GenomeNet

Database: Pfam
Entry: SymE_C
LinkDB: SymE_C
Original site: SymE_C 
#=GF ID   SymE_C
#=GF AC   PF30450.1
#=GF DE   Endoribonuclease SymE C-terminal domain
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   TED:P39394_TED02
#=GF GA   27.00 27.00;
#=GF TC   27.80 48.10;
#=GF NC   25.70 21.20;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 8 -Z 90746521 -E 1000 HMM pfamseq
#=GF TP   Domain
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This entry represents the C-terminal domain of endoribonuclease
#=GF CC   SymE, found in bacteria. SymE is a toxin component of a
#=GF CC   toxin-antitoxin system that cleaves RNA, inhibiting protein
#=GF CC   synthesis under stress conditions.
#=GF SQ   33
#=GS SYME_ECO27/73-112        AC B7UQX7.1
#=GS A0A089Q0S1_9ENTR/61-100  AC A0A089Q0S1.1
#=GS A0A2N5ERZ3_9GAMM/80-119  AC A0A2N5ERZ3.1
#=GS A0A7M2V7V6_9ENTR/72-107  AC A0A7M2V7V6.1
#=GS SYME_SHIFL/75-113        AC Q83II5.1
#=GS SYME_ECO55/73-113        AC B7LDZ6.1
#=GS A0A4P8YKB1_9ENTR/30-69   AC A0A4P8YKB1.1
#=GS A0A4R3YJ68_9GAMM/72-107  AC A0A4R3YJ68.1
#=GS SYME_SALTY/76-110        AC Q8ZJY9.1
#=GS A0A443IE03_9GAMM/80-118  AC A0A443IE03.1
#=GS D4GL33_PANAM/2-42        AC D4GL33.1
#=GS A0A0Q4MKV9_9GAMM/72-103  AC A0A0Q4MKV9.1
#=GS A7MG71_CROS8/78-117      AC A7MG71.1
#=GS A0A427K2A4_9GAMM/64-104  AC A0A427K2A4.1
#=GS SYME_ECOL6/73-113        AC Q8FA88.1
#=GS A0A2Z5XV09_ECO57/73-113  AC A0A2Z5XV09.1
#=GS A0A4P8YJH1_9ENTR/81-118  AC A0A4P8YJH1.1
#=GS A0A0Q4NMI1_9GAMM/73-106  AC A0A0Q4NMI1.1
#=GS A0A4R3YFX0_9GAMM/15-54   AC A0A4R3YFX0.1
#=GS A0A090UWC5_PSEVU/70-108  AC A0A090UWC5.1
#=GS A0A3R9AZ17_9GAMM/74-112  AC A0A3R9AZ17.1
#=GS A0A4P8YHZ5_9ENTR/81-118  AC A0A4P8YHZ5.1
#=GS B7MMN6_ECO45/93-131      AC B7MMN6.1
#=GS SYME_ECOLI/73-113        AC P39394.2
#=GS A0A0H3ER15_ECO8N/73-113  AC A0A0H3ER15.1
#=GS A0A0U5LAM2_9GAMM/71-108  AC A0A0U5LAM2.1
#=GS SYME_ECOK1/73-113        AC A1AJL8.2
#=GS SYME_ECO57/73-113        AC Q8X485.1
#=GS A0A427K2A9_9GAMM/33-74   AC A0A427K2A9.1
#=GS A0A443IEW5_9GAMM/86-121  AC A0A443IEW5.1
#=GS L0M968_ENTBF/73-113      AC L0M968.1
#=GS A0A848MJZ7_9GAMM/76-113  AC A0A848MJZ7.1
#=GS D4GL30_PANAM/77-115      AC D4GL30.1
SYME_ECO27/73-112                   ..ppaAE..ESELMQSLRQVCK.LSARKQKQVQEFIGVISSKTPR-...
A0A089Q0S1_9ENTR/61-100             ..ppv-E..EPEIMQTLRKVCK.LSTRRQKQVKAFIEDVIAPKPR-g..
A0A2N5ERZ3_9GAMM/80-119             ...qe-E.aETELMQALRRVEK.LSKRKQKQVWAFIDGVSGSCRRV...
A0A7M2V7V6_9ENTR/72-107             ....kEP..EPELLASLRVVEK.LSARKQKQVREFIGVVSG-----rt.
SYME_SHIFL/75-113                   ....aAE..ESELMQSLRKVCK.LSARKQRQVQEFIGVITGKQKV-a..
SYME_ECO55/73-113                   .ppaa-A..ESELMQSLRQVCK.LSARKQRQVQEFIGVIAGKQKV-a..
A0A4P8YKB1_9ENTR/30-69              epvqg--..-PELMQALRKICK.LSARKQQQVTDLIEVISRPQKQN...
A0A4R3YJ68_9GAMM/72-107             .....PP..EPEIMQTLRKVCK.FSARKQRQVTELIEVISKPQR--...
SYME_SALTY/76-110                   .....PE..ESELMQSLRQVSK.LSARKQKQVQAFIDVMAGSK---...
A0A443IE03_9GAMM/80-118             ....qEP..EPALMQALKKVSK.LSARKQRQVTDLIEVISKPQRQ-s..
D4GL33_PANAM/2-42                   ...pp-P.aEPEVLAQLRKACKnISARKQEQIAAFITAVITPEKR-l..
A0A0Q4MKV9_9GAMM/72-103             ...re-H..EPQLMKSLRKVCK.FSGRRQRQVEAFIGA--------m..
A7MG71_CROS8/78-117                 ...pePE..DPPLLKSLRRVCK.LSVRKQQQVQEFIEVIAGKRKK-r..
A0A427K2A4_9GAMM/64-104             .....PEtaEPKVVVALHKACKkLSARKQRQIAEFIQVIATPQKRP...
SYME_ECOL6/73-113                   .ppaa-A..ESELMQSLRQVCK.LSARKQRQVQEFIGVIAGKQKV-a..
A0A2Z5XV09_ECO57/73-113             .ppaa-A..ESELMQSLRQVCK.LSARKQRQVQEFIGVIAGKQKV-a..
A0A4P8YJH1_9ENTR/81-118             .....PP..EPEIMQALRKAGK.LSARKQRQITDLIEAISRPQKQN...
A0A0Q4NMI1_9GAMM/73-106             .....EP..EPQLMKSLRKVCK.FSGRKQQQVEAFIGAMAGK----...
A0A4R3YFX0_9GAMM/15-54              ...ppPP..EPEIMQTLRKVCK.LSGRKQQQILEFIEVITAKKPP-v..
A0A090UWC5_PSEVU/70-108             ....kPV..EEELMQSVRKISK.LSPRKQRQVQDYIDLVAAKRRV-n..
A0A3R9AZ17_9GAMM/74-112             ...pePQ..EPELMKSLRKVCK.FSARKQRQVQEFIEVISGK----pir
A0A4P8YHZ5_9ENTR/81-118             .....PS..EPEIMQALRKVCK.LSTRKQQQIADLIEVISKPQRQN...
B7MMN6_ECO45/93-131                 ...paAE..EGELMQSLRQVCK.LSARKQRQVQDFIGVISSKTPR-...
SYME_ECOLI/73-113                   ..ppaAE..ESELMQSLRQVCK.LSARKQKQVQAFIGVIAGKQKV-a..
A0A0H3ER15_ECO8N/73-113             .ppaa-A..ESELMQSLRQVCK.LSARKQRQVQEFIGVIAGKQKV-a..
A0A0U5LAM2_9GAMM/71-108             .....PP..ESEIMQTLSKVCK.PSARKQRQVTELIEVISKPKTRA...
SYME_ECOK1/73-113                   ..ppaAE..ESELMQSLRQVCK.LSARKQRQVQEFIGVIAGKQKV-a..
SYME_ECO57/73-113                   .ppaa-A..ESELMQSLRQVCK.LSARKQRQVQEFIGVIAGKQKV-a..
A0A427K2A9_9GAMM/33-74              ..pelPT..EPEVVTTLRKACKkLSARKQRQIEEFIQVLATLQKRP...
A0A443IEW5_9GAMM/86-121             .....PP..EPEIMQTLRKVCK.LSARKQRQVTDLIEVISKPQR--...
L0M968_ENTBF/73-113                 ..ppaAE..ESELMQSLRRVCK.LSARKQKQVQEFIGVITGKTRK-v..
A0A848MJZ7_9GAMM/76-113             .....PE..EPEIMHALKKACK.LSGRRQQQIVEFITLIATPKKRP...
D4GL30_PANAM/77-115                 ....qPS..EPEIMQMLKKVCK.LSARKQKQIVEFITVIATPQKRP...
#=GC seq_cons                       ....tst..EsELMQoLR+VCK.LSARKQ+QVp-FIsVIuu.p+h....
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