtataacaagttcaca
gccgccggggcccagcagctggccgccagcctgagaaagtgccctcacgtggagacgctg
gcgatgtggacgcccaccatcccgtttggcgtccacgaacacctacagcagctggattcg
cggatcagcctgaagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (10)   

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