KEGG   Panicum hallii (Hall's panicgrass): 112877166
Entry
112877166         CDS       T07366                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03013  Nucleocytoplasmic transport
phai03015  mRNA surveillance pathway
phai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112877166
  09122 Translation
   03013 Nucleocytoplasmic transport
    112877166
   03015 mRNA surveillance pathway
    112877166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phai03019]
    112877166
   03041 Spliceosome [BR:phai03041]
    112877166
Messenger RNA biogenesis [BR:phai03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     112877166
Spliceosome [BR:phai03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    112877166
SSDB
Motif
Pfam: RRM_1 DUF5721 Peptidase_C37
Other DBs
NCBI-GeneID: 112877166
NCBI-ProteinID: XP_025797170
Position
1:complement(49397476..49400967)
AA seq 243 aa
MASLFKDPNKLSAYRDRRFPGTQEEYEAALQASTTVYIGNMSFYTTEEQAYELFSRAGEI
KKIIMGLDKNSKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKMVQKELEAQRELVDYGGSFQPNAPPPYERGERKRG
YGDSYRNDRGDYQRKRYRNDDRSAAPEGSKRAPDSDQAEKNPRFREKGDSDEEDDDYDKR
RRR
NT seq 732 nt   +upstreamnt  +downstreamnt
atggcgtccctcttcaaggacccgaacaagctgtcggcgtacagggaccggcggtttccg
gggacgcaggaggagtacgaggcggcgctgcaggcgtcgacaacggtgtacatcgggaac
atgtccttctacaccacggaggagcaggcctacgagctcttctcccgcgccggcgagatc
aagaagatcatcatggggctcgacaagaactccaagaccccctgcggcttctgctttgta
ctgtactactccagggaggatgctgaagatgctgtcaaatatattagcggaacaatgctt
gacgatcgtccaatccgtgttgattttgattggggctttgaagaaggcaggcagtggggc
cgtggacggagtggcggtcaagtcagagatgagtaccgtacagattatgatccaggaaga
ggtggttatggtaagatggttcagaaggagctagaagcacaaagagagttagttgactat
ggtggatcttttcaaccaaatgcaccaccaccatatgagagaggtgaacgcaagagagga
tatggagactcttacaggaatgacagaggagattaccaacggaagcgctaccggaatgat
gatcgatctgctgcgccagaggggtccaagagagcgcctgactctgatcaagcggagaag
aatcctaggttccgagagaaaggtgactctgatgaggaagatgacgactacgacaagagg
cgacgtcgctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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