KEGG   Phocoena sinus (vaquita): 116749087
Entry
116749087         CDS       T07759                                 
Symbol
FDPS
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
  KO
K00787  farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu00900  Terpenoid backbone biosynthesis
psiu01100  Metabolic pathways
psiu05164  Influenza A
psiu05166  Human T-cell leukemia virus 1 infection
Module
psiu_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    116749087 (FDPS)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    116749087 (FDPS)
   05164 Influenza A
    116749087 (FDPS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:psiu01006]
    116749087 (FDPS)
Enzymes [BR:psiu01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     116749087 (FDPS)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     116749087 (FDPS)
Prenyltransferases [BR:psiu01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   116749087 (FDPS)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 116749087
NCBI-ProteinID: XP_032478954
Ensembl: ENSPSNG00000000654
Position
1:113885154..113895462
AA seq 425 aa
MPPPMLPLSRWLRSVGFFLLPAPCWVPRERWLGSLRQPSLVHGCPVLGAWHSARCWCQAW
TEEPRAFYSSLRMNGDQKLDVYAQERQDFIQHFSQIVKVLTEEDIGHPETGDAIARLKEV
LEYNAIGGKYHRGLTVLVAFRELVEPRKQDAESLWRALTVGWCVELLQAFFVVSDDIMDS
SLTRRGKICWYQKPGIGLDAINDAFLLEACVYRLLKFYCREQPYYMNLIELFLQSSYQTE
IGQTLDLITAPQGNVDLGRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANA
KKILLEMGEFFQIQDDYLDLFGDPSVMGKIGTDIQDNKCSWLVVQCLQRASPEQRQILQE
NYGQKEAEKVARVKALYEEMNLRAVFTQYEEHSYSRIMGLIEQYAAPLPPAIFLGLANKI
YKRKK
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgccaccccccatgctgcccctgtcccgctggctgagatctgtggggttcttcttgctg
ccagccccctgctgggtaccccgggagaggtggctgggttccctacggcagccctccctg
gtgcatgggtgcccagtcctgggggcctggcacagtgcccgctgctggtgccaagcatgg
acagaggagcctcgagcattttactcctccctcagaatgaatggagaccagaaattggat
gtttatgcccaagaaaggcaggatttcatccagcacttctcccagattgtcaaggtgctg
actgaggaggacattggacacccagagacaggagatgctattgcccgactcaaggaggtc
ctggagtacaatgccatcggaggcaagtaccatcggggtttgacagtgctggtagcgttc
cgggagctggtggagcccaggaagcaggatgctgaaagtctctggcgggccctgaccgtg
ggctggtgtgtggaactgctccaagccttcttcgtggtgtcagacgacatcatggattca
tccctcacccgacggggcaagatctgctggtatcagaagccaggcataggtttggatgca
atcaatgatgctttccttctggaagcatgtgtctaccgcctgctgaagttctactgccgg
gagcagccctattatatgaacctgattgagctcttcctgcagagttcttatcagaccgag
atcggacagaccctggacctcatcacggccccccagggcaatgtagatcttggcagattc
actgaaaagaggtacaaatctatcgtcaagtacaagacagctttctactccttttacctt
cctgtagctgctgctatgtatatggcgggcattgatggggagaaggagcatgccaatgcc
aagaagatcctgctggagatgggagagttctttcagatccaggatgattaccttgatctc
tttggggatcccagtgtgatgggcaagatcggcactgacatccaggacaacaagtgcagc
tggctggtggttcagtgtctgcaacgggcctctccggaacagcgccagatcctgcaggag
aactatgggcagaaggaggccgagaaggtggcccgggtaaaggcgctatacgaggagatg
aatcttcgggctgtgttcacgcagtacgaggaacacagttacagccgcattatgggtctc
attgagcagtatgctgcgcccctgcccccagccatcttcctggggctagcaaacaagatc
tacaagcggaaaaagtga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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