KEGG   Paenibacillus sp. JDR-2: Pjdr2_3893
Entry
Pjdr2_3893        CDS       T00977                                 
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
  KO
K01929  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
Organism
pjd  Paenibacillus sp. JDR-2
Pathway
pjd00300  Lysine biosynthesis
pjd00550  Peptidoglycan biosynthesis
pjd01100  Metabolic pathways
pjd01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pjd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Pjdr2_3893
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Pjdr2_3893
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Pjdr2_3893
Enzymes [BR:pjd01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     Pjdr2_3893
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: ACT02523
Position
complement(4438621..4440000)
AA seq 459 aa
MCGARAYKGEPVRIAGVSTDTRSIQPGQLFVPLVGENFDGHSYVAQALQQGAAAALWETK
RELPQELADAPLLFVRDTLKALQQLATSYREELYVRVIGITGSNGKTTTKDMVAAVLGTA
YKVHKTAGNLNNHIGLPLTVLQLDEETDAAVLEMGMSGFGEIELLTNIARPDVAVITNIG
DAHLLQLGSREGIAKAKLEIAHGLHSGGILLYNGDEPLLAAELAGMSLPEGTQLQTFGLG
ESNDWSAADIEVGAVSSAFAVKRKGQDTVSAPYTIPVPGQHNVSNALAAIAIGRRFGISE
ENIRNGLIGLELTGMRIQPVKAHNGAMILNDAYNANPTAVRAAIDLVGQLSGFRRKWIVL
GDMRELGPEEESLHFETGAYITPDKADAVITFGPLSEHTSAGALSQFPAEAKGTAIVHFD
DKGKLGEWLREQVEPQDLVLVKGSRGVRMEQIVQTLEAR
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtgcggcgcaagagcctataaaggcgaacccgtccggattgccggcgtcagcacggat
acgcgcagcattcagccgggtcagctgttcgttccgcttgtcggagagaactttgacggt
cacagctatgtggcacaggcgcttcagcaaggggctgcagccgccttgtgggagacgaag
cgtgaattgccgcaggagctggcagacgcgcctctattgtttgtaagggatacgctgaag
gcgctgcagcagctggcaacttcctacagggaagagctgtatgtccgtgttatcggcatt
acgggcagcaatggcaaaacaacaacaaaagatatggttgctgccgttcttggaacagct
tataaagttcacaagacggcaggcaatctgaataatcatattggcctgccgctaaccgtt
ctccagcttgacgaggaaacggatgcggcagtccttgagatgggcatgagcggctttggc
gagattgagctgcttacgaatattgcccgtccggatgttgcggtgattacgaatatcggc
gatgcccacctgcttcagctaggctcccgcgaagggatcgcgaaagcaaagctggagatt
gcgcatgggcttcattcgggaggtattcttctctataacggcgatgaaccgctgcttgcg
gcagaacttgccggaatgagcttgcctgaaggcacgcagcttcagacctttggccttggg
gagtccaacgactggtcggcggctgatatcgaggttggcgccgtatcttctgcctttgcc
gttaagcgcaaagggcaggataccgtatcagcgccttacaccataccggtacccggccag
cataacgtcagcaacgcgcttgcggccatcgcgattggacgccggttcggcatttcggag
gagaatatccgaaatggcttgatcggtcttgaattgaccggcatgagaatccagccggtg
aaggcgcataacggcgcaatgattctgaatgatgcgtacaacgccaatccgaccgccgtg
cgcgcagcgattgatctagtcggccagctgagcggcttccggcgcaaatggatcgttcta
ggcgatatgcgggagcttggtccggaggaagaatcgcttcacttcgagacgggggcttat
attacacctgacaaggctgatgccgtcattacgttcggaccattgtcggagcatacgtcg
gcaggggctttgtcgcaattcccggcggaagcaaagggaacggcgattgtacattttgat
gataaagggaagcttggagaatggttgagagagcaagtagagcctcaggatctcgtcctg
gtcaaaggctcgcgcggtgtgcgcatggaacagattgtccaaactttggaagcgaggtga

  All links  
Gene (12)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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