KEGG   Komagataella phaffii: PAS_chr3_0818
Entry
PAS_chr3_0818     CDS       T01092                                 
Name
(RefSeq) ATP-dependent RNA helicase of the DEAD box family
  KO
K14779  ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
Organism
ppa  Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppa03009]
    PAS_chr3_0818
Enzymes [BR:ppa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PAS_chr3_0818
Ribosome biogenesis [BR:ppa03009]
 Eukaryotic type
  90S particles
   Helicases
    PAS_chr3_0818
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA Utp25_C XM1_gp53_minor_capsid
Other DBs
NCBI-GeneID: 8200312
NCBI-ProteinID: XP_002493050
UniProt: C4R5N5
Position
3:1576431..1578065
AA seq 544 aa
MDIFRVLSRGASLKKTKGAFTDYATVSQSDKDVAASVKSNGGQVDKELDFFHTKKYHLKE
DNSKSDSNTGIEKEQEEEYVPPPPKIVSESDAKAFRKAFKVQVVGNDIPFPIGSFEDLIT
RFQLDKKLLSNLADAKFTEPTPIQCESIPSTLHGHDIIACAPTGSGKTLAFLIPLVQKLG
QNQKNFGIRGLILSPTKELATQIHNELLKLTKGKNLIIGLLSKSLSGKLRSDLIKGNKYD
VMVSTPLRLIEVVRMGKIDLREVKHLVLDEADKLFAPEFLEQTDDVLHNCSNPKLQMSIY
SATIPEEVEELAHSVMKEPIRINIGRKEAANTQIKQKVVYTGSEEGKLVALRQMVQNSEF
KPPVLIFLQSITRAKALFHELIYDKMNVDVIHSERTQIQRDRVVERFQKGDIWVLICTEV
IGRGIDFKGINLVINYDVPTSAEAYVHRIGRTGRAGHTGSAVTFFTKEDSLAIKPIINVL
KQSEQNNGYASWMETEDKLSEKELTKIKKGVERESISTVPTVIREERKRRGVLYESSKRR
KSGK
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggatatctttagagtgttaagtagaggggccagtctgaagaagacaaagggcgccttt
acagactacgcgaccgtctcgcagagtgacaaagatgtcgctgcttctgtcaagtcgaac
ggtggccaggtggacaaagaactagatttttttcatactaagaagtatcatcttaaggaa
gacaactcgaagtcagacagcaacacaggtattgaaaaggaacaagaggaggaatatgta
cctcctcctcctaaaattgtcagcgaatccgatgctaaagcgttcagaaaggctttcaaa
gttcaggtggtagggaacgacattcccttccccattggctcgtttgaggatttgataact
cgattccaattagacaagaaactcctatctaacttggcggacgccaaattcacagaaccc
actccaatccagtgtgaaagtattccttccactcttcatgggcatgatatcatagcctgt
gccccaacaggttcaggtaagactttagcatttttgatcccattggtacagaaattggga
caaaatcagaaaaattttgggattagaggactgattctttctcctacaaaagaacttgcc
actcaaattcacaatgagctgctcaagctgacaaagggcaagaatttgataataggtttg
ctctccaagtcactaagcggaaaattgcgcagtgatctcatcaagggtaataagtacgat
gttatggtgtctacccctttgaggctgattgaagttgtgagaatgggtaagattgatttg
agagaagtcaagcatctcgttttggacgaagcagataagttgtttgccccagaatttttg
gaacagactgatgatgttcttcacaactgttctaacccaaagcttcaaatgtccatttat
tcagctaccatccccgaggaagttgaagagctggctcattcagtaatgaaagagcctata
aggatcaacattggccgcaaggaagctgcaaacacgcaaatcaagcagaaagtagtctac
acaggaagtgaggagggaaagttagttgctttgcgccaaatggttcaaaactcagaattc
aagccccctgtcttgatttttcttcaatcgatcaccagagccaaggcattattccatgag
ctgatctatgacaaaatgaacgtagatgtgattcattccgagcgtacccaaatacagaga
gacagagttgtggaaagattccaaaagggagatatatgggtcttgatctgcacggaagtt
attggaagaggaatcgattttaagggcatcaacctggtcatcaattacgatgtccctaca
tcagctgaagcatatgttcatagaattggtcgtactggtcgggctggccacacgggttca
gcagtgacatttttcaccaaggaggattctttggccatcaaacccatcattaatgtcttg
aaacagagtgaacaaaataatggttacgccagctggatggagactgaagataaactttcg
gagaaagagctgaccaaaatcaaaaaaggtgtggagcgagaatccatcagtaccgttccc
acagtaattagagaggaaaggaaacgaagaggagtactatacgagtcctccaagagacgc
aaatctggtaagtag

  All links  
Gene (13)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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