KEGG   Pleuronectes platessa (European plaice): 128445395
Entry
128445395         CDS       T09923                                 
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
pplt  Pleuronectes platessa (European plaice)
Pathway
pplt04010  MAPK signaling pathway
pplt04020  Calcium signaling pathway
pplt04510  Focal adhesion
pplt04518  Integrin signaling
pplt04519  Cadherin signaling
pplt04540  Gap junction
pplt04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    128445395 (pdgfrb)
   04020 Calcium signaling pathway
    128445395 (pdgfrb)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    128445395 (pdgfrb)
   04519 Cadherin signaling
    128445395 (pdgfrb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128445395 (pdgfrb)
   04540 Gap junction
    128445395 (pdgfrb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    128445395 (pdgfrb)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:pplt01001]
    128445395 (pdgfrb)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:pplt04090]
    128445395 (pdgfrb)
Enzymes [BR:pplt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     128445395 (pdgfrb)
Protein kinases [BR:pplt01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   128445395 (pdgfrb)
CD molecules [BR:pplt04090]
 Proteins
  128445395 (pdgfrb)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set Ig_2 VEGFR1-3_N_Ig-like ig V-set Ig_VEGFR-1-like_5th Adeno_E3_CR1 C2-set_2 Zwei_Ig_N Haspin_kinase ICAM_N AMP-binding_C_2 VEGFR-1-like_Ig-like RIFIN Beta-prop_CGLA
Other DBs
NCBI-GeneID: 128445395
NCBI-ProteinID: XP_053283999
Position
8:18965288..18992694
AA seq 1103 aa
MTRATASILHLTVTTLLCLCAQLHCLEITPNDKELVLAEGSSLTLTCSGFRETTWEFKRD
DVPYFQVEQVQNAGQSYQIVQSSATSSVLTLENVSWKHTGVYLCVDRHTGETKEVVVFVP
DPDVWFIERSHGMVTKTSEESSIPCVVTNPNLNVTLYERDTDMPIRGHYVPSEGYKAPLE
DRTYVCRGELNGDVVESQAFYVFSIAVPEAINAYINTSKTVLKQGEPLTVNCTVHGVELV
YFSWEIPNRHLIEVEPLTDVLSSTNMRSCLIFSRATVAHSGKYVCHVHEGMQDQRDSASV
NITVLERGFVDVKAAEQQNISAKLQENVELRVEIEAYPPPHVRWSKDGATINGDKTITTR
AEHEIRYITTLTLVRVRTEQKGLYTVLVTNGDDAKEVTFDLEVRVPSQIKDLTDLHLPGK
RHLVTCVAEGVPTPTIEWYSCDSMLKCSNQTAVWQLLTPEPEELSIQTNVSYSETRKTSQ
VRSQVTFHKPQQVTVRCQTSNQTGLVDRRDIKLVSGTALFSQVTVLAAVLALLVIVITGF
IILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMSRDNLVLGRTLGSG
AFGRVVEATAYGLAHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLG
ACTKNGPLYLVTEYCRYGDLVDYLHRNKHTFLQDYAEKNQDDGCLISGGSTPLSQRKGYV
SFGSESDGGYMDMSKDEPSNYMPMQEQIDTIKYADIQPSPYESPYQQDIYQEQDDSGLDL
AISDSSILTFDDLLSFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARD
IMHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMN
ELFYSALKRGYRMTKPAHASDEVYDIMRKCWDEKFETRPDFSFLVHSMGNMLADGYKKRY
NQVNDNFLKSDHPAVARTKPRLSSPFPIANPSFGSPASPATLSFPPDPYNQYPGNFRQEA
DAQDVITSYNEYIIPIPDPKPEEAFNDVPSESPASSEALEEESDSVSQDTADTLPEEDRL
EETSERDALLGSSGTPEVEDSFL
NT seq 3312 nt   +upstreamnt  +downstreamnt
atgacgagggcgacggcgtccattctccatctgacagttacaactctcctgtgcctctgc
gcgcagctgcattgcctggagataacacccaacgacaaagagctggtcctggccgagggc
tcctccctcactcttacctgctccggcttcagggagacgacttgggagttcaagagggac
gatgtgccgtatttccaagtggagcaagttcaaaatgcaggccaaagctatcaaatcgtg
caaagcagcgccacatctagcgttttgaccctggagaacgtgagctggaagcacacaggg
gtgtacctgtgcgttgatcgacacactggagaaactaaggaggttgtcgtgtttgtccca
gaccctgatgtatggttcatagagagatcccatggcatggtaactaagaccagtgaggag
agcagcatcccctgcgtggtcaccaatccaaacctcaacgtcaccctgtacgagagggac
actgacatgcccatcagaggacattatgtccccagcgaggggtacaaggcgccgctggag
gacaggacctacgtgtgtcgaggagagctgaacggggacgtggtggagtctcaggccttc
tacgtcttcagcatcgctgtccccgaggccatcaacgcctacatcaatacgtcaaagacg
gtgctgaaacaaggcgaaccgctgacagtcaactgcacggtgcacggagtggagctggtg
tatttctcctgggagatccccaacagacatctgattgaggtggagccgctcacggacgtc
ctgtcgtccaccaacatgcgctcctgcctcatcttctctcgagccacggtggcccacagc
ggaaaatacgtctgccatgtccacgagggcatgcaagaccagagggactctgccagcgtc
aacatcactgtgctcgagcgaggattcgtggacgtgaaggctgccgagcaacagaacatt
tcagccaagctgcaggagaacgtggagctgagagttgagattgaggcctaccctccccct
catgtccgctggagcaaagacggtgccaccatcaacggagacaaaaccatcacaaccaga
gcagagcatgagatcaggtacatcactactctcaccttggtgagggtgaggacagagcag
aagggactctacaccgtcctcgtcaccaatggagacgacgcaaaggaagtaacctttgac
ctggaggttcgagttccctctcagattaaagacctgaccgacctccacctcccagggaag
agacatttggtgacctgtgtagctgagggggtcccaaccccgaccatcgagtggtacagc
tgtgacagcatgctcaagtgtagcaaccagacagcggtttggcagctgctgacgccagag
ccggaggaactgagcatccaaaccaacgtgagctacagcgagactcggaaaaccagtcag
gtccgcagccaggtgaccttccacaagccccagcaggtcactgtccgctgtcagaccagc
aaccaaacaggccttgtcgacaggagagacatcaaactggtgtccggcacggcgctgttc
tcccaggtgacagtgttggctgctgttctcgccctgctagtcatcgtcatcacaggcttc
atcatcctcattgccgtgtggaggaagaaacctcgctacgagatccggtggaaggtgata
gagtctgtgagccaggacggtcatgagtacatctacgtggaccccatccacctgccctac
gatctggcttgggaaatgtcacgagacaacctggtgctgggtcgcactcttggatcagga
gcctttggcagggtggtcgaggcaactgcgtatggtctggctcattcccagtccagcaca
aaggtggcagtgaaaatgctgaagtccacagccaggaggagtgagacccaggccctgatg
tccgagctgaagatcatgagtcacctgggacctcacctcaacattgtgaacctgctcgga
gcttgcactaaaaatgggcctctgtacctggtgacggagtactgtcgttatggcgacctg
gtggactaccttcacaggaacaagcacacgttcttgcaggactacgctgaaaagaaccaa
gatgacggctgcctcatctcgggaggaagcacaccgcttagccagaggaaaggctatgtg
tctttcggaagtgagagcgatgggggctacatggacatgagcaaagatgagccctcgaac
tacatgcccatgcaggagcagatagataccatcaagtacgcagacatccagccttcccca
tatgagtctccctaccagcaagacatctaccaggaacaagatgacagcggattggacctg
gccatcagtgactcttccatcctcaccttcgacgatcttttgagcttcagctaccaagtg
gcgaaggggatggagttcctcgcctccaagaattgtgtccatcgtgacctcgccgccagg
aacgtcttgatctgtgagggcaaactggtgaagatctgtgacttcggcctggccagagac
atcatgcatgactccaactacatctctaaaggcagcaccttcctgcccctgaagtggatg
gcacctgaaagtattttccacaatttgtacacaaccctgagcgatgtgtggtcgtatggc
atacttctttgggagatcttcacactgggaggaaccccctaccctgatctgcccatgaat
gagttattctacagcgctctgaagaggggttaccgaatgaccaaacccgcccacgcctct
gatgaagtctatgatatcatgaggaagtgctgggatgagaagtttgagacgaggcctgac
ttctcctttctggtgcacagtatggggaatatgctagcagacggctataaaaagagatac
aaccaagtcaacgacaacttcctgaagagcgaccacccggctgtcgcccgcaccaagccc
cggctctcctcaccctttcccatcgccaatccatcatttggctcccccgcttcccccgcc
accctctccttccccccggacccctacaaccagtacccaggaaactttagacaggaggcc
gacgcgcaggacgtcataacctcatacaacgagtacatcattccaatcccagaccccaag
ccggaggaagctttcaatgacgtgccatcagagagccctgccagctctgaggctctggag
gaggagagcgactccgtgtctcaggacacggcggacaccctgccagaggaggacaggctg
gaggagaccagcgagagagacgctctgctgggctcatccgggacgcctgaggtagaggac
agcttcctgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (19)   
   Pfam (19)   
All databases (25)   

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