KEGG   Pichia kudriavzevii: C5L36_0B08890
Entry
C5L36_0B08890     CDS       T06133                                 
Name
(RefSeq) uncharacterized protein
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
pkz  Pichia kudriavzevii
Pathway
pkz03022  Basal transcription factors
pkz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pkz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    C5L36_0B08890
  09124 Replication and repair
   03420 Nucleotide excision repair
    C5L36_0B08890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pkz03021]
    C5L36_0B08890
   03400 DNA repair and recombination proteins [BR:pkz03400]
    C5L36_0B08890
Enzymes [BR:pkz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C5L36_0B08890
Transcription machinery [BR:pkz03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     C5L36_0B08890
DNA repair and recombination proteins [BR:pkz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     C5L36_0B08890
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD SBP_bac_6 AAA_34 AAA_22
Other DBs
NCBI-GeneID: 40383412
NCBI-ProteinID: XP_029321124
UniProt: A0A2U9R2U8
Position
2:complement(1894593..1897106)
AA seq 837 aa
MTSVGAAEALQATDKLENLFSDNSSADDTDLDQEQSVTPPAKRRRKLPQKTQEAIDQIKE
TNNDEEYEEDELLKIRLDRPSDFIPDSVSHIFANNDFSYLRLKPDHPARPIWISPSDGKI
YLESFSPLSEQAQDFLVTIAEPVSRPNFMHEYKITTHSLYAAVSVGLETDDIISVLNRLS
KVPVATSVVDFIKAATHSYGKVKLVLKHNRYFVESSSAEILRMLLKDDVIGKLRLVRTDE
QDTDALVQTQAPTQGDLVIPGTKKNGKSEDKVQQGDDAAGDDSKGADEVENIYADVIAEA
EDENADDTVHSFEVAAENVETVKKRCQEIDYPMLEEYDFRNDTRNPDLEIDLKPSTQIRP
YQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLCTSSVSVMQWRQQF
LQWCTIQPENVAVFTSENKQMFRGESGLVVSTYSMVANTRNRSHDSQKVMDFLTSREWGF
IILDEVHVVPAAMFRRVVTALATHAKLGLTATLVREDEKISDLNFLIGPKMYEANWMELS
QKGHIAKVQCAEVWCPMTSEFYQEYLRENARKRMLLYIMNPTKFQACQFLIQYHESRGDK
IIVFSDNVYALQEYALKLGKPFIYGSTPQQERMNILQNFQYNEKVNTIFLSKVGDTSIDL
PEATCLIQISSHYGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYYSTKRQA
FLVDQGYAFKIITHLHGMEDLPNLAYASPKERRELLQEVLLKNEEAAGVELGEDADNLIG
HGVSRKLKSSSTKNQASMAGLAGGEDMAYVEYSRSKKNDEISHHPFFEKNYYRRRKR
NT seq 2514 nt   +upstreamnt  +downstreamnt
atgacatccgtaggtgcagcagaagcactgcaagccaccgataaacttgaaaatttattc
tcagacaacagttctgcagacgacacagatttggatcaagagcagagtgttacgccaccg
gcaaaacgtagaaggaaactgccacaaaaaacacaggaagctattgatcaaatcaaggag
acaaacaacgacgaagaatatgaagaagatgaattgttaaagatcagattagacaggcca
agtgattttatccctgattctgtctctcatatcttcgcaaacaatgatttctcgtaccta
aggttgaaacctgatcacccagcacgtccaatttggattagtccttcagatggtaagatc
tatttggaaagtttttctccgttgtccgagcaagcccaggacttcttagttacaattgca
gaacctgttagcagaccaaattttatgcatgaatataaaatcactacacattcattatac
gctgctgtttctgttggtttagagactgatgatattatatcggttttgaataggttgtcg
aaagtgcctgtggcaacttcagtcgttgatttcattaaagcggctactcactcctatggt
aaggtcaaattggttttaaagcacaatagatattttgtagaatcttcttctgccgaaatt
ttgagaatgttattgaaggatgatgttattggtaagctgagattagtacgcactgatgaa
caagatacggatgccttggttcaaactcaagccccaactcaaggagatttagtcatccct
ggaacgaaaaaaaatgggaagtctgaagacaaagtacaacaaggggacgatgcagctggt
gacgattccaaaggagccgatgaagttgaaaatatttatgctgacgttattgcagaggcg
gaggacgaaaatgccgatgatacagttcattcttttgaggttgcggccgaaaatgtcgaa
actgtcaagaaaagatgtcaagagattgactacccaatgctagaggaatacgattttagg
aacgatacacgtaaccctgatcttgagatagatttaaagccatccacccagattagaccg
taccaagagaaatcgttgagtaaaatgtttggtaacggccgtgcgaggtctggtatcatc
gtgttaccatgtggtgctggtaaaaccttagttggaattactgcagcatgtaccattaga
aaatctgtcattgttttatgtacatcatcggtttctgtgatgcaatggagacaacagttt
ttgcaatggtgtactattcaaccagaaaatgttgccgttttcacttcagagaataagcaa
atgtttcgaggtgaatctggtttggtggtgtcgacatactcaatggtagcaaatactaga
aacaggtcgcatgattcccaaaaagtgatggatttcttaacttctagggagtggggcttt
atcattctggacgaggtccatgttgttcctgcagctatgtttagaagggttgtcactgcg
ctagccacccatgcgaagctagggttaactgctaccttagttagagaggatgaaaaaatt
tcagatcttaattttcttattggaccaaaaatgtatgaagcaaactggatggagttatcg
caaaaggggcatattgccaaagtccaatgtgctgaagtttggtgccctatgacaagtgaa
ttttatcaggaatatctaagggagaacgctcggaaaagaatgctattgtacatcatgaat
cctactaaattccaagcatgtcaattcttgatacagtatcatgaaagcaggggagataaa
atcattgttttttcagacaatgtctatgctttacaagagtacgctttgaagctaggcaaa
cctttcatttatggctcaacaccacaacaagaaagaatgaacattttgcagaacttccag
tataatgaaaaggtcaacactattttcctatcaaaggtgggtgatacatctattgactta
cctgaagcaacatgcttaattcagatttcctcacattatggttcaagaagacaggaggca
caacgtttgggtcgtatcttacgtgccaaacgtagaaatgatgaaggttttaatgctttt
ttttattctttagtttccaaagatacacaagagatgtattattccaccaagcgtcaggct
ttccttgttgaccaaggttatgcatttaagattatcacgcatttgcatggcatggaagat
ttaccaaaccttgcatatgcatctcccaaagaacgtcgggagctattacaagaagtccta
ttgaagaacgaggaggcggcaggtgtcgagctcggggaagatgctgataatttaattgga
catggggtctctagaaaactcaaatcaagttctaccaaaaaccaagcgtccatggctggt
ttggctggtggtgaagatatggcttatgttgaatattctagaagtaagaaaaatgatgaa
atttcacaccatccattttttgaaaagaactactacagaagaagaaaaaggtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (14)   

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