KEGG   Panulirus ornatus (ornate spiny lobster): 139750712
Entry
139750712         CDS       T10834                                 
Symbol
Prp19
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
porn  Panulirus ornatus (ornate spiny lobster)
Pathway
porn03040  Spliceosome
porn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:porn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139750712 (Prp19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139750712 (Prp19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:porn03041]
    139750712 (Prp19)
   04121 Ubiquitin system [BR:porn04121]
    139750712 (Prp19)
   03400 DNA repair and recombination proteins [BR:porn03400]
    139750712 (Prp19)
Enzymes [BR:porn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139750712 (Prp19)
Spliceosome [BR:porn03041]
 Complex B
  Other components
   Prp19 complex
    139750712 (Prp19)
 Complex C
   Prp19-CDC5 complex
    139750712 (Prp19)
Ubiquitin system [BR:porn04121]
 Ubiquitin ligases (E3)
  U-box type E3
   139750712 (Prp19)
DNA repair and recombination proteins [BR:porn03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    139750712 (Prp19)
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Prp19 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_EIPR1 PEP5_VPS11_N Beta-prop_RIG_2nd Beta-prop_SPT8 WDR90_beta-prop_4th U-box Beta-prop_DCAF4 eIF2A Beta-prop_IFT122_1st Ge1_WD40 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_WDR75_2nd Cytochrom_D1 ATG16 PUMA_CC
Other DBs
NCBI-GeneID: 139750712
NCBI-ProteinID: XP_071521487
Position
10:91191..332945
AA seq 505 aa
MSLICALSSEVPDQPVVSPLSGAVFERRLLEKYIAENGTDPITNKELTVDQLIELKVPPV
AKPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAATRVIARL
NKEVTAAREALATLKPQAGIAPAAPAGPTIAVTAETGGSADVPSEGAGLTEEVVTRLQDT
ATVLTQERKRRGRTVPEGLTPAEQIRGFTTLASHPGLHSASVPGILAVDVHQKDTSKIVT
GGSDKNATVFNKDTEQVVAILKGHTKKVSCVVYHPTEDTIITASPDTQIRVWNVGTSQTL
QLIRAHDGPVTGLSLHATGDYLLSASRDHNWAFSDIRSGRVLCKVSDTSASSPLTAAQFH
PDGLILGTGTQDATIKIWDLKERSNVANFPGHSGAISSIAFSENGYYLATAAEDSTVKLW
DLRKLKNFKTIQLDEGYEVMDLCFDQSGTYLAVAGTDVRVYLCKQWNDLRVFNDHTAMAT
GVRFGSNASYLASTSMDRTLKIYGP
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtctctcatatgtgcactcagcagtgaggtaccagaccaaccagtggtttcaccactg
tcgggtgctgtctttgagcgtcggcttctggaaaaatacattgcagaaaatggcactgat
cctataactaacaaggaattaacggtagaccaactgattgaactaaaagtaccgccagtg
gcaaaaccaaagcctccaagtgccactagtattcctgccatcctcaaggctcttcaggat
gaatgggatgcagtcatgcttcattcctttacacttcgccaacaacttcagactgctcgc
caagaactaagccatgctttgtatcagcatgatgctgccactcgtgtgattgcccgtcta
aataaggaggtaactgctgctcgagaggccctggcaacactcaagccacaggctgggatt
gcacctgctgctccagctggacctacgattgctgttacagcagaaactggtggttctgca
gatgtaccaagtgagggtgcagggctgacagaagaagttgtaactcgcttgcaggatact
gctactgttttaacacaggaacgtaaacgacgtggtcgcactgtgcctgagggtctcact
ccagcagaacagataaggggcttcaccactcttgcttctcatcctggtttacacagtgca
tcagtacctggtatcttggctgttgatgtacatcagaaagacactagcaagattgtcact
ggtggcagtgataagaatgcaactgtcttcaataaggatactgaacaggttgttgctatc
ctgaaaggtcacacaaagaaggtatcatgtgtggtgtaccacccaacagaggacacaatt
ataactgcatcacccgatactcagatccgtgtttggaatgtgggcacttctcagacgtta
cagctaattcgtgctcatgatggacctgtcactggattatctcttcatgctactggtgac
taccttctttcagcatcccgtgatcataactgggcattttcagatatacgaagtggccgt
gtgttgtgcaaggtgagtgatacctctgccagttcacccttgactgctgcccagttccac
cctgatggtcttatactcggcacaggaactcaggatgccacaatcaagatttgggattta
aaggaacgttctaatgttgcaaatttcccaggtcacagtggagccataagttccattgcc
tttagtgagaatggttattaccttgcaacagcagcagaagattccactgtaaagctttgg
gatctgcgtaaactcaagaactttaaaaccatccagttagatgagggatatgaagtaatg
gacctttgctttgaccagtcgggtacatacttagctgtagcagggacagatgttagagtg
tatctctgtaaacagtggaatgacttgagagtattcaatgatcacacagctatggctact
ggagttcggtttggatcaaatgcctcctacttggcatctacatcaatggatcgaacccta
aagatctatggaccttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (39)   
   Pfam (39)   
All databases (43)   

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