KEGG   Pimephales promelas (fathead minnow): 120473205
Entry
120473205         CDS       T08155                                 
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04010  MAPK signaling pathway
pprm04020  Calcium signaling pathway
pprm04510  Focal adhesion
pprm04518  Integrin signaling
pprm04519  Cadherin signaling
pprm04540  Gap junction
pprm04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    120473205 (pdgfrb)
   04020 Calcium signaling pathway
    120473205 (pdgfrb)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    120473205 (pdgfrb)
   04519 Cadherin signaling
    120473205 (pdgfrb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120473205 (pdgfrb)
   04540 Gap junction
    120473205 (pdgfrb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    120473205 (pdgfrb)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:pprm01001]
    120473205 (pdgfrb)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:pprm04090]
    120473205 (pdgfrb)
Enzymes [BR:pprm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     120473205 (pdgfrb)
Protein kinases [BR:pprm01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   120473205 (pdgfrb)
CD molecules [BR:pprm04090]
 Proteins
  120473205 (pdgfrb)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set VEGFR1-3_N_Ig-like Ig_2 ig Ig_VEGFR-1-like_5th V-set C2-set_2 Adeno_E3_CR1 Ig_6 Ig_MYOM1 RIFIN VEGFR-1-like_Ig-like EcsB
Other DBs
NCBI-GeneID: 120473205
NCBI-ProteinID: XP_039518853
Position
Unknown
AA seq 1066 aa
MKSFTIGRFQLTAMTTGLVLLCLGGSGLELNPSVSEVILSTNSSFTITCSGWRNVSWYYK
REENVPAFHTESRSPTSSVLSLENVTWTHTGVYVCSENGTNETREVAVFVPDPEVWFLNN
DHSMVTKTREESTIPCLVTDPSINVTLYERDTDIVVEGSYNPSVGYTAALDDRNYICRGE
LNGQEKESIPFYVFSIFAPEALDPYINASKTVLKQGETLNVNCTVHGVQLVFFQWDFPNK
DEEDIEPLTDVLSSMSMRSCLNITNASLARSGQYVCHVHEGVGEHTASASIDITVLERGF
VALGSHPDRNISAHLGENVELKVEIEAYPKPIIRWSKEGTVIRGHNTRQEQETRFVSTLT
LVRIRLEQMGLYTVSIQNEDDFKEMTFDLEVKVRPQITELSDHHLPGKKHAVTCVAEGVP
SPSIQWFSCDSMTKCSNRSAVWSPLVEDPERVSIQTNVTYNNTRRIHQAHSQVTFLRPQL
VTIRCEASNERGARARDIRLVNNTLFSQVAVLAAVLALVVIVIISIIILVAVWRKKPRYE
IRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMPRDSLVLGRTLGSGAFGRVVEATAHGLS
RSQTTTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVTEY
CRYGDLVDYLHRNKHSFLQSYADKNHMTNGSLICNDSDVPTGKEYVSFGSECDGGYMDMT
KDEQMEYVPMQELADSIKYADIQPSPYESPYQQDIYQEQGHRVDHSLVISDSPVLSYGDL
VGFSFQVAKGMEFLASKNCVHRDLAARNVLICEGKLAKICDFGLARDIMHDNNYISKGST
FLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKRGYRM
AKPSYANEDIYEVMRKCWDEKYEKRPEFSFLVHTMGNMLSDGYKKKYSQVSDSFLKSDHP
AVARVKPLVPSPFPGAFSLESPTSDETPNPSPQADGDAPHNEYIIPIPDPKPEEEPQYEP
VLTETPSSSLSSDDETVSMETPSTEPEREELLPEHSGSLEVEESFL
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgaagagtttcaccatcggccgcttccagctgactgccatgacaacaggtttggttctg
ctctgtctgggaggttcaggtctggaactcaatcccagcgtttcagaggtaattctctcc
accaactcctccttcaccatcacctgctccggctggaggaacgtctcctggtactacaag
cgggaggagaacgttccggcgtttcacaccgagtcgcgaagtcccacctccagtgttctg
agtctggagaatgtgacgtggacacacaccggggtttatgtgtgctctgagaacgggaca
aatgagaccagagaggtggctgtctttgtgcctgatcctgaggtgtggttcctcaacaac
gatcacagcatggtgactaagacgcgagaggaaagcacgatcccctgtctggtgacggac
ccgtcgataaacgtcacgctgtacgagagagacacagacatcgtggtggagggctcgtac
aaccccagcgtgggctacaccgctgccctggacgacagaaactacatatgcagaggagag
ctgaacggccaggagaaagagtccatcccgttctacgtcttcagtatatttgctcccgag
gctctggatccctacatcaacgcctccaaaacggtcctgaaacagggtgagacgctgaac
gtcaactgcaccgttcacggcgtgcaactcgtcttcttccaatgggactttcccaacaaa
gacgaggaggacattgagcccttgactgatgtcctgtcgtccatgagcatgaggtcctgt
ctcaacatcacgaatgcctcgctggcccgatccgggcagtatgtttgtcatgtgcatgag
ggtgtgggggaacacacagcttcagccagtattgacatcaccgttctggaaagaggtttc
gtggctcttggttcacatccggacaggaacatctcggcgcatctgggagaaaacgtggag
ttaaaggttgagatcgaggcgtatcccaaacccataattcgctggtctaaagaaggcact
gtgattcgaggacacaacacgagacaggaacaggagacccggtttgtcagcactttgacc
ctggtcaggatccgactggagcagatgggtctctacactgttagcatccaaaatgaagat
gactttaaagagatgacctttgacctagaggtgaaagttcgtcctcagataactgaactc
tccgaccatcacctgcctggaaagaagcacgcggtcacctgtgtggcggagggggtgccg
tctcccagcattcagtggttcagctgtgacagcatgaccaagtgcagtaacagaagtgct
gtgtggagccccctggtggaggatccggagagggtctccatccagactaacgtcacctac
aacaacacacgcaggatccaccaagcgcacagtcaggtgaccttcctccggccgcagctg
gtcaccatccgctgtgaggccagcaatgagagaggagctcgagccagagacatcagactg
gtcaacaacacgttgttttcccaggtggcagttctggccgctgtcttagcactggtggtc
atcgtcatcatctccatcatcatcctcgtcgctgtgtggaggaagaagccacggtatgaa
atcaggtggaaggtcattgaatcggtcagtttagatggacacgagtacatctacgttgac
cccattcacctgccttatgacctggcctgggagatgccacgggacagtctggttctgggt
cgtacgttgggatctggagcgtttggccgtgttgtcgaggcgacggcgcacgggctcagc
cgttcccaaaccaccactaaagtggcggtgaaaatgctcaaatcgacggcacggagaagc
gagacacaagctctgatgtctgaactcaagatcatgagtcacctgggtcctcacctgaac
atcgtcaacctgctgggcgcctgcaccaaacaaggtccattatatctggtgacagaatac
tgtcgctatggcgatctggtggactacctgcacaggaataagcacagcttcctgcagtcc
tacgccgacaagaaccacatgaccaacggcagcctgatctgcaacgacagcgacgtgcca
accgggaaagaatatgtgtcgttcggcagcgagtgtgacggaggatatatggacatgact
aaagacgagcagatggaatatgttcccatgcaggagctcgcagactctatcaagtatgca
gatatccagccgtcgccgtacgagtccccgtaccagcaggacatctaccaggagcaaggt
cacagggtggatcactctctggtcatcagcgattctccggttctgagctacggtgacctt
gttggttttagtttccaggtggccaaaggcatggagttcctggcctcaaagaattgtgtc
catcgagatctggcagcaagaaatgttttgatctgtgagggcaaactggccaagatctgc
gactttggactggccagagacatcatgcacgacaacaactacatctccaaaggcagcacg
tttcttcctctgaagtggatggcgccggagagcatctttcataacctgtacaccactctg
agtgacgtctggtcttacggcatcttactgtgggagattttcactctgggaggaacccca
tatccagacctgccgatgaacgagttgttttacagcgctctgaagagaggttaccgcatg
gccaaaccctcatacgccaacgaggacatatatgaggtcatgaggaaatgttgggatgag
aagtatgagaagcgtccagagttctcctttctggtgcacacgatggggaacatgctttca
gacggatataaaaagaaatactctcaggtgagcgacagctttctgaagagcgatcaccct
gcggtggctcgtgtgaagccgctggtcccgtctccgttcccgggtgccttctctctcgag
tctcccacctcagatgaaaccccaaacccgagcccgcaggccgacggagacgctccacac
aacgagtacatcatccccatccccgaccccaagccagaggaggagccccagtacgagcct
gtgctgacggaaaccccctcgagctctttaagttctgatgatgagacggtctccatggaa
accccgagtactgaacccgagcgagaggaactgctgccggaacattctggaagtctagaa
gtggaagagagcttcctgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (17)   
   Pfam (17)   
All databases (25)   

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