KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130200179
Entry
130200179         CDS       T09868                                 
Symbol
cacna1db
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D isoform X1
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010  MAPK signaling pathway
pswi04020  Calcium signaling pathway
pswi04218  Cellular senescence
pswi04260  Cardiac muscle contraction
pswi04261  Adrenergic signaling in cardiomyocytes
pswi04270  Vascular smooth muscle contraction
pswi04530  Tight junction
pswi04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    130200179 (cacna1db)
   04020 Calcium signaling pathway
    130200179 (cacna1db)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    130200179 (cacna1db)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    130200179 (cacna1db)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    130200179 (cacna1db)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    130200179 (cacna1db)
   04261 Adrenergic signaling in cardiomyocytes
    130200179 (cacna1db)
   04270 Vascular smooth muscle contraction
    130200179 (cacna1db)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pswi04040]
    130200179 (cacna1db)
Ion channels [BR:pswi04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   130200179 (cacna1db)
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel PFF1_TM
Other DBs
NCBI-GeneID: 130200179
NCBI-ProteinID: XP_056280192
Position
9:complement(8958057..9038396)
AA seq 2227 aa
MQEADEQSEGAQYASNKRTTPPGDASESQPRLHQLHPPEPLHAPHSTGKPVGSSCGLFGA
NSGVQDSGGTGSGVSPVLAWHAAISAARQVQGDVAKPDMSMQPTVCTTGPPPVGSLAQRK
RQQYAKSKKQGGSTNNRPPRALFCLTLNNPIRRACISLVEWKPFDIFILLSIFANCVALA
IYIPFPGDDSNSTNQELETVEYAFLIIFTIETFMKIIAYGLVMHQNSYVRNGWNMLDFVI
VVVGLFSVVLEMITKDVDSNGQSGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSI
IKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCYMMQTGALAEEEATPCAVSGHGR
HCLLNGTSCKEGWQGPNNGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDAMGFELPWV
YFVSLIIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQ
AEDIDPENEEEGDEEGKRNRVTLADLTEKKKGKFGWFTQSTETQASMPSETESANTDNHN
GEENKSPCCGPLCQQITKSKFSRHWRRWNRFCRRKCRAAVKSVTFYWLVIILVFLNTLTI
ASEHYNQADWLTKVQDVANKVLLAMFTMEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGIV
ETILVELAFMSSLGISVFRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLF
IIIFSLLGMQLFGGKFNFDETVTKRSTFDNFPQALLTVFQILTGEDWNTVMYDGIMAYGG
PASSGMVVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEEEAKKRKNSAKD
ISTEKKKVEIIDVKDGQTKCVQAPAEVLLEEEKESYPAIDSLACDDDDNNAVLPEVLPGP
RPQRLSEFSIKEKTPPIPVGSAFFIFSSTNPFRVFCHKLINHQIFTNLILVFIMLSSISL
AAEDPIRNFSARNIILGYADYVFTSIFTFEILIKMTAFGAFLHKGAFCRNYFNLLDLLVV
GVSLVSFGLQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTT
LLQFMFACIGVQLFKGKFFRCTDDAKSSPDDCKGTYILYNNGDAALPMVKERIWYNSDFN
FDNVLMAMMALFTVSTFEGWPTLLYKAIDSNRENMGPIYNYRIEISIFFIVYIIIIAFFM
MNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVN
STGFEYVMFVLIIINTLCLAIQHHGQSHLFNYAMDILNMVFTGVFTVEMILKLIAFKPRN
YFADAWNTFDALIVVGSVVDIAITEINNTEDSARISITFFRLFRVMRLVKLLSRGEGIRT
LLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKIAMVDGTQINRNNNFQTFPQAVLM
LFRCATGEAWQEIMLACLPGKLCDPESDYNPGEEKTCGSGFAIIYFISFYMLCAFLIINL
FVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGF
GKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIK
KIWKRTSMKLLDQVAPPSGDDEVTVGKFYATFLIQDYFRKFKRRKEQGLVGRRSWERLNT
TMALQAGLRTLHDIGPEIRRAISCDLQEAGLVDAIGEEAEDIYRRNGGLFGNHIGADQQG
CFHPTTVTQRPLQVLPFSCSASTESTQTGRRASDAERGEDVEMNSSPIQYNHHDHTPHPY
HYPHFVSTCHQSPIPSNANLNNANVPSLSSMPNGRQQKCLLRGERPSSTKKGPSVSTYSK
GVHDKLWKSHSPRTRYYEAYIRSESGGGLYSTIRREEPGGGDSDDERGSGEYFSGEEFHE
DDILLTKDRLSNKDQHDEDGDCDLGVSSGDHQSDGCYDDDQQPICQVGRRSPRRWLLPSP
QASNRPTFSFECLRIRSSQDDAPPSPSCTALPLHLVQQQVMAVAGFDASRIHRLSPTGSL
RSWVTPPASPISRGCSPCYAPLIQVDWRSPGSVSSLPGAVTRSSWYTDGQDGLPGLSRSP
SHLQLPAERCSHILQKRGSANSVVEAVLISEGLGKYARDPKFVTATKHEIADACEMTIDE
MESAASNLLNGSLDNGTAGGTGSVSSDLLATTHVRDRSIQDYSDEEPYVALKCEEDLTDE
MICITSL
NT seq 6684 nt   +upstreamnt  +downstreamnt
atgcaagaagcagatgaacagtctgaaggggcacagtatgccagcaacaaaaggaccact
ccccccggtgatgcctcagaaagccaaccccgtctgcaccagctccatccccctgagccc
ctgcatgccccgcatagcaccggcaaacccgtcggctcctcttgtggtctctttggggcc
aacagtggcgttcaggactccggtggcactggttcgggtgtcagcccggtcctcgcttgg
catgccgccattagtgctgctcgccaagtgcagggcgatgtcgcgaagcctgacatgagt
atgcagcccacagtttgcaccacgggaccacctcctgtgggctcactggcgcagaggaag
aggcagcagtacgccaaaagcaaaaagcagggaggatctaccaacaacaggccacccaga
gctctgttctgcctcaccctcaacaacccgatccgcagggcctgcatcagcctggtggag
tggaaaccgtttgatatctttatactgctgtctatttttgccaactgtgtggccttagcc
atctacatccccttccccggagacgactccaactctaccaaccaagaactggaaacagta
gaatatgccttcctgatcattttcacgatagagacatttatgaagattattgcttatggt
ctggtcatgcaccaaaactcctacgtcagaaatggctggaacatgctggactttgtcatc
gtcgtcgtggggttgttcagtgtggttctggagatgataaccaaagacgttgattctaac
ggccagtctggaggcaaacctggggggtttgatgtcaaggccctccgagctttccgcgtg
ctacgaccacttcgccttgtctctggagttcctagtttacaggtggttttaaactccatt
attaaagccatggttcccctgcttcacatcgctctgctggtcctctttgtcattatcatc
tacgccatcatcgggctggagctcttcattggcaaaatgcatgcaacatgctacatgatg
caaacaggtgccctggcggaagaagaggccacgccatgtgcggtctcagggcacggccgc
cattgcctgctcaatggtacgtcttgcaaagagggctggcaaggccccaacaacggcatc
accaacttcgacaactttttgtttgccatgctcactgtgttccagtgcatcaccatggag
ggctggaccgacgtcctctactggatgaacgatgcgatgggctttgagctgccctgggtc
tactttgtcagtctgatcatctttggatccttctttgttctcaatttggttttgggtgtg
ttgagcggagagttttccaaagagcgagaaaaggccaaggctcggggagatttccagaag
ctacgtgagaagcagcagttagaggaagacctgaagggctacctggactggatcacccag
gcagaggacattgaccctgagaacgaggaggagggggacgaggagggcaagcgtaaccgg
gtcacactggctgacctcactgagaagaagaaaggaaagtttggctggttcactcagtcc
acagagacacaggcgagcatgcccagtgagactgagtcggcaaacacagacaatcacaac
ggagaggaaaacaaatccccctgctgtggtccgctatgtcaacaaattactaagtcaaag
ttcagtcgtcattggcgacggtggaaccgtttctgccgcagaaagtgtcgagcagccgtg
aagtccgtgacgttttattggctggtcatcatcttggtgttcctcaacaccctcaccatt
gcctctgagcactacaaccaggcggactggctgaccaaagtccaggacgtagccaacaag
gttctcctggcaatgttcaccatggagatgctggtgaagatgtacagtctggggctgcag
gcgtacttcgtgtccctgtttaaccgctttgactgtttcgtggtgtgcggcggcatcgta
gagaccatcctggtggagctggccttcatgtcttcgctgggcatctctgtcttccgttgc
gtacgactgcttcggatcttcaaggttacgcggcattgggcatctctcagtaacctggtg
gcctcgctgctcaactccatgaagtccatcgcctccctgttgctgctgctcttcctcttc
attattattttctccttgcttggcatgcagctctttgggggcaagttcaactttgacgag
actgtgaccaaaaggagcacgtttgataacttcccccaggccctgctcactgtgttccag
atcttgacaggagaagactggaacacggtgatgtatgatggtatcatggcatacggcggt
ccggcctcctctggaatggtggtctgcatttacttcattatcctctttatctgtggaaac
tacatcctgctaaacgtcttcttggccatcgccgttgacaacctggcagacgcggagagc
ctcaacacagcacagaaggaggaagaggaggccaagaagaggaagaatagtgccaaagat
attagcactgaaaagaagaaagttgaaatcatagatgtcaaggatggacagaccaagtgt
gtgcaggcgccagcagaagtcttgttggaggaagaaaaggagtcatatcctgccatcgac
tcactggcttgtgatgatgatgacaataatgccgttctcccagaagtcctgccagggccc
cgccctcagaggctgtcagaattcagcatcaaagagaagactccgcccatcccggtgggc
agcgccttcttcatcttcagcagcactaacccgttccgtgtgttctgccataagctgatc
aaccatcagatcttcaccaacctaatcctggtcttcatcatgctcagctccatctctctg
gctgccgaggacccaatacgcaacttctctgctcgcaatatcatcctaggctatgcagac
tatgtcttcactagtatttttacatttgagatccttattaagatgacagcgtttggagcg
tttcttcataaaggggcgttttgtagaaactacttcaaccttttagacctcctggtcgtc
ggtgtgtctctggtctcctttggcctccagtcctctgctatttcagtggtgaagattctc
cgtgttctgagagtcctccgtccgctcagggctatcaacagagccaagggactgaagcat
gtggtccagtgtgtgttcgtggccatcaggaccatcggcaacatcatgatcgtcaccacg
ctgctgcagttcatgttcgcgtgtatcggagtgcagctcttcaaggggaaattctttcgc
tgcaccgatgatgccaagtccagtccagacgactgcaagggaacctacattctctacaac
aacggggacgcggcgctgcccatggtgaaggagaggatctggtacaacagcgacttcaac
tttgacaacgtcctcatggccatgatggctctgtttactgtctccacattcgaagggtgg
cccactctgctctacaaggccatcgactccaacagagagaacatgggtcctatctacaac
taccgcatcgagatctccatcttcttcatcgtctacatcatcatcatcgccttcttcatg
atgaacatctttgtcggtttcgttattgtcacctttcaggagcagggggagaaggagtac
aagaactgtgagctggacaagaaccagcgtcagtgtgtggaatatgctctcaaagctcgt
cctctgcggcgctacatcccaaaaaacccttaccagtacaagttctggtatgtggtcaac
tctacaggctttgagtacgtcatgtttgtcctgatcatcatcaacaccttgtgtctggcc
attcagcaccatggtcaatcccatctatttaattatgccatggacatcctcaacatggtc
ttcactggggttttcactgtggagatgatcctcaagctcatcgccttcaaacccagaaac
tattttgctgatgcatggaacacgtttgatgccttaattgttgtgggtagcgtggttgac
attgccatcactgagatcaataacacggaggacagcgctcgcatctccatcaccttcttc
cgcctgttcagagtgatgcgattggtcaaacttctgagcaggggggaaggcatcaggact
ctgctgtggaccttcatcaagtctttccaggctcttccctacgttgcactcctgatagcc
atgctgttcttcatctatgctgtaatcgggatgcaggtgtttgggaaaatagccatggtg
gatggaactcaaatcaaccgcaacaacaactttcaaacctttcctcaagctgtgctgatg
ctcttcaggtgtgccacaggtgaggcctggcaggagatcatgctggcctgtctgccgggg
aagctgtgtgatccggagtcggactacaaccccggagaggagaaaacttgcggcagcggc
ttcgccattatctacttcatcagcttctacatgctctgtgccttcctgatcatcaacctg
tttgttgccgtcatcatggataactttgactatctgacccgtgattggtctattcttggg
ccgcatcacctggatgagtttaaaaggatctggtccgaatacgaccctgaagccaagggc
aggataaagcacctcgacgtggtgactctgctgaggaggatccagcccccgctgggcttt
ggcaagctgtgccctcacagggtggcctgtaagcgtctggtggccatgaacatgcccctc
aacagtgacgggaccgtcatgtttaatgccaccttgtttgctctggtccgcactgccctc
aagattaagactgagggtaatctggagcaagccaatgaggagctcagagctgtgattaag
aagatttggaaaaggacaagcatgaagctgctggaccaagtagcgcccccttccggcgat
gacgaggtaacagtggggaagttctatgccaccttcctgatacaggactacttcaggaag
ttcaagaggcgcaaagagcaaggtcttgtaggaaggcgctcgtgggagaggctgaacaca
accatggctctgcaggccggcctgcgcacgctgcatgacattggaccagagatccgtcga
gccatatcatgtgacctgcaagaggcggggctagtagatgctattggagaggaagcagag
gacatctacaggcgtaacggcggcctttttgggaaccacatcggtgctgatcagcaaggt
tgctttcacccgaccacggtcacccagcggccgctacaggtcctgcccttctcctgcagt
gcctcaactgaatccacccaaacaggcaggagagccagtgacgccgagagaggagaggac
gtagagatgaactcctcacccatccaatacaaccatcacgatcacaccccgcatccgtat
cattatcctcacttcgtttccacttgccatcaatcgccaatcccctccaatgccaacctc
aacaatgccaacgtgccctcactgtcctccatgcccaacgggaggcagcagaagtgcttg
ctaaggggagagcgtccatcctccaccaaaaagggaccatcggtgtcaacttacagcaaa
ggagtgcacgacaagctttggaagtcacactctccgaggacgcgctactatgaggcctac
attaggtcagaaagcggcggtgggctttactccactattcgccgagaggagcccgggggt
ggcgacagcgatgacgagcgagggtcgggagagtacttcagcggggaggagtttcacgaa
gacgacatcctgctcactaaggacaggttgtccaacaaggaccaacatgatgaagatggt
gactgtgaccttggggtttccagcggcgaccaccagtctgatggttgttatgacgatgac
caacagccgatctgccaagttggcaggcggtcgcccaggaggtggctcctcccgtcacct
caagcgtccaacagaccgacattcagctttgagtgtcttcgtataagaagcagtcaggat
gacgcccctccctctccgtcctgcacagctcttccactacacctggtgcagcagcaggtc
atggcggtggccggtttcgacgccagcagaattcaccgtctgtcgccgacggggtcgctt
cgctcctgggtcacgcctcctgcctcacccatcagccgcggctgctcgccttgctacgca
ccgctcatacaggtggactggcgcagccccggcagcgtcagcagcctccccggagcagtg
acgaggagttcttggtacacagacggtcaggacgggcttcccggcctcagccgctctcca
tcacatctgcagcttcctgcagaacgctgctcacacattctgcaaaagagaggcagcgcc
aacagcgtggtggaggctgtgttgatctctgagggtttggggaaatacgccagggacccc
aagtttgtgacagcaaccaaacacgaaatcgcagatgcctgcgagatgaccattgatgag
atggagagtgccgccagcaacctgctgaacgggagtctggataacggcaccgcgggggga
acgggcagcgtcagctctgacctgctggccaccacgcatgttagagaccgcagtatccag
gactacagcgacgaagagccgtacgtggctctgaaatgcgaggaggacctaaccgatgag
atgatatgcatcacgtcgctatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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