KEGG   Pseudomonas marginalis: U0037_01000
Entry
U0037_01000       CDS       T10241                                 
Name
(GenBank) Crp/Fnr family transcriptional regulator
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pmab  Pseudomonas marginalis
Pathway
pmab02020  Two-component system
pmab02024  Quorum sensing
pmab02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pmab00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    U0037_01000
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    U0037_01000
   02025 Biofilm formation - Pseudomonas aeruginosa
    U0037_01000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmab03000]
    U0037_01000
Transcription factors [BR:pmab03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    U0037_01000
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 MarR_2 HTH_24 MarR HTH_3 Crp GntR HTH_11 HTH_36 HTH_29 HTH_IclR HTH_28 WHD_RecQ_mid_bact Sigma70_r4_2 Sigma70_r4 Xre-like-HTH HTH_41 HHH_XRCC3_RpoA HTH_23 TrmB HTH_DeoR NirdL-like_HTH HVO_A0261_N DUF1670 DUF3565 HTH_AsnC-type HTH_ParB wHTH-PRTase_assc
Other DBs
NCBI-ProteinID: WQD72565
UniProt: A0ACD4XTN0
Position
217565..218251
AA seq 228 aa
MDADKWHARLGCGHWFRHLPSDLQRSLLAAARPRSLTAGQLLFKRGDPPCGVYAVLEGGV
RISAVNAQGKEAVLSLVETPYWFGEICLFDGLPRTHDALAMGPCTLLQVPQAAMLGILER
HPPYWRDVALLMSHKLRLSLINIEQMSLMPALARLAHRLLMIAEGYGEIEQARRVLHLPQ
EDLAAMLGLSRQTINSLLKTLEQQGVIELSYGAIEILDFNGLRLSAGL
NT seq 687 nt   +upstreamnt  +downstreamnt
atggacgcagacaaatggcacgcccggttgggctgtggccactggttccgtcatctgcct
tcagacttgcagcgtagcttgctggcagcggcccggccacgctcgctgacagcaggacag
ttgctgttcaagcgcggtgatcccccgtgcggtgtgtatgccgtgctggaaggtggggtg
cgtatcagtgcagtgaatgcccagggcaaggaagcggtattgagcctggttgagacgcct
tactggttcggcgaaatctgcctgttcgatggcctgccgcgtacccatgatgcccttgcc
atggggccatgcacattactgcaggtgccgcaggcggcaatgctcggcatcctggagcgg
catccgccgtattggcgcgatgtagccctgctgatgagccacaaactgcgcctgtcattg
atcaatatcgagcagatgagcctgatgcccgcgttggcgcggctggcccatcggctgctg
atgatcgctgaaggctacggggagatagaacaggcccgccgcgtgttgcacttgcctcag
gaggatcttgcggcaatgctgggcctgtcgcgccagaccattaacagtctgctcaagacg
ctggagcaacagggcgtcattgagctcagttacggcgcgattgagatactcgatttcaat
ggcctgcggctgtctgcgggcctatga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (29)   
   Pfam (29)   
All databases (31)   

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