KEGG T10834: 139764330

Panulirus ornatus (ornate spiny lobster): 139764330

Entry

139764330         CDS       T10834

Name

(RefSeq) DNA mismatch repair protein Msh3-like

K08736

DNA mismatch repair protein MSH3

Organism

porn Panulirus ornatus (ornate spiny lobster)

Pathway

porn03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:porn00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    139764330
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:porn03400]
    139764330
DNA repair and recombination proteins [BR:porn03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     139764330

SSDB

Motif

Pfam:

MutS_V MutS_III MutS_I MutS_II MutS_IV 3HCDH_N CtIP_N DUF1931

Other DBs

NCBI-GeneID:

139764330

NCBI-ProteinID:

XP_071546945

Position

49:complement(4156009..4179223)

AA seq 1060 aa
MSASGAKKQLTISKFFAPVRKSGKAAYETDDEKQNNSNKITEISISPALKRTKRSDPENV
KSKKSSCKRSKHEDDKNGIFKTSDINVDCSPRKACLTPWTKNRLQAFSAETATEDGDDIM
EVHQDHPPSRTFKKVNQNEVRSKLDNFRSDSTTSSQQAESLPVKSGPMKALPGMKLTPLE
QQVVSIKNENPDVIIFVECGYKYRFFGKDAEIASKELNIIAHLDHSFMTASIPTHRLHVH
VRRLVAKGYKVGVVKQTETAALKAAGSNKNAPFGRELTALYTRSTLIGEDVTPAAGGEAV
GDGDITEGATAMLLVVYEGNSSSGKDGTIGISIIAIQPSTGDIVYDVFDDSSMRTELWCH
LDHIQPVEAIVPANISDLTVKAITAATTKNEDCIRIERLNVAEFDYSQSLKRLCELFEDE
EEKIKHISGLPPNVISCLGATLIYLAEFKLDRIIKMAGSIHKYSSSSHHMKLSGATLRNL
EVLTNAVDGETKGSLLWALDKTQTKFGSRLLRRWIVQPLLSIDEITERQDMIEELMKSDA
PILNKLKNVLYKLPDFERALTTIFHKKCSPHEFWFAVQGLSRVHSELSRVGGNIEDHIKT
SGLLALLRDVVDGLSTIDSFANNINEASAREGKKTSLFRDYSEFPRVIQRQQEITDVKQQ
LDDLKPEIARILKLLSFSYTTVSGLEYLVEVKNSHLNAVPKNWAKISSTKACCRFRSPEI
ENFYAKLQRLREQLQADCHEAWLAVLESFSNHYQQHRQAVRCLASLDALISLANVAKAQG
YCRPQIFESKSGRGMLKILQGRHPIVSQLKLADEQYVANDTHLEVDGQRVMLVTGPNMGG
KSCYMRQVALIALMAQTGSYVPADSVEMSLLDAIYTRMGAADEIYTGRSTFMVEVGETAD
IMHEATTNSLVILDELGRGTSTHDGVAIAMGALDFFLNQVKCLTIFVTHYLPLTEFEELY
PNQVGNFHMSFIVNEEEGEGVDIVTFLYQLTSGSAGQSYGLNVARLAQVPHPVLLKASEK
SKHLEQICRMRRKGKETFQSLFKSSENAREVLQEFLSANS

NT seq 3183 nt +upstreamnt +downstreamnt
atgtctgcctcaggtgccaagaagcagcttactatatcaaagttctttgcaccagtcagg
aaaagtggaaaagctgcttatgagactgatgatgaaaagcaaaataattccaacaaaatt
actgagatcagtatatcaccggctttaaagcgaacaaagaggagtgatccagaaaatgta
aaatcaaagaaatcctcatgcaaacgatctaaacatgaagatgacaagaatggcattttt
aaaacttctgatattaatgttgattgtagccccaggaaagcatgtctcacaccatggacc
aagaataggcttcaggcttttagtgcagaaacagcaacagaggatggagatgacataatg
gaagtacatcaggaccatcctccatcaagaacatttaagaaggtcaaccaaaatgaggtc
aggagcaagttggataatttcaggagtgatagcactaccagcagccagcaagcagagtct
ctaccagtcaagtcagggcctatgaaagctcttcctggaatgaagctcactcctttagaa
caacaagttgtctctataaagaatgaaaatccggatgtgattatttttgtggaatgtgga
tacaaatacaggtttttcggaaaagatgctgagattgcatccaaggaattaaacatcatt
gctcacttggaccatagttttatgactgcaagcattcccacacatcgcctccatgttcat
gtacgaagacttgttgcaaaaggttacaaagttggggttgtaaagcaaactgaaactgct
gctctgaaggcagctggcagtaacaagaatgcaccttttggtcgtgaactcacagcgctc
tatactcgttctactctcattggtgaggatgtaacacctgcagctggtggggaagctgtt
ggtgatggagatatcactgaaggagccacagcaatgcttctggtagtgtacgaaggcaat
agttcttcaggaaaggatggaactattggtatttcaataattgccatccaaccaagcact
ggagatattgtatatgatgtctttgatgactcctccatgagaacagaactttggtgtcat
ttagatcacattcagccagttgaagctatagtacctgcaaatatatcagatctcactgta
aaagctattacagcagccacgacaaagaatgaggattgtattcgaattgaacgattgaat
gtggcagagtttgattactctcagtctttgaaacgtttatgtgaattatttgaggatgaa
gaagagaagataaagcacatatcagggcttccaccaaatgtgataagctgccttggggct
acccttatatatcttgcagaattcaaattggatcgtataataaaaatggctggatcaatt
cataagtatagttcaagcagtcaccacatgaaactttctggtgccactctgcggaactta
gaagtgttgacgaatgcagtggatggtgagacaaaaggcagtttgttgtgggcacttgat
aaaacacagactaaatttgggtccagactccttcgacgctggatagttcagcctttattg
agcatagatgaaataactgaacgtcaagatatgattgaggagctgatgaaatctgatgca
ccaattttgaataaactgaagaatgtcctttacaaactgccagattttgagagagctcta
acaaccatttttcacaaaaagtgcagtcctcatgaattttggttcgcagtgcaaggatta
agtcgtgtgcattctgagctttctagagtcggtggcaatatagaagaccatataaaaaca
tctggtctgctagctcttcttcgggacgttgtggatggtttatctactattgattcattt
gcaaacaatattaatgaagctagtgccagagaaggcaagaagacaagcctcttcagggat
tattctgaattccccagagttatacaaagacaacaagaaataactgatgtgaaacaacaa
ctagatgatcttaaaccagagattgccaggatacttaaacttctaagcttcagttacaca
acagtatcagggcttgaataccttgttgaagtaaagaattctcacttaaatgcagttccg
aagaactgggccaaaattagctcgacaaaagcttgttgcagatttaggtcacctgagatt
gaaaatttttacgctaaattacagcggctgcgagaacaattacaagctgattgtcacgag
gcatggcttgcagttttagaatcattctccaatcactatcaacagcatcgccaggctgta
agatgcctcgcttctcttgatgctctgatttcacttgcaaatgttgcaaaagctcagggt
tactgccgacctcaaatttttgaaagcaaaagtggtagagggatgctgaaaattctccaa
gggcgacatccaattgtcagtcagttaaaactggcggatgaacagtatgttgcaaatgat
actcatttagaggttgatggtcagcgggtaatgcttgtgacagggccaaatatgggtgga
aagtcatgctatatgcggcaggtggcactcatagccctcatggctcagacagggagctat
gttcctgcagattcagtagagatgtcacttttggatgcaatatataccagaatgggtgct
gcagatgagatctacactggacgcagcacattcatggttgaagttggagaaactgcagac
atcatgcatgaagcaacaactaattcactagtgatcttagatgaactgggaagaggtact
tctacgcacgatggtgtagctattgccatgggagcgcttgacttcttcctcaatcaggtg
aagtgtctcacaatatttgtgacccattacttgccccttactgaatttgaggagctgtac
ccaaaccaagtgggcaacttccatatgtccttcattgtgaatgaggaagaaggtgaaggt
gttgacattgtaaccttcctgtatcaactgacatctggaagtgcgggtcagagttatggg
ttaaatgtagcacgtcttgctcaggtgccacacccagtactcttgaaagcttcagaaaaa
tcaaaacacttggaacagatctgcagaatgaggagaaagggaaaagaaacattccagtca
ctcttcaaatccagtgagaatgccagagaagtcttgcaagaatttcttagtgcaaactct
tga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (12)   

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