KEGG   Polyodon spathula (Mississippi paddlefish): 121330947
Entry
121330947         CDS       T07273                                 
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
  KO
K04852  voltage-dependent calcium channel R type alpha-1E
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010  MAPK signaling pathway
pspa04020  Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    121330947
   04020 Calcium signaling pathway
    121330947
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pspa04040]
    121330947
Ion channels [BR:pspa04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   121330947
SSDB
Motif
Pfam: Ion_trans GPHH Ca_chan_IQ PKD_channel DUF3084
Other DBs
NCBI-GeneID: 121330947
NCBI-ProteinID: XP_041133885
Position
18:complement(17908897..18058424)
AA seq 2165 aa
MILASIIANCIVLALEQHLPGDDRTPMSKRLEKTEPYFIGIFCLEAGIKVIALGFVFHKG
SYLRNGWNVMDFIVILSGILAYAGAHINTRVDLKTLRAVRVLRPLKLVSGIPSLQIVLKS
IMKAMIPLLQIGLLLFFAILMFAIIGLEFYSGKLHRTCGLRANLTDLKDFEALDESELDF
PCRDKGCPENYECNKPWIGPNNGITQFDNILFALLTVFQCITMEGWSTVLYNTNDALGPT
WNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRA
WIDRAEEVMLAEENKNSATSALEVLRRATIKKSRMETIPREPSEDQYADISSVGIPLARA
SIKSTKRDGTSYFRRKERLLRISVRHMVKSHTFYWIVLSLVALNTLCVAIVHHKQPQWLS
TFLYYAEFLFLGLFLTEMFLKMYGLGPRLYFHSSFNRFDCGVIVGSIFEVIWGFFRPGMS
FGISVMRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFILVFALLGMQLF
GGRFIFEDTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKYGMWSSIYFIVLT
LFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQKAKEVSPMSATNMMASE
RKTLLTRKKTIRRHRHTIHIKAARASEALPDPESLNGPPNYFLSRRERRRRLTMSVWEQR
TSQLRRRRQMSSREALYSSPTEESERGASCHRHRKTESLRRDPVIPDIQPLPLQMPMPLP
GPEETLGVTNHCQAHSKEGHQSPRANGERGHRASRKAHGPLPEGLAPEEGGRVRRSGRHQ
RKERGEGKTKDSSHSEGSRSVSRERRTEEGRGWGGGGEAGEPKVLGGRTEEDTGSRSLEA
VAGLPDPLPMTNSPRAAARESTRAALQQSGEAAGSTAPVDTTVEIEPEINPSLLNLVKPT
GQTSVAVEVTDTHTPLELLPITVNSKEAEASIAVNAEGGLSGARTVPPHSMFIFSATNPI
RRACHYIVNLRYFEMCILLVIVASSIALAAEDPVSTGSKWNKVLRYFDYVFTAVFTFEMI
IKMIDQGLILHDGSYFRDLWNILDFIVVVGALIAFALANVMGTTKGRDIKTIKSLRVLRV
LRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLVMFIFAVIAVQLFKGKFFYCTDES
KDTEKECRGYYLEFDKDKMDKMEKKKREWRHHDFHYDNIIYALLTLFTVSTGEGWPQVLQ
HSVDVTEEDRGPSRGNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSL
EKNERACIDFAINAKPLTRYMPQNRQTFQYRVWHFVVSPSFEYTVLAMIALNTVVLMMKY
YSAPAAYDHVLKHLNTAFTILFSLECILKIMAFGFLNYFRDTWNIFDFITVLGSITEIIL
ADTQLLNTFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIY
AIIGMQVFGNIKVRNDSQINHHNNFRTFFSALMLLFRSATGESWQEIMLSCTAGKPCETH
NGNSSSSSATNETCGTDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHH
LDEFVRIWAEYDRAACGRIHYTDMYEMLMHMSPPLGLGKKCPSKLAYKRLVLMNMPVDEE
MTVHFTSTLMALIRTALEVNIARGGEDRQQMDAELQKDISLIWPHLSQKSLDYLVPIHKA
SDLTIGKIYAAMMIMDYYKLNKAKKQRQQLEEQKHAPMFQRMDASSLPQEILSSAKALPF
LQHSPSTGLGEFVALSPLSPQERFVSPRSPDLQRREDFQEHHTLMSERRELPRQVFPSNR
QCLPLEVPGRGISIRASSMPRLAVEPQVMTESNSMKRSFSTIGAQRVNGLWLDEYSLERV
GPAELHRQQHRSYRPPGLKSEHRQACDRERGRSKERRHLLSPDVSRCNSEERSPSGQPPT
RERAQSRSPSQGRARTIHTQGPNSDSPVPSTSESSTPNHGRRQLPQTPSKPRPHISYSPL
VRRSTNPSPPANGSTPRTREPAATGGQCAGEGQSSHRSTPHRYISEPYLPLHEDYNSPDS
AGADETLTFEAAVATSFGHSNTISSAPPHRHSWQVPNGHFRNRLIQSSSVTGCELFSDTD
EDDRC
NT seq 6498 nt   +upstreamnt  +downstreamnt
atgattctggccagtatcattgccaactgcatcgtcctggctttggagcagcatcttcca
ggagatgacagaacacctatgtcaaagagactggaaaagactgaaccatactttataggg
atcttctgccttgaagcggggattaaggtcatcgccctgggtttcgtgttccataaaggc
tcctacctgcggaacggctggaacgtgatggatttcattgtgattctcagcgggatcctg
gcatatgctggtgctcacatcaacacacgtgtggacttgaagacactgagagcagtcaga
gtgcttcggcctctcaaactggtctcaggcattcccagtctacagattgtgctgaagtcc
ataatgaaagccatgatacctctgctgcagatcgggctgctccttttctttgccattctc
atgtttgcaatcattggactggagttctacagtggcaagttgcaccggacttgcggcctt
cgtgccaacctgacagatttgaaagattttgaagcccttgatgagtcggagttggacttc
ccctgccgagacaaaggctgtcctgagaactatgaatgcaataagccctggatcggtcct
aacaacgggatcacgcagttcgataacatcctgtttgctttgctgactgtcttccaatgc
atcactatggagggctggtccacagtcctctacaataccaatgatgccttaggcccaacc
tggaactggctgtatttcatccctctgatcatcatcggatcctttttcgtactaaacctt
gtgctgggggtcctgtctggggagtttgccaaagagagggagagagtggagaaccggagg
gcgttcatgaagctgaggagacagcaacaaattgagcgcgagctgaatgggtaccgagcc
tggatcgaccgagcagaagaagtaatgctagcagaagaaaataaaaattcagccacatcg
gcactggaagtgctgaggagagctaccatcaaaaagagtcgcatggagacgattcctcgg
gaacccagcgaggaccagtatgctgacatctcatctgtgggtatccccctagccagagcc
agcattaagagcactaaacgggacggcacctcgtatttccgtcggaaggagcgcctgctg
aggatctctgtgcgccacatggtgaaatcacacaccttctactggattgtgctgagcctg
gtggccttgaacacgctgtgtgtagctattgtgcaccacaagcagccacagtggctctcc
acattcctctactatgcagagttcctcttcctggggctgtttctcactgagatgttctta
aagatgtacggcctgggaccacggctctacttccactcctctttcaaccgctttgattgc
ggagttattgtcggcagtatattcgaggtgatctggggatttttccggccgggaatgtct
tttggaatcagcgtcatgcgggctctgcgtctgttgaggatttttaagattacaaagtac
tgggcatcgcttcggaacctggtggtgtctctcatgagctccatgaaatccatcatcagc
ctactcttcctgctcttcctcttcatcttggtcttcgctctgctggggatgcagctcttt
gggggcaggttcatttttgaagacactccgacaaactttgatacattccccgcagcaata
atgaccgtgttccagatcctgacgggagaggactggaatgaggtgatgtacaatgggatt
cgttctcaaggaggagtgaagtatggcatgtggtcctctatatatttcattgttctgaca
ctcttcggcaactacacactgctcaatgtgttcttggccatcgcggtggacaatctagcc
aatgctcaggagctgactaaggatgagcaggaggaagaagaggccttcaaccagaagcac
gctctgcagaaagcaaaggaagtcagccccatgtcagcaacaaacatgatggcttcagag
agaaaaaccttgctcactaggaaaaagacaattcgcagacaccggcacaccattcatatc
aaagctgccagagcttcagaagcactccctgatcccgagtctctcaatggccctcctaac
tattttctgtctagaagggagagaagaaggaggctcaccatgtcagtttgggagcagaga
accagccagctgaggaggcgaaggcagatgtccagcagagaggctctctactccagcccg
accgaggagtccgagaggggagccagctgtcatcgacacaggaagactgagagccttcgt
agagatcctgtgatcccagacatacagccactacccctgcaaatgccaatgccactgcca
ggccctgaagagacgctgggggtgaccaaccactgccaagcacacagcaaggagggccac
cagagccccagagcaaatggagagagaggacaccgagcaagccgcaaggcccatggcccc
ctgcctgaggggttagcccctgaagagggggggagggtgaggaggagcgggcggcaccag
cggaaggagaggggagagggaaagaccaaggactcctctcacagtgaaggcagccgctct
gtcagcagagagagaagaacagaggagggaagaggatggggaggtggaggagaggcaggg
gagcccaaggtcctggggggaaggacggaagaggacactgggagcagatcactggaagct
gtggcaggtctccccgaccccctgcccatgacaaactcccccagagcagcggcgcgagag
agcaccagagccgccctgcagcagagtggggaggcagcagggagcacagcccccgtggac
actacagtggagattgagccagagataaaccccagcctgctgaacctcgtgaaaccaacg
ggtcagaccagcgttgccgtcgaggtgactgacacacatacgccactggagctgctgcct
atcacagtcaacagcaaggaagcagaagcctcgattgcagtgaatgcagagggggggctg
agtggagcgagaaccgtcccaccacacagcatgttcatcttcagcgccaccaaccctatc
agaagagcctgccactacattgtaaacctgcgctactttgagatgtgcatcctcctggtc
atcgtggcaagcagcatcgccctggcagcagaggatcctgtttccactgggtccaagtgg
aacaaagtgctgcgttactttgattatgttttcaccgccgtctttacctttgagatgatt
ataaagatgatcgatcagggtctgattctacatgacggctcatacttccgagacctgtgg
aacattctggatttcatcgtggttgtgggagcgctcattgccttcgctttagcgaatgtg
atggggactaccaaaggacgagatatcaagactatcaagtctttgagagttctacgtgtc
ctccggcccctgaagaccatcaagagactgccaaagctcaaggcagtgtttgactgcgtg
gtgacttctctaaagaatgtctttaacatcctgattgtctacaaacttgtcatgttcatc
ttcgctgtcatcgcggtacagctcttcaaagggaagttcttctactgcaccgacgagtct
aaggacactgaaaaagagtgcaggggctactaccttgaatttgataaagacaaaatggac
aagatggagaagaagaagagggagtggaggcatcatgatttccactatgacaacatcatc
tacgcactcctgaccctcttcactgtctccaccggggaaggctggccgcaagtcctgcaa
cactcagtggatgtaacggaggaggaccgtgggccaagtcgagggaaccgcatggaaatg
tctatcttctatgtagtgtattttgtggtcttccccttcttcttcgtaaacatctttgtg
gctttgatcatcatcactttccaggagcagggggacaagatgatggaggagtgcagcctg
gagaagaacgagagagcctgcattgactttgctatcaatgccaagcccctgacgcgctac
atgcctcagaacaggcaaacctttcagtacagagtctggcactttgtcgtgtccccctcc
ttcgagtacactgtgctcgccatgatcgccctcaataccgtggtgctcatgatgaagtat
tactcagctcctgccgcctatgaccacgtattgaagcacctgaacactgcattcaccatc
ctcttctcactggagtgcatcttgaaaatcatggcttttggatttttgaactacttccgg
gacacgtggaacatatttgacttcatcacggtcctgggcagcattactgagatcatcctg
gccgacacgcagctcctcaacacattcaacatgagtttcctgaagctgttccgcgctgcc
cgactcatcaagctcctgagacagggctacaccatccgcatcctgctttggacattcgta
cagtccttcaaggctctgccatatgtgtgcctgctgatagcaatgctcttcttcatatac
gcaattatcggaatgcaggtatttgggaacatcaaggtgcggaacgattctcagataaac
caccataacaactttaggaccttcttcagcgcgctgatgcttctgttcaggagtgccaca
ggcgagtcctggcaggagatcatgctgtcctgcacagcagggaagccatgtgaaacccac
aacggcaacagcagcagcagctctgccaccaacgagacctgtggcacggactttgcatac
ttctactttgtctccttcatcttctttagctcctttctgatgctaaacctgtttgtggct
gtcatcatggacaactttgaatacctgactcgagactcctccatcctggggcctcaccac
ctggatgaatttgtgcgaatctgggcagagtatgatcgggctgcatgtggtcgtattcat
tacactgacatgtatgagatgctgatgcacatgtctccaccactaggcctcggaaagaaa
tgtccttccaaacttgcttataagagattggtgctgatgaacatgcctgttgatgaggag
atgacagtacattttacctctactttgatggctcttataagaacagcccttgaagttaac
attgcaagaggtggcgaggacaggcagcagatggatgcagagttgcaaaaggacatcagt
ttgatctggcctcacctttcacagaagtcactggattacttggttccgatacataaagcc
agcgacctgaccatcgggaagatctacgcagccatgatgatcatggactactataagctg
aacaaggccaagaaacagaggcagcagctggaggagcagaaacatgccccaatgttccag
cgcatggacgcctcatccctccctcaggagatcctctccagcgccaaggctctgccattc
ctgcaacacagccccagcaccggcctgggagaatttgtggcactcagccccctgtcccct
caggagaggtttgtgagtcccaggtctcccgacctccaaaggagagaagacttccaggag
caccacactctgatgtccgagcggagggagttacctaggcaggtttttcccagtaacaga
cagtgcctccccttggaagtgccggggcggggcatttcaatacgggcctcttccatgcct
cgactagcagtggaaccacaggtgatgacagagagcaactcgatgaagcgctccttctcc
acgatcggagcccagcgtgtgaacgggctgtggctggacgagtactccctggagagagtg
ggtcctgccgagctgcacagacagcagcaccggagctaccgaccgcctggtttaaagtca
gagcaccgccaagcttgtgaccgagagcggggccggtctaaagagcgcaggcacctgcta
tctccagacgtgtcccgctgcaactcagaggagaggagcccctcgggacagccccccacc
cgggagagagcgcagtccagatccccgagccagggtcgagcacgcaccatccacacacag
ggccccaactcggacagcccagtcccctccacctctgagtccagcactcccaatcatggg
cgccgccagctgccccagaccccctccaaaccccgaccccacatctcctactcgcccttg
gtgcgccgctccaccaacccctcccccccagccaacggcagcaccccacggacccgagag
ccagccgccacagggggacagtgtgctggagagggccagagcagccaccgctccacccct
caccgctacatctccgagccctacctccctctgcacgaggactacaacagccccgattca
gccggagcagacgagaccttgacctttgaggctgcagtggccaccagcttcgggcactcc
aacactatcagctcagcccctccacataggcacagctggcaggtccccaatggccacttc
cgcaaccggctcatccagtccagctcggtaaccggctgtgagctctttagcgacacggac
gaggatgaccgctgctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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